ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SJ2:A7:B11

Extra

PDB:
ATOM 1 O3' C A 6 9.939 5.427 6.544 1.00 18.05 O
ATOM 2 P G A 7 9.025 5.605 7.850 1.00 18.70 P
ATOM 3 OP1 G A 7 7.745 4.894 7.578 1.00 20.80 O
ATOM 4 OP2 G A 7 8.976 7.054 8.175 1.00 20.08 O
ATOM 5 O5' G A 7 9.859 4.814 8.945 1.00 18.01 O
ATOM 6 C5' G A 7 9.865 5.199 10.306 1.00 20.05 C
ATOM 7 C4' G A 7 10.921 4.436 11.062 1.00 17.35 C
ATOM 8 O4' G A 7 12.236 4.781 10.548 1.00 17.52 O
ATOM 9 C3' G A 7 11.024 4.722 12.549 1.00 17.39 C
ATOM 10 O3' G A 7 10.064 4.032 13.310 1.00 17.44 O
ATOM 11 C2' G A 7 12.452 4.309 12.849 1.00 19.80 C
ATOM 12 O2' G A 7 12.579 2.891 12.853 1.00 20.97 O
ATOM 13 C1' G A 7 13.156 4.860 11.617 1.00 17.54 C
ATOM 14 N9 G A 7 13.528 6.270 11.816 1.00 15.19 N
ATOM 15 C8 G A 7 14.481 6.650 12.725 1.00 15.80 C
ATOM 16 N7 G A 7 14.634 7.930 12.786 1.00 13.57 N
ATOM 17 C5 G A 7 13.725 8.454 11.882 1.00 13.52 C
ATOM 18 C6 G A 7 13.450 9.808 11.535 1.00 13.17 C
ATOM 19 O6 G A 7 13.956 10.867 11.945 1.00 15.39 O
ATOM 20 N1 G A 7 12.451 9.892 10.581 1.00 15.57 N
ATOM 21 C2 G A 7 11.787 8.826 10.035 1.00 17.40 C
ATOM 22 N2 G A 7 10.846 9.143 9.126 1.00 18.10 N
ATOM 23 N3 G A 7 12.037 7.562 10.349 1.00 15.37 N
ATOM 24 C4 G A 7 13.007 7.436 11.280 1.00 16.83 C
ATOM 25 P G A 8 9.367 4.754 14.554 1.00 17.02 P
ATOM 26 OP1 G A 8 8.445 3.756 15.167 1.00 21.42 O
ATOM 27 OP2 G A 8 8.815 6.032 14.079 1.00 18.75 O
ATOM 28 O5' G A 8 10.588 5.049 15.523 1.00 13.26 O
TER

ATOM 1 O3' C B 10 20.153 17.457 19.211 1.00 12.50 O
ATOM 2 P G B 11 21.092 16.854 18.053 1.00 12.19 P
ATOM 3 OP1 G B 11 22.488 17.158 18.435 1.00 13.72 O
ATOM 4 OP2 G B 11 20.579 17.342 16.758 1.00 13.25 O
ATOM 5 O5' G B 11 20.811 15.293 18.136 1.00 12.49 O
ATOM 6 C5' G B 11 21.272 14.500 19.211 1.00 12.34 C
ATOM 7 C4' G B 11 20.793 13.076 19.065 1.00 12.10 C
ATOM 8 O4' G B 11 19.336 13.043 19.056 1.00 13.14 O
ATOM 9 C3' G B 11 21.178 12.363 17.772 1.00 11.26 C
ATOM 10 O3' G B 11 22.507 11.884 17.780 1.00 12.14 O
ATOM 11 C2' G B 11 20.125 11.266 17.700 1.00 12.92 C
ATOM 12 O2' G B 11 20.407 10.228 18.632 1.00 13.42 O
ATOM 13 C1' G B 11 18.889 12.027 18.174 1.00 12.85 C
ATOM 14 N9 G B 11 18.179 12.659 17.042 1.00 11.07 N
ATOM 15 C8 G B 11 18.185 13.979 16.642 1.00 12.05 C
ATOM 16 N7 G B 11 17.439 14.200 15.574 1.00 12.76 N
ATOM 17 C5 G B 11 16.948 12.932 15.247 1.00 12.67 C
ATOM 18 C6 G B 11 16.089 12.518 14.193 1.00 9.79 C
ATOM 19 O6 G B 11 15.603 13.201 13.286 1.00 12.68 O
ATOM 20 N1 G B 11 15.849 11.140 14.238 1.00 11.15 N
ATOM 21 C2 G B 11 16.361 10.281 15.182 1.00 10.80 C
ATOM 22 N2 G B 11 16.012 8.992 15.043 1.00 10.73 N
ATOM 23 N3 G B 11 17.142 10.662 16.180 1.00 10.68 N
ATOM 24 C4 G B 11 17.393 11.986 16.146 1.00 12.53 C
ATOM 25 P G B 12 23.312 11.639 16.407 1.00 13.30 P
ATOM 26 OP1 G B 12 24.731 11.388 16.785 1.00 14.36 O
ATOM 27 OP2 G B 12 22.998 12.763 15.491 1.00 15.45 O
ATOM 28 O5' G B 12 22.663 10.306 15.839 1.00 11.75 O
TER

Atoms:
OP1: (7.745,4.894,7.578)
OP2: (8.976,7.054,8.175)
C3': (11.024,4.722,12.549)
C1': (13.156,4.860,11.617)
C5': (9.865,5.199,10.306)
O6: (13.956,10.867,11.945)
O4': (12.236,4.781,10.548)
C8: (14.481,6.650,12.725)
C2: (11.787,8.826,10.035)
C6: (13.450,9.808,11.535)
C5: (13.725,8.454,11.882)
C4: (13.007,7.436,11.280)
P: (9.025,5.605,7.850)
C4': (10.921,4.436,11.062)
C2': (12.452,4.309,12.849)
O2': (12.579,2.891,12.853)
N1: (12.451,9.892,10.581)
N2: (10.846,9.143,9.126)
N3: (12.037,7.562,10.349)
N7: (14.634,7.930,12.786)
N9: (13.528,6.270,11.816)
O5': (9.859,4.814,8.945)
O3': (10.064,4.032,13.310)
OP1: (22.488,17.158,18.435)
OP2: (20.579,17.342,16.758)
C3': (21.178,12.363,17.772)
C1': (18.889,12.027,18.174)
C5': (21.272,14.500,19.211)
O6: (15.603,13.201,13.286)
O4': (19.336,13.043,19.056)
C8: (18.185,13.979,16.642)
C2: (16.361,10.281,15.182)
C6: (16.089,12.518,14.193)
C5: (16.948,12.932,15.247)
C4: (17.393,11.986,16.146)
P: (21.092,16.854,18.053)
C4': (20.793,13.076,19.065)
C2': (20.125,11.266,17.700)
O2': (20.407,10.228,18.632)
N1: (15.849,11.140,14.238)
N2: (16.012,8.992,15.043)
N3: (17.142,10.662,16.180)
N7: (17.439,14.200,15.574)
N9: (18.179,12.659,17.042)
O5': (20.811,15.293,18.136)
O3': (22.507,11.884,17.780)
Image (generated by PyMOL):
PyMOL image
show in jmol