Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11210:11190
Extra
PDB:
ATOM 1 O3' U A1209 -4.105 -0.497 -13.427 1.00226.15 O
ATOM 2 P G A1210 -5.593 -0.887 -12.967 1.00227.81 P
ATOM 3 OP1 G A1210 -5.502 -2.205 -12.288 1.00227.87 O
ATOM 4 OP2 G A1210 -6.470 -0.755 -14.160 1.00228.48 O
ATOM 5 O5' G A1210 -5.947 0.248 -11.906 1.00228.00 O
ATOM 6 C5' G A1210 -6.606 1.442 -12.306 1.00228.41 C
ATOM 7 C4' G A1210 -5.622 2.552 -12.578 1.00227.54 C
ATOM 8 O4' G A1210 -4.857 2.246 -13.779 1.00226.95 O
ATOM 9 C3' G A1210 -6.226 3.917 -12.869 1.00227.89 C
ATOM 10 O3' G A1210 -6.596 4.628 -11.702 1.00228.13 O
ATOM 11 C2' G A1210 -5.130 4.594 -13.677 1.00226.96 C
ATOM 12 O2' G A1210 -4.068 5.009 -12.829 1.00226.10 O
ATOM 13 C1' G A1210 -4.638 3.424 -14.527 1.00226.66 C
ATOM 14 N9 G A1210 -5.381 3.309 -15.801 1.00227.24 N
ATOM 15 C8 G A1210 -5.928 2.147 -16.295 1.00227.77 C
ATOM 16 N7 G A1210 -6.536 2.300 -17.442 1.00228.22 N
ATOM 17 C5 G A1210 -6.386 3.650 -17.738 1.00227.98 C
ATOM 18 C6 G A1210 -6.841 4.401 -18.862 1.00228.26 C
ATOM 19 O6 G A1210 -7.487 4.012 -19.848 1.00228.79 O
ATOM 20 N1 G A1210 -6.471 5.742 -18.760 1.00227.86 N
ATOM 21 C2 G A1210 -5.755 6.285 -17.718 1.00227.26 C
ATOM 22 N2 G A1210 -5.493 7.595 -17.791 1.00226.94 N
ATOM 23 N3 G A1210 -5.328 5.596 -16.673 1.00226.99 N
ATOM 24 C4 G A1210 -5.670 4.289 -16.737 1.00227.37 C
ATOM 25 P U A1211 -7.863 5.619 -11.737 1.00239.83 P
ATOM 26 OP1 U A1211 -8.194 5.958 -10.331 1.00240.08 O
ATOM 27 OP2 U A1211 -8.901 4.968 -12.577 1.00240.69 O
ATOM 28 O5' U A1211 -7.290 6.906 -12.485 1.00239.26 O
TER
ATOM 1 O3' A B1189 -14.266 -3.455 -25.847 1.00242.94 O
ATOM 2 P G B1190 -12.675 -3.190 -25.830 1.00276.13 P
ATOM 3 OP1 G B1190 -12.450 -1.922 -25.106 1.00275.84 O
ATOM 4 OP2 G B1190 -12.203 -3.297 -27.235 1.00275.75 O
ATOM 5 O5' G B1190 -12.103 -4.414 -24.980 1.00275.80 O
ATOM 6 C5' G B1190 -12.811 -4.962 -23.887 1.00276.42 C
ATOM 7 C4' G B1190 -12.047 -4.798 -22.603 1.00275.81 C
ATOM 8 O4' G B1190 -10.843 -4.026 -22.833 1.00274.79 O
ATOM 9 C3' G B1190 -12.759 -4.033 -21.506 1.00276.31 C
ATOM 10 O3' G B1190 -13.725 -4.820 -20.832 1.00277.16 O
ATOM 11 C2' G B1190 -11.603 -3.570 -20.620 1.00275.37 C
ATOM 12 O2' G B1190 -11.187 -4.612 -19.751 1.00275.15 O
ATOM 13 C1' G B1190 -10.494 -3.328 -21.653 1.00274.46 C
ATOM 14 N9 G B1190 -10.316 -1.893 -21.972 1.00274.18 N
ATOM 15 C8 G B1190 -10.874 -1.181 -23.003 1.00274.55 C
ATOM 16 N7 G B1190 -10.532 0.077 -23.042 1.00274.16 N
ATOM 17 C5 G B1190 -9.679 0.217 -21.958 1.00273.49 C
ATOM 18 C6 G B1190 -8.986 1.364 -21.485 1.00272.85 C
ATOM 19 O6 G B1190 -8.995 2.515 -21.944 1.00272.75 O
ATOM 20 N1 G B1190 -8.230 1.069 -20.353 1.00272.29 N
ATOM 21 C2 G B1190 -8.146 -0.169 -19.758 1.00272.34 C
ATOM 22 N2 G B1190 -7.359 -0.252 -18.676 1.00271.74 N
ATOM 23 N3 G B1190 -8.786 -1.245 -20.191 1.00272.94 N
ATOM 24 C4 G B1190 -9.532 -0.986 -21.288 1.00273.49 C
ATOM 25 P U B1191 -14.819 -4.128 -19.882 1.00247.92 P
ATOM 26 OP1 U B1191 -15.979 -5.053 -19.798 1.00248.92 O
ATOM 27 OP2 U B1191 -15.041 -2.753 -20.394 1.00247.96 O
ATOM 28 O5' U B1191 -14.068 -4.074 -18.480 1.00247.33 O
TER
ATOM 2 P G A1210 -5.593 -0.887 -12.967 1.00227.81 P
ATOM 3 OP1 G A1210 -5.502 -2.205 -12.288 1.00227.87 O
ATOM 4 OP2 G A1210 -6.470 -0.755 -14.160 1.00228.48 O
ATOM 5 O5' G A1210 -5.947 0.248 -11.906 1.00228.00 O
ATOM 6 C5' G A1210 -6.606 1.442 -12.306 1.00228.41 C
ATOM 7 C4' G A1210 -5.622 2.552 -12.578 1.00227.54 C
ATOM 8 O4' G A1210 -4.857 2.246 -13.779 1.00226.95 O
ATOM 9 C3' G A1210 -6.226 3.917 -12.869 1.00227.89 C
ATOM 10 O3' G A1210 -6.596 4.628 -11.702 1.00228.13 O
ATOM 11 C2' G A1210 -5.130 4.594 -13.677 1.00226.96 C
ATOM 12 O2' G A1210 -4.068 5.009 -12.829 1.00226.10 O
ATOM 13 C1' G A1210 -4.638 3.424 -14.527 1.00226.66 C
ATOM 14 N9 G A1210 -5.381 3.309 -15.801 1.00227.24 N
ATOM 15 C8 G A1210 -5.928 2.147 -16.295 1.00227.77 C
ATOM 16 N7 G A1210 -6.536 2.300 -17.442 1.00228.22 N
ATOM 17 C5 G A1210 -6.386 3.650 -17.738 1.00227.98 C
ATOM 18 C6 G A1210 -6.841 4.401 -18.862 1.00228.26 C
ATOM 19 O6 G A1210 -7.487 4.012 -19.848 1.00228.79 O
ATOM 20 N1 G A1210 -6.471 5.742 -18.760 1.00227.86 N
ATOM 21 C2 G A1210 -5.755 6.285 -17.718 1.00227.26 C
ATOM 22 N2 G A1210 -5.493 7.595 -17.791 1.00226.94 N
ATOM 23 N3 G A1210 -5.328 5.596 -16.673 1.00226.99 N
ATOM 24 C4 G A1210 -5.670 4.289 -16.737 1.00227.37 C
ATOM 25 P U A1211 -7.863 5.619 -11.737 1.00239.83 P
ATOM 26 OP1 U A1211 -8.194 5.958 -10.331 1.00240.08 O
ATOM 27 OP2 U A1211 -8.901 4.968 -12.577 1.00240.69 O
ATOM 28 O5' U A1211 -7.290 6.906 -12.485 1.00239.26 O
TER
ATOM 1 O3' A B1189 -14.266 -3.455 -25.847 1.00242.94 O
ATOM 2 P G B1190 -12.675 -3.190 -25.830 1.00276.13 P
ATOM 3 OP1 G B1190 -12.450 -1.922 -25.106 1.00275.84 O
ATOM 4 OP2 G B1190 -12.203 -3.297 -27.235 1.00275.75 O
ATOM 5 O5' G B1190 -12.103 -4.414 -24.980 1.00275.80 O
ATOM 6 C5' G B1190 -12.811 -4.962 -23.887 1.00276.42 C
ATOM 7 C4' G B1190 -12.047 -4.798 -22.603 1.00275.81 C
ATOM 8 O4' G B1190 -10.843 -4.026 -22.833 1.00274.79 O
ATOM 9 C3' G B1190 -12.759 -4.033 -21.506 1.00276.31 C
ATOM 10 O3' G B1190 -13.725 -4.820 -20.832 1.00277.16 O
ATOM 11 C2' G B1190 -11.603 -3.570 -20.620 1.00275.37 C
ATOM 12 O2' G B1190 -11.187 -4.612 -19.751 1.00275.15 O
ATOM 13 C1' G B1190 -10.494 -3.328 -21.653 1.00274.46 C
ATOM 14 N9 G B1190 -10.316 -1.893 -21.972 1.00274.18 N
ATOM 15 C8 G B1190 -10.874 -1.181 -23.003 1.00274.55 C
ATOM 16 N7 G B1190 -10.532 0.077 -23.042 1.00274.16 N
ATOM 17 C5 G B1190 -9.679 0.217 -21.958 1.00273.49 C
ATOM 18 C6 G B1190 -8.986 1.364 -21.485 1.00272.85 C
ATOM 19 O6 G B1190 -8.995 2.515 -21.944 1.00272.75 O
ATOM 20 N1 G B1190 -8.230 1.069 -20.353 1.00272.29 N
ATOM 21 C2 G B1190 -8.146 -0.169 -19.758 1.00272.34 C
ATOM 22 N2 G B1190 -7.359 -0.252 -18.676 1.00271.74 N
ATOM 23 N3 G B1190 -8.786 -1.245 -20.191 1.00272.94 N
ATOM 24 C4 G B1190 -9.532 -0.986 -21.288 1.00273.49 C
ATOM 25 P U B1191 -14.819 -4.128 -19.882 1.00247.92 P
ATOM 26 OP1 U B1191 -15.979 -5.053 -19.798 1.00248.92 O
ATOM 27 OP2 U B1191 -15.041 -2.753 -20.394 1.00247.96 O
ATOM 28 O5' U B1191 -14.068 -4.074 -18.480 1.00247.33 O
TER
Atoms:
OP1: (-5.502,-2.205,-12.288)
OP2: (-6.470,-0.755,-14.160)
C3': (-6.226,3.917,-12.869)
C1': (-4.638,3.424,-14.527)
C5': (-6.606,1.442,-12.306)
O6: (-7.487,4.012,-19.848)
O4': (-4.857,2.246,-13.779)
C8: (-5.928,2.147,-16.295)
C2: (-5.755,6.285,-17.718)
C6: (-6.841,4.401,-18.862)
C5: (-6.386,3.650,-17.738)
C4: (-5.670,4.289,-16.737)
P: (-5.593,-0.887,-12.967)
C4': (-5.622,2.552,-12.578)
C2': (-5.130,4.594,-13.677)
O2': (-4.068,5.009,-12.829)
N1: (-6.471,5.742,-18.760)
N2: (-5.493,7.595,-17.791)
N3: (-5.328,5.596,-16.673)
N7: (-6.536,2.300,-17.442)
N9: (-5.381,3.309,-15.801)
O5': (-5.947,0.248,-11.906)
O3': (-6.596,4.628,-11.702)
OP2: (-6.470,-0.755,-14.160)
C3': (-6.226,3.917,-12.869)
C1': (-4.638,3.424,-14.527)
C5': (-6.606,1.442,-12.306)
O6: (-7.487,4.012,-19.848)
O4': (-4.857,2.246,-13.779)
C8: (-5.928,2.147,-16.295)
C2: (-5.755,6.285,-17.718)
C6: (-6.841,4.401,-18.862)
C5: (-6.386,3.650,-17.738)
C4: (-5.670,4.289,-16.737)
P: (-5.593,-0.887,-12.967)
C4': (-5.622,2.552,-12.578)
C2': (-5.130,4.594,-13.677)
O2': (-4.068,5.009,-12.829)
N1: (-6.471,5.742,-18.760)
N2: (-5.493,7.595,-17.791)
N3: (-5.328,5.596,-16.673)
N7: (-6.536,2.300,-17.442)
N9: (-5.381,3.309,-15.801)
O5': (-5.947,0.248,-11.906)
O3': (-6.596,4.628,-11.702)
OP1: (-12.450,-1.922,-25.106)
OP2: (-12.203,-3.297,-27.235)
C3': (-12.759,-4.033,-21.506)
C1': (-10.494,-3.328,-21.653)
C5': (-12.811,-4.962,-23.887)
O6: (-8.995,2.515,-21.944)
O4': (-10.843,-4.026,-22.833)
C8: (-10.874,-1.181,-23.003)
C2: (-8.146,-0.169,-19.758)
C6: (-8.986,1.364,-21.485)
C5: (-9.679,0.217,-21.958)
C4: (-9.532,-0.986,-21.288)
P: (-12.675,-3.190,-25.830)
C4': (-12.047,-4.798,-22.603)
C2': (-11.603,-3.570,-20.620)
O2': (-11.187,-4.612,-19.751)
N1: (-8.230,1.069,-20.353)
N2: (-7.359,-0.252,-18.676)
N3: (-8.786,-1.245,-20.191)
N7: (-10.532,0.077,-23.042)
N9: (-10.316,-1.893,-21.972)
O5': (-12.103,-4.414,-24.980)
O3': (-13.725,-4.820,-20.832)
OP2: (-12.203,-3.297,-27.235)
C3': (-12.759,-4.033,-21.506)
C1': (-10.494,-3.328,-21.653)
C5': (-12.811,-4.962,-23.887)
O6: (-8.995,2.515,-21.944)
O4': (-10.843,-4.026,-22.833)
C8: (-10.874,-1.181,-23.003)
C2: (-8.146,-0.169,-19.758)
C6: (-8.986,1.364,-21.485)
C5: (-9.679,0.217,-21.958)
C4: (-9.532,-0.986,-21.288)
P: (-12.675,-3.190,-25.830)
C4': (-12.047,-4.798,-22.603)
C2': (-11.603,-3.570,-20.620)
O2': (-11.187,-4.612,-19.751)
N1: (-8.230,1.069,-20.353)
N2: (-7.359,-0.252,-18.676)
N3: (-8.786,-1.245,-20.191)
N7: (-10.532,0.077,-23.042)
N9: (-10.316,-1.893,-21.972)
O5': (-12.103,-4.414,-24.980)
O3': (-13.725,-4.820,-20.832)
Image (generated by PyMOL):