ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2R20:B3:B2

Extra

PDB:
ATOM 1 O3' G A 2 -15.705 1.523 -4.288 1.00 11.85 O
ATOM 2 P U A 3 -14.834 1.655 -2.941 1.00 11.71 P
ATOM 3 OP1 U A 3 -15.154 2.974 -2.335 1.00 13.74 O
ATOM 4 OP2 U A 3 -13.426 1.314 -3.243 1.00 12.44 O
ATOM 5 O5' U A 3 -15.410 0.508 -2.002 1.00 9.82 O
ATOM 6 C5' U A 3 -16.746 0.568 -1.524 1.00 9.70 C
ATOM 7 C4' U A 3 -17.056 -0.653 -0.696 1.00 9.54 C
ATOM 8 O4' U A 3 -16.998 -1.839 -1.535 1.00 10.22 O
ATOM 9 C3' U A 3 -16.071 -0.985 0.410 1.00 9.74 C
ATOM 10 O3' U A 3 -16.230 -0.158 1.552 1.00 9.56 O
ATOM 11 C2' U A 3 -16.434 -2.434 0.685 1.00 10.06 C
ATOM 12 O2' U A 3 -17.646 -2.553 1.407 1.00 10.62 O
ATOM 13 C1' U A 3 -16.608 -2.953 -0.742 1.00 10.50 C
ATOM 14 N1 U A 3 -15.323 -3.465 -1.235 1.00 10.26 N
ATOM 15 C2 U A 3 -14.974 -4.732 -0.834 1.00 9.56 C
ATOM 16 O2 U A 3 -15.707 -5.422 -0.152 1.00 10.84 O
ATOM 17 N3 U A 3 -13.738 -5.157 -1.254 1.00 9.93 N
ATOM 18 C4 U A 3 -12.836 -4.448 -2.023 1.00 9.74 C
ATOM 19 O4 U A 3 -11.726 -4.933 -2.259 1.00 11.37 O
ATOM 20 C5 U A 3 -13.285 -3.149 -2.423 1.00 9.83 C
ATOM 21 C6 U A 3 -14.488 -2.714 -2.029 1.00 9.43 C
ATOM 22 P U A 4 -14.948 0.205 2.451 1.00 9.73 P
ATOM 23 OP1 U A 4 -15.390 1.292 3.362 1.00 10.33 O
ATOM 24 OP2 U A 4 -13.762 0.418 1.586 1.00 10.86 O
ATOM 25 O5' U A 4 -14.691 -1.112 3.308 1.00 9.67 O
TER

ATOM 1 O3' C B 1 -12.231 0.756 -9.260 1.00 13.29 O
ATOM 2 P G B 2 -12.041 0.984 -7.679 1.00 13.18 P
ATOM 3 OP1 G B 2 -11.905 2.451 -7.478 1.00 15.65 O
ATOM 4 OP2 G B 2 -10.979 0.078 -7.181 1.00 14.02 O
ATOM 5 O5' G B 2 -13.431 0.518 -7.055 1.00 12.98 O
ATOM 6 C5' G B 2 -14.620 1.258 -7.301 1.00 11.94 C
ATOM 7 C4' G B 2 -15.786 0.639 -6.568 1.00 10.76 C
ATOM 8 O4' G B 2 -16.068 -0.679 -7.119 1.00 11.89 O
ATOM 9 C3' G B 2 -15.576 0.356 -5.090 1.00 11.67 C
ATOM 10 O3' G B 2 -15.705 1.523 -4.288 1.00 11.85 O
ATOM 11 C2' G B 2 -16.672 -0.668 -4.837 1.00 10.89 C
ATOM 12 O2' G B 2 -17.962 -0.091 -4.832 1.00 12.79 O
ATOM 13 C1' G B 2 -16.530 -1.539 -6.084 1.00 12.22 C
ATOM 14 N9 G B 2 -15.538 -2.591 -5.889 1.00 10.79 N
ATOM 15 C8 G B 2 -14.251 -2.614 -6.367 1.00 10.71 C
ATOM 16 N7 G B 2 -13.594 -3.688 -6.022 1.00 10.95 N
ATOM 17 C5 G B 2 -14.504 -4.422 -5.272 1.00 9.71 C
ATOM 18 C6 G B 2 -14.363 -5.679 -4.627 1.00 10.09 C
ATOM 19 O6 G B 2 -13.377 -6.424 -4.599 1.00 9.65 O
ATOM 20 N1 G B 2 -15.528 -6.047 -3.962 1.00 9.38 N
ATOM 21 C2 G B 2 -16.684 -5.306 -3.924 1.00 9.77 C
ATOM 22 N2 G B 2 -17.700 -5.826 -3.217 1.00 11.11 N
ATOM 23 N3 G B 2 -16.831 -4.138 -4.531 1.00 10.03 N
ATOM 24 C4 G B 2 -15.708 -3.759 -5.178 1.00 10.15 C
ATOM 25 P U B 3 -14.834 1.655 -2.941 1.00 11.71 P
ATOM 26 OP1 U B 3 -15.154 2.974 -2.335 1.00 13.74 O
ATOM 27 OP2 U B 3 -13.426 1.314 -3.243 1.00 12.44 O
ATOM 28 O5' U B 3 -15.410 0.508 -2.002 1.00 9.82 O
TER

Atoms:
C4: (-12.836,-4.448,-2.023)
N3: (-13.738,-5.157,-1.254)
OP1: (-15.154,2.974,-2.335)
OP2: (-13.426,1.314,-3.243)
C2: (-14.974,-4.732,-0.834)
C1': (-16.608,-2.953,-0.742)
C3': (-16.071,-0.985,0.410)
O5': (-15.410,0.508,-2.002)
O4': (-16.998,-1.839,-1.535)
C5': (-16.746,0.568,-1.524)
P: (-14.834,1.655,-2.941)
C4': (-17.056,-0.653,-0.696)
C2': (-16.434,-2.434,0.685)
O2': (-17.646,-2.553,1.407)
N1: (-15.323,-3.465,-1.235)
O4: (-11.726,-4.933,-2.259)
O2: (-15.707,-5.422,-0.152)
C6: (-14.488,-2.714,-2.029)
C5: (-13.285,-3.149,-2.423)
O3': (-16.230,-0.158,1.552)
OP1: (-11.905,2.451,-7.478)
OP2: (-10.979,0.078,-7.181)
C3': (-15.576,0.356,-5.090)
C1': (-16.530,-1.539,-6.084)
C5': (-14.620,1.258,-7.301)
O6: (-13.377,-6.424,-4.599)
O4': (-16.068,-0.679,-7.119)
C8: (-14.251,-2.614,-6.367)
C2: (-16.684,-5.306,-3.924)
C6: (-14.363,-5.679,-4.627)
C5: (-14.504,-4.422,-5.272)
C4: (-15.708,-3.759,-5.178)
P: (-12.041,0.984,-7.679)
C4': (-15.786,0.639,-6.568)
C2': (-16.672,-0.668,-4.837)
O2': (-17.962,-0.091,-4.832)
N1: (-15.528,-6.047,-3.962)
N2: (-17.700,-5.826,-3.217)
N3: (-16.831,-4.138,-4.531)
N7: (-13.594,-3.688,-6.022)
N9: (-15.538,-2.591,-5.889)
O5': (-13.431,0.518,-7.055)
O3': (-15.705,1.523,-4.288)
Image (generated by PyMOL):
PyMOL image
show in jmol