Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:V9:V43
Extra
PDB:
ATOM 1 O3' A A 8 -76.677 122.543 105.891 1.00 42.98 O
ATOM 2 P G A 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 3 OP1 G A 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 4 OP2 G A 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 5 O5' G A 9 -76.130 120.451 107.153 1.00 40.73 O
ATOM 6 C5' G A 9 -76.244 119.054 107.391 1.00 40.73 C
ATOM 7 C4' G A 9 -75.061 118.310 106.828 1.00 40.73 C
ATOM 8 O4' G A 9 -75.136 118.305 105.379 1.00 40.73 O
ATOM 9 C3' G A 9 -73.695 118.913 107.134 1.00 40.73 C
ATOM 10 O3' G A 9 -73.198 118.534 108.410 1.00 40.73 O
ATOM 11 C2' G A 9 -72.839 118.430 105.969 1.00 40.73 C
ATOM 12 O2' G A 9 -72.387 117.102 106.183 1.00 40.73 O
ATOM 13 C1' G A 9 -73.847 118.421 104.823 1.00 40.73 C
ATOM 14 N9 G A 9 -73.798 119.655 104.024 1.00 40.23 N
ATOM 15 C8 G A 9 -74.840 120.523 103.815 1.00 40.23 C
ATOM 16 N7 G A 9 -74.526 121.533 103.052 1.00 40.23 N
ATOM 17 C5 G A 9 -73.198 121.318 102.743 1.00 40.23 C
ATOM 18 C6 G A 9 -72.324 122.096 101.945 1.00 40.23 C
ATOM 19 O6 G A 9 -72.559 123.158 101.331 1.00 40.23 O
ATOM 20 N1 G A 9 -71.060 121.509 101.894 1.00 40.23 N
ATOM 21 C2 G A 9 -70.706 120.337 102.523 1.00 40.23 C
ATOM 22 N2 G A 9 -69.441 119.947 102.337 1.00 40.23 N
ATOM 23 N3 G A 9 -71.508 119.601 103.270 1.00 40.23 N
ATOM 24 C4 G A 9 -72.731 120.156 103.330 1.00 40.23 C
ATOM 25 P C A 10 -72.457 119.610 109.349 1.00 33.35 P
ATOM 26 OP1 C A 10 -72.340 119.008 110.696 1.00 33.35 O
ATOM 27 OP2 C A 10 -73.188 120.907 109.214 1.00 33.35 O
ATOM 28 O5' C A 10 -71.017 119.715 108.683 1.00 33.35 O
TER
ATOM 1 O3' C B 42 -81.397 127.304 93.671 1.00 64.45 O
ATOM 2 P G B 43 -81.039 128.290 94.881 1.00 78.27 P
ATOM 3 OP1 G B 43 -82.246 129.113 95.137 1.00 78.27 O
ATOM 4 OP2 G B 43 -79.767 128.974 94.530 1.00 78.27 O
ATOM 5 O5' G B 43 -80.789 127.290 96.098 1.00 78.27 O
ATOM 6 C5' G B 43 -81.875 126.637 96.747 1.00 78.27 C
ATOM 7 C4' G B 43 -81.606 126.399 98.219 1.00 78.27 C
ATOM 8 O4' G B 43 -80.221 125.983 98.408 1.00 78.27 O
ATOM 9 C3' G B 43 -81.837 127.607 99.132 1.00 78.27 C
ATOM 10 O3' G B 43 -82.640 127.234 100.243 1.00 78.27 O
ATOM 11 C2' G B 43 -80.441 127.991 99.619 1.00 78.27 C
ATOM 12 O2' G B 43 -80.408 128.485 100.939 1.00 78.27 O
ATOM 13 C1' G B 43 -79.650 126.689 99.490 1.00 78.27 C
ATOM 14 N9 G B 43 -78.227 126.913 99.206 1.00 77.32 N
ATOM 15 C8 G B 43 -77.775 127.916 98.377 1.00 77.32 C
ATOM 16 N7 G B 43 -76.477 127.972 98.279 1.00 77.32 N
ATOM 17 C5 G B 43 -76.020 126.953 99.111 1.00 77.32 C
ATOM 18 C6 G B 43 -74.680 126.538 99.403 1.00 77.32 C
ATOM 19 O6 G B 43 -73.596 126.982 98.995 1.00 77.32 O
ATOM 20 N1 G B 43 -74.671 125.472 100.287 1.00 77.32 N
ATOM 21 C2 G B 43 -75.787 124.885 100.821 1.00 77.32 C
ATOM 22 N2 G B 43 -75.516 123.875 101.650 1.00 77.32 N
ATOM 23 N3 G B 43 -77.042 125.246 100.569 1.00 77.32 N
ATOM 24 C4 G B 43 -77.093 126.289 99.705 1.00 77.32 C
ATOM 25 P U B 44 -84.236 127.308 100.137 1.00106.42 P
ATOM 26 OP1 U B 44 -84.569 127.406 98.696 1.00106.42 O
ATOM 27 OP2 U B 44 -84.684 128.393 101.047 1.00106.42 O
ATOM 28 O5' U B 44 -84.681 125.881 100.710 1.00106.42 O
TER
ATOM 2 P G A 9 -77.364 121.286 106.610 1.00 40.73 P
ATOM 3 OP1 G A 9 -78.062 120.505 105.551 1.00 40.73 O
ATOM 4 OP2 G A 9 -78.151 121.826 107.749 1.00 40.73 O
ATOM 5 O5' G A 9 -76.130 120.451 107.153 1.00 40.73 O
ATOM 6 C5' G A 9 -76.244 119.054 107.391 1.00 40.73 C
ATOM 7 C4' G A 9 -75.061 118.310 106.828 1.00 40.73 C
ATOM 8 O4' G A 9 -75.136 118.305 105.379 1.00 40.73 O
ATOM 9 C3' G A 9 -73.695 118.913 107.134 1.00 40.73 C
ATOM 10 O3' G A 9 -73.198 118.534 108.410 1.00 40.73 O
ATOM 11 C2' G A 9 -72.839 118.430 105.969 1.00 40.73 C
ATOM 12 O2' G A 9 -72.387 117.102 106.183 1.00 40.73 O
ATOM 13 C1' G A 9 -73.847 118.421 104.823 1.00 40.73 C
ATOM 14 N9 G A 9 -73.798 119.655 104.024 1.00 40.23 N
ATOM 15 C8 G A 9 -74.840 120.523 103.815 1.00 40.23 C
ATOM 16 N7 G A 9 -74.526 121.533 103.052 1.00 40.23 N
ATOM 17 C5 G A 9 -73.198 121.318 102.743 1.00 40.23 C
ATOM 18 C6 G A 9 -72.324 122.096 101.945 1.00 40.23 C
ATOM 19 O6 G A 9 -72.559 123.158 101.331 1.00 40.23 O
ATOM 20 N1 G A 9 -71.060 121.509 101.894 1.00 40.23 N
ATOM 21 C2 G A 9 -70.706 120.337 102.523 1.00 40.23 C
ATOM 22 N2 G A 9 -69.441 119.947 102.337 1.00 40.23 N
ATOM 23 N3 G A 9 -71.508 119.601 103.270 1.00 40.23 N
ATOM 24 C4 G A 9 -72.731 120.156 103.330 1.00 40.23 C
ATOM 25 P C A 10 -72.457 119.610 109.349 1.00 33.35 P
ATOM 26 OP1 C A 10 -72.340 119.008 110.696 1.00 33.35 O
ATOM 27 OP2 C A 10 -73.188 120.907 109.214 1.00 33.35 O
ATOM 28 O5' C A 10 -71.017 119.715 108.683 1.00 33.35 O
TER
ATOM 1 O3' C B 42 -81.397 127.304 93.671 1.00 64.45 O
ATOM 2 P G B 43 -81.039 128.290 94.881 1.00 78.27 P
ATOM 3 OP1 G B 43 -82.246 129.113 95.137 1.00 78.27 O
ATOM 4 OP2 G B 43 -79.767 128.974 94.530 1.00 78.27 O
ATOM 5 O5' G B 43 -80.789 127.290 96.098 1.00 78.27 O
ATOM 6 C5' G B 43 -81.875 126.637 96.747 1.00 78.27 C
ATOM 7 C4' G B 43 -81.606 126.399 98.219 1.00 78.27 C
ATOM 8 O4' G B 43 -80.221 125.983 98.408 1.00 78.27 O
ATOM 9 C3' G B 43 -81.837 127.607 99.132 1.00 78.27 C
ATOM 10 O3' G B 43 -82.640 127.234 100.243 1.00 78.27 O
ATOM 11 C2' G B 43 -80.441 127.991 99.619 1.00 78.27 C
ATOM 12 O2' G B 43 -80.408 128.485 100.939 1.00 78.27 O
ATOM 13 C1' G B 43 -79.650 126.689 99.490 1.00 78.27 C
ATOM 14 N9 G B 43 -78.227 126.913 99.206 1.00 77.32 N
ATOM 15 C8 G B 43 -77.775 127.916 98.377 1.00 77.32 C
ATOM 16 N7 G B 43 -76.477 127.972 98.279 1.00 77.32 N
ATOM 17 C5 G B 43 -76.020 126.953 99.111 1.00 77.32 C
ATOM 18 C6 G B 43 -74.680 126.538 99.403 1.00 77.32 C
ATOM 19 O6 G B 43 -73.596 126.982 98.995 1.00 77.32 O
ATOM 20 N1 G B 43 -74.671 125.472 100.287 1.00 77.32 N
ATOM 21 C2 G B 43 -75.787 124.885 100.821 1.00 77.32 C
ATOM 22 N2 G B 43 -75.516 123.875 101.650 1.00 77.32 N
ATOM 23 N3 G B 43 -77.042 125.246 100.569 1.00 77.32 N
ATOM 24 C4 G B 43 -77.093 126.289 99.705 1.00 77.32 C
ATOM 25 P U B 44 -84.236 127.308 100.137 1.00106.42 P
ATOM 26 OP1 U B 44 -84.569 127.406 98.696 1.00106.42 O
ATOM 27 OP2 U B 44 -84.684 128.393 101.047 1.00106.42 O
ATOM 28 O5' U B 44 -84.681 125.881 100.710 1.00106.42 O
TER
Atoms:
OP1: (-78.062,120.505,105.551)
OP2: (-78.151,121.826,107.749)
C3': (-73.695,118.913,107.134)
C1': (-73.847,118.421,104.823)
C5': (-76.244,119.054,107.391)
O6: (-72.559,123.158,101.331)
O4': (-75.136,118.305,105.379)
C8: (-74.840,120.523,103.815)
C2: (-70.706,120.337,102.523)
C6: (-72.324,122.096,101.945)
C5: (-73.198,121.318,102.743)
C4: (-72.731,120.156,103.330)
P: (-77.364,121.286,106.610)
C4': (-75.061,118.310,106.828)
C2': (-72.839,118.430,105.969)
O2': (-72.387,117.102,106.183)
N1: (-71.060,121.509,101.894)
N2: (-69.441,119.947,102.337)
N3: (-71.508,119.601,103.270)
N7: (-74.526,121.533,103.052)
N9: (-73.798,119.655,104.024)
O5': (-76.130,120.451,107.153)
O3': (-73.198,118.534,108.410)
OP2: (-78.151,121.826,107.749)
C3': (-73.695,118.913,107.134)
C1': (-73.847,118.421,104.823)
C5': (-76.244,119.054,107.391)
O6: (-72.559,123.158,101.331)
O4': (-75.136,118.305,105.379)
C8: (-74.840,120.523,103.815)
C2: (-70.706,120.337,102.523)
C6: (-72.324,122.096,101.945)
C5: (-73.198,121.318,102.743)
C4: (-72.731,120.156,103.330)
P: (-77.364,121.286,106.610)
C4': (-75.061,118.310,106.828)
C2': (-72.839,118.430,105.969)
O2': (-72.387,117.102,106.183)
N1: (-71.060,121.509,101.894)
N2: (-69.441,119.947,102.337)
N3: (-71.508,119.601,103.270)
N7: (-74.526,121.533,103.052)
N9: (-73.798,119.655,104.024)
O5': (-76.130,120.451,107.153)
O3': (-73.198,118.534,108.410)
OP1: (-82.246,129.113,95.137)
OP2: (-79.767,128.974,94.530)
C3': (-81.837,127.607,99.132)
C1': (-79.650,126.689,99.490)
C5': (-81.875,126.637,96.747)
O6: (-73.596,126.982,98.995)
O4': (-80.221,125.983,98.408)
C8: (-77.775,127.916,98.377)
C2: (-75.787,124.885,100.821)
C6: (-74.680,126.538,99.403)
C5: (-76.020,126.953,99.111)
C4: (-77.093,126.289,99.705)
P: (-81.039,128.290,94.881)
C4': (-81.606,126.399,98.219)
C2': (-80.441,127.991,99.619)
O2': (-80.408,128.485,100.939)
N1: (-74.671,125.472,100.287)
N2: (-75.516,123.875,101.650)
N3: (-77.042,125.246,100.569)
N7: (-76.477,127.972,98.279)
N9: (-78.227,126.913,99.206)
O5': (-80.789,127.290,96.098)
O3': (-82.640,127.234,100.243)
OP2: (-79.767,128.974,94.530)
C3': (-81.837,127.607,99.132)
C1': (-79.650,126.689,99.490)
C5': (-81.875,126.637,96.747)
O6: (-73.596,126.982,98.995)
O4': (-80.221,125.983,98.408)
C8: (-77.775,127.916,98.377)
C2: (-75.787,124.885,100.821)
C6: (-74.680,126.538,99.403)
C5: (-76.020,126.953,99.111)
C4: (-77.093,126.289,99.705)
P: (-81.039,128.290,94.881)
C4': (-81.606,126.399,98.219)
C2': (-80.441,127.991,99.619)
O2': (-80.408,128.485,100.939)
N1: (-74.671,125.472,100.287)
N2: (-75.516,123.875,101.650)
N3: (-77.042,125.246,100.569)
N7: (-76.477,127.972,98.279)
N9: (-78.227,126.913,99.206)
O5': (-80.789,127.290,96.098)
O3': (-82.640,127.234,100.243)
Image (generated by PyMOL):