Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21259:21255
Extra
PDB:
ATOM 1 O3' U A1258 -75.016 -23.452 49.556 1.00 72.44 O
ATOM 2 P G A1259 -75.708 -24.659 50.347 1.00 77.73 P
ATOM 3 OP1 G A1259 -76.488 -24.084 51.463 1.00 77.92 O
ATOM 4 OP2 G A1259 -74.634 -25.646 50.647 1.00 77.30 O
ATOM 5 O5' G A1259 -76.702 -25.242 49.270 1.00 78.27 O
ATOM 6 C5' G A1259 -77.646 -24.400 48.627 1.00 78.73 C
ATOM 7 C4' G A1259 -78.448 -25.157 47.605 1.00 79.22 C
ATOM 8 O4' G A1259 -77.579 -25.623 46.547 1.00 78.99 O
ATOM 9 C3' G A1259 -79.118 -26.410 48.111 1.00 79.47 C
ATOM 10 O3' G A1259 -80.334 -26.134 48.765 1.00 79.93 O
ATOM 11 C2' G A1259 -79.276 -27.227 46.846 1.00 79.71 C
ATOM 12 O2' G A1259 -80.357 -26.735 46.070 1.00 80.29 O
ATOM 13 C1' G A1259 -77.982 -26.897 46.121 1.00 79.24 C
ATOM 14 N9 G A1259 -76.912 -27.867 46.435 1.00 78.77 N
ATOM 15 C8 G A1259 -75.847 -27.808 47.296 1.00 78.22 C
ATOM 16 N7 G A1259 -75.128 -28.900 47.316 1.00 77.98 N
ATOM 17 C5 G A1259 -75.750 -29.739 46.407 1.00 78.37 C
ATOM 18 C6 G A1259 -75.445 -31.061 45.969 1.00 78.36 C
ATOM 19 O6 G A1259 -74.514 -31.820 46.292 1.00 78.00 O
ATOM 20 N1 G A1259 -76.383 -31.476 45.026 1.00 78.87 N
ATOM 21 C2 G A1259 -77.445 -30.734 44.570 1.00 79.33 C
ATOM 22 N2 G A1259 -78.236 -31.277 43.654 1.00 79.81 N
ATOM 23 N3 G A1259 -77.739 -29.528 44.962 1.00 79.36 N
ATOM 24 C4 G A1259 -76.848 -29.101 45.868 1.00 78.85 C
ATOM 25 P G A1260 -80.677 -26.850 50.143 1.00 68.96 P
ATOM 26 OP1 G A1260 -81.987 -26.319 50.594 1.00 69.51 O
ATOM 27 OP2 G A1260 -79.512 -26.699 51.026 1.00 68.35 O
ATOM 28 O5' G A1260 -80.823 -28.353 49.705 1.00 69.12 O
TER
ATOM 1 O3' U B1254 -61.937 -26.715 47.764 1.00 74.70 O
ATOM 2 P G B1255 -61.792 -27.917 48.809 1.00 76.91 P
ATOM 3 OP1 G B1255 -60.763 -27.518 49.773 1.00 76.53 O
ATOM 4 OP2 G B1255 -61.587 -29.166 48.034 1.00 77.03 O
ATOM 5 O5' G B1255 -63.217 -27.937 49.514 1.00 77.22 O
ATOM 6 C5' G B1255 -64.360 -28.486 48.858 1.00 77.64 C
ATOM 7 C4' G B1255 -65.605 -28.367 49.706 1.00 77.91 C
ATOM 8 O4' G B1255 -66.744 -28.844 48.949 1.00 78.36 O
ATOM 9 C3' G B1255 -65.600 -29.185 51.006 1.00 77.86 C
ATOM 10 O3' G B1255 -66.384 -28.517 51.996 1.00 77.97 O
ATOM 11 C2' G B1255 -66.347 -30.429 50.594 1.00 78.22 C
ATOM 12 O2' G B1255 -66.887 -31.148 51.678 1.00 78.36 O
ATOM 13 C1' G B1255 -67.430 -29.792 49.739 1.00 78.57 C
ATOM 14 N9 G B1255 -68.190 -30.722 48.878 1.00 78.96 N
ATOM 15 C8 G B1255 -67.798 -31.918 48.326 1.00 78.98 C
ATOM 16 N7 G B1255 -68.735 -32.512 47.640 1.00 79.39 N
ATOM 17 C5 G B1255 -69.812 -31.672 47.779 1.00 79.66 C
ATOM 18 C6 G B1255 -71.112 -31.810 47.267 1.00 80.17 C
ATOM 19 O6 G B1255 -71.546 -32.721 46.575 1.00 80.45 O
ATOM 20 N1 G B1255 -71.946 -30.762 47.622 1.00 80.36 N
ATOM 21 C2 G B1255 -71.562 -29.707 48.387 1.00 80.08 C
ATOM 22 N2 G B1255 -72.542 -28.826 48.597 1.00 80.36 N
ATOM 23 N3 G B1255 -70.337 -29.556 48.885 1.00 79.59 N
ATOM 24 C4 G B1255 -69.519 -30.577 48.546 1.00 79.41 C
ATOM 25 P C B1256 -65.687 -27.734 53.202 1.00 77.55 P
ATOM 26 OP1 C B1256 -64.609 -28.622 53.782 1.00 77.28 O
ATOM 27 OP2 C B1256 -66.752 -27.260 54.074 1.00 77.79 O
ATOM 28 O5' C B1256 -65.049 -26.492 52.473 1.00 77.32 O
TER
ATOM 2 P G A1259 -75.708 -24.659 50.347 1.00 77.73 P
ATOM 3 OP1 G A1259 -76.488 -24.084 51.463 1.00 77.92 O
ATOM 4 OP2 G A1259 -74.634 -25.646 50.647 1.00 77.30 O
ATOM 5 O5' G A1259 -76.702 -25.242 49.270 1.00 78.27 O
ATOM 6 C5' G A1259 -77.646 -24.400 48.627 1.00 78.73 C
ATOM 7 C4' G A1259 -78.448 -25.157 47.605 1.00 79.22 C
ATOM 8 O4' G A1259 -77.579 -25.623 46.547 1.00 78.99 O
ATOM 9 C3' G A1259 -79.118 -26.410 48.111 1.00 79.47 C
ATOM 10 O3' G A1259 -80.334 -26.134 48.765 1.00 79.93 O
ATOM 11 C2' G A1259 -79.276 -27.227 46.846 1.00 79.71 C
ATOM 12 O2' G A1259 -80.357 -26.735 46.070 1.00 80.29 O
ATOM 13 C1' G A1259 -77.982 -26.897 46.121 1.00 79.24 C
ATOM 14 N9 G A1259 -76.912 -27.867 46.435 1.00 78.77 N
ATOM 15 C8 G A1259 -75.847 -27.808 47.296 1.00 78.22 C
ATOM 16 N7 G A1259 -75.128 -28.900 47.316 1.00 77.98 N
ATOM 17 C5 G A1259 -75.750 -29.739 46.407 1.00 78.37 C
ATOM 18 C6 G A1259 -75.445 -31.061 45.969 1.00 78.36 C
ATOM 19 O6 G A1259 -74.514 -31.820 46.292 1.00 78.00 O
ATOM 20 N1 G A1259 -76.383 -31.476 45.026 1.00 78.87 N
ATOM 21 C2 G A1259 -77.445 -30.734 44.570 1.00 79.33 C
ATOM 22 N2 G A1259 -78.236 -31.277 43.654 1.00 79.81 N
ATOM 23 N3 G A1259 -77.739 -29.528 44.962 1.00 79.36 N
ATOM 24 C4 G A1259 -76.848 -29.101 45.868 1.00 78.85 C
ATOM 25 P G A1260 -80.677 -26.850 50.143 1.00 68.96 P
ATOM 26 OP1 G A1260 -81.987 -26.319 50.594 1.00 69.51 O
ATOM 27 OP2 G A1260 -79.512 -26.699 51.026 1.00 68.35 O
ATOM 28 O5' G A1260 -80.823 -28.353 49.705 1.00 69.12 O
TER
ATOM 1 O3' U B1254 -61.937 -26.715 47.764 1.00 74.70 O
ATOM 2 P G B1255 -61.792 -27.917 48.809 1.00 76.91 P
ATOM 3 OP1 G B1255 -60.763 -27.518 49.773 1.00 76.53 O
ATOM 4 OP2 G B1255 -61.587 -29.166 48.034 1.00 77.03 O
ATOM 5 O5' G B1255 -63.217 -27.937 49.514 1.00 77.22 O
ATOM 6 C5' G B1255 -64.360 -28.486 48.858 1.00 77.64 C
ATOM 7 C4' G B1255 -65.605 -28.367 49.706 1.00 77.91 C
ATOM 8 O4' G B1255 -66.744 -28.844 48.949 1.00 78.36 O
ATOM 9 C3' G B1255 -65.600 -29.185 51.006 1.00 77.86 C
ATOM 10 O3' G B1255 -66.384 -28.517 51.996 1.00 77.97 O
ATOM 11 C2' G B1255 -66.347 -30.429 50.594 1.00 78.22 C
ATOM 12 O2' G B1255 -66.887 -31.148 51.678 1.00 78.36 O
ATOM 13 C1' G B1255 -67.430 -29.792 49.739 1.00 78.57 C
ATOM 14 N9 G B1255 -68.190 -30.722 48.878 1.00 78.96 N
ATOM 15 C8 G B1255 -67.798 -31.918 48.326 1.00 78.98 C
ATOM 16 N7 G B1255 -68.735 -32.512 47.640 1.00 79.39 N
ATOM 17 C5 G B1255 -69.812 -31.672 47.779 1.00 79.66 C
ATOM 18 C6 G B1255 -71.112 -31.810 47.267 1.00 80.17 C
ATOM 19 O6 G B1255 -71.546 -32.721 46.575 1.00 80.45 O
ATOM 20 N1 G B1255 -71.946 -30.762 47.622 1.00 80.36 N
ATOM 21 C2 G B1255 -71.562 -29.707 48.387 1.00 80.08 C
ATOM 22 N2 G B1255 -72.542 -28.826 48.597 1.00 80.36 N
ATOM 23 N3 G B1255 -70.337 -29.556 48.885 1.00 79.59 N
ATOM 24 C4 G B1255 -69.519 -30.577 48.546 1.00 79.41 C
ATOM 25 P C B1256 -65.687 -27.734 53.202 1.00 77.55 P
ATOM 26 OP1 C B1256 -64.609 -28.622 53.782 1.00 77.28 O
ATOM 27 OP2 C B1256 -66.752 -27.260 54.074 1.00 77.79 O
ATOM 28 O5' C B1256 -65.049 -26.492 52.473 1.00 77.32 O
TER
Atoms:
OP1: (-76.488,-24.084,51.463)
OP2: (-74.634,-25.646,50.647)
C3': (-79.118,-26.410,48.111)
C1': (-77.982,-26.897,46.121)
C5': (-77.646,-24.400,48.627)
O6: (-74.514,-31.820,46.292)
O4': (-77.579,-25.623,46.547)
C8: (-75.847,-27.808,47.296)
C2: (-77.445,-30.734,44.570)
C6: (-75.445,-31.061,45.969)
C5: (-75.750,-29.739,46.407)
C4: (-76.848,-29.101,45.868)
P: (-75.708,-24.659,50.347)
C4': (-78.448,-25.157,47.605)
C2': (-79.276,-27.227,46.846)
O2': (-80.357,-26.735,46.070)
N1: (-76.383,-31.476,45.026)
N2: (-78.236,-31.277,43.654)
N3: (-77.739,-29.528,44.962)
N7: (-75.128,-28.900,47.316)
N9: (-76.912,-27.867,46.435)
O5': (-76.702,-25.242,49.270)
O3': (-80.334,-26.134,48.765)
OP2: (-74.634,-25.646,50.647)
C3': (-79.118,-26.410,48.111)
C1': (-77.982,-26.897,46.121)
C5': (-77.646,-24.400,48.627)
O6: (-74.514,-31.820,46.292)
O4': (-77.579,-25.623,46.547)
C8: (-75.847,-27.808,47.296)
C2: (-77.445,-30.734,44.570)
C6: (-75.445,-31.061,45.969)
C5: (-75.750,-29.739,46.407)
C4: (-76.848,-29.101,45.868)
P: (-75.708,-24.659,50.347)
C4': (-78.448,-25.157,47.605)
C2': (-79.276,-27.227,46.846)
O2': (-80.357,-26.735,46.070)
N1: (-76.383,-31.476,45.026)
N2: (-78.236,-31.277,43.654)
N3: (-77.739,-29.528,44.962)
N7: (-75.128,-28.900,47.316)
N9: (-76.912,-27.867,46.435)
O5': (-76.702,-25.242,49.270)
O3': (-80.334,-26.134,48.765)
OP1: (-60.763,-27.518,49.773)
OP2: (-61.587,-29.166,48.034)
C3': (-65.600,-29.185,51.006)
C1': (-67.430,-29.792,49.739)
C5': (-64.360,-28.486,48.858)
O6: (-71.546,-32.721,46.575)
O4': (-66.744,-28.844,48.949)
C8: (-67.798,-31.918,48.326)
C2: (-71.562,-29.707,48.387)
C6: (-71.112,-31.810,47.267)
C5: (-69.812,-31.672,47.779)
C4: (-69.519,-30.577,48.546)
P: (-61.792,-27.917,48.809)
C4': (-65.605,-28.367,49.706)
C2': (-66.347,-30.429,50.594)
O2': (-66.887,-31.148,51.678)
N1: (-71.946,-30.762,47.622)
N2: (-72.542,-28.826,48.597)
N3: (-70.337,-29.556,48.885)
N7: (-68.735,-32.512,47.640)
N9: (-68.190,-30.722,48.878)
O5': (-63.217,-27.937,49.514)
O3': (-66.384,-28.517,51.996)
OP2: (-61.587,-29.166,48.034)
C3': (-65.600,-29.185,51.006)
C1': (-67.430,-29.792,49.739)
C5': (-64.360,-28.486,48.858)
O6: (-71.546,-32.721,46.575)
O4': (-66.744,-28.844,48.949)
C8: (-67.798,-31.918,48.326)
C2: (-71.562,-29.707,48.387)
C6: (-71.112,-31.810,47.267)
C5: (-69.812,-31.672,47.779)
C4: (-69.519,-30.577,48.546)
P: (-61.792,-27.917,48.809)
C4': (-65.605,-28.367,49.706)
C2': (-66.347,-30.429,50.594)
O2': (-66.887,-31.148,51.678)
N1: (-71.946,-30.762,47.622)
N2: (-72.542,-28.826,48.597)
N3: (-70.337,-29.556,48.885)
N7: (-68.735,-32.512,47.640)
N9: (-68.190,-30.722,48.878)
O5': (-63.217,-27.937,49.514)
O3': (-66.384,-28.517,51.996)
Image (generated by PyMOL):