ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61285:61318

Extra

PDB:
ATOM 1 O3' U A1284 267.123 -9.708 253.020 1.00 69.21 O
ATOM 2 P G A1285 267.800 -8.538 252.164 1.00 67.23 P
ATOM 3 OP1 G A1285 267.229 -7.233 252.656 1.00 67.12 O
ATOM 4 OP2 G A1285 267.627 -8.895 250.727 1.00 67.04 O
ATOM 5 O5' G A1285 269.336 -8.688 252.587 1.00 67.84 O
ATOM 6 C5' G A1285 270.226 -7.586 252.647 1.00 68.23 C
ATOM 7 C4' G A1285 271.381 -7.884 253.574 1.00 68.77 C
ATOM 8 O4' G A1285 271.731 -9.280 253.477 1.00 68.86 O
ATOM 9 C3' G A1285 272.680 -7.178 253.278 1.00 69.31 C
ATOM 10 O3' G A1285 272.699 -5.871 253.743 1.00 69.42 O
ATOM 11 C2' G A1285 273.698 -8.073 253.945 1.00 69.79 C
ATOM 12 O2' G A1285 273.628 -7.928 255.354 1.00 69.91 O
ATOM 13 C1' G A1285 273.130 -9.433 253.585 1.00 69.47 C
ATOM 14 N9 G A1285 273.641 -9.937 252.289 1.00 69.58 N
ATOM 15 C8 G A1285 274.954 -10.139 251.934 1.00 70.16 C
ATOM 16 N7 G A1285 275.078 -10.600 250.720 1.00 70.14 N
ATOM 17 C5 G A1285 273.778 -10.712 250.232 1.00 69.51 C
ATOM 18 C6 G A1285 273.285 -11.157 248.974 1.00 69.23 C
ATOM 19 O6 G A1285 273.880 -11.569 247.967 1.00 69.47 O
ATOM 20 N1 G A1285 271.914 -11.089 248.925 1.00 68.62 N
ATOM 21 C2 G A1285 271.109 -10.668 249.926 1.00 68.33 C
ATOM 22 N2 G A1285 269.803 -10.702 249.639 1.00 67.78 N
ATOM 23 N3 G A1285 271.534 -10.249 251.088 1.00 68.58 N
ATOM 24 C4 G A1285 272.872 -10.291 251.183 1.00 69.16 C
ATOM 25 P G A1286 272.842 -4.699 252.687 1.00 68.72 P
ATOM 26 OP1 G A1286 272.395 -3.438 253.362 1.00 68.67 O
ATOM 27 OP2 G A1286 272.147 -5.139 251.442 1.00 68.29 O
ATOM 28 O5' G A1286 274.416 -4.668 252.433 1.00 69.40 O
TER

ATOM 1 O3' C B1317 282.946 -13.195 241.310 1.00 70.41 O
ATOM 2 P G B1318 282.770 -14.677 241.857 1.00 75.83 P
ATOM 3 OP1 G B1318 284.045 -15.380 241.531 1.00 76.69 O
ATOM 4 OP2 G B1318 281.507 -15.217 241.318 1.00 75.14 O
ATOM 5 O5' G B1318 282.658 -14.457 243.428 1.00 75.67 O
ATOM 6 C5' G B1318 283.801 -14.041 244.152 1.00 76.32 C
ATOM 7 C4' G B1318 283.462 -13.604 245.541 1.00 76.05 C
ATOM 8 O4' G B1318 282.486 -12.528 245.499 1.00 75.42 O
ATOM 9 C3' G B1318 282.794 -14.634 246.429 1.00 75.66 C
ATOM 10 O3' G B1318 283.674 -15.610 246.919 1.00 76.23 O
ATOM 11 C2' G B1318 282.211 -13.746 247.505 1.00 75.27 C
ATOM 12 O2' G B1318 283.256 -13.190 248.298 1.00 75.88 O
ATOM 13 C1' G B1318 281.634 -12.634 246.629 1.00 74.91 C
ATOM 14 N9 G B1318 280.280 -12.969 246.155 1.00 74.14 N
ATOM 15 C8 G B1318 279.929 -13.644 245.007 1.00 73.99 C
ATOM 16 N7 G B1318 278.646 -13.811 244.862 1.00 73.29 N
ATOM 17 C5 G B1318 278.104 -13.187 245.982 1.00 72.96 C
ATOM 18 C6 G B1318 276.749 -13.033 246.387 1.00 72.25 C
ATOM 19 O6 G B1318 275.743 -13.438 245.783 1.00 71.76 O
ATOM 20 N1 G B1318 276.659 -12.354 247.608 1.00 72.20 N
ATOM 21 C2 G B1318 277.748 -11.888 248.323 1.00 72.76 C
ATOM 22 N2 G B1318 277.545 -11.251 249.481 1.00 72.68 N
ATOM 23 N3 G B1318 279.005 -12.028 247.957 1.00 73.42 N
ATOM 24 C4 G B1318 279.107 -12.681 246.788 1.00 73.48 C
ATOM 25 P A B1319 283.108 -17.025 247.417 1.00 81.37 P
ATOM 26 OP1 A B1319 284.281 -17.922 247.575 1.00 82.13 O
ATOM 27 OP2 A B1319 282.022 -17.424 246.488 1.00 80.77 O
ATOM 28 O5' A B1319 282.503 -16.663 248.844 1.00 80.97 O
TER

Atoms:
OP1: (267.229,-7.233,252.656)
OP2: (267.627,-8.895,250.727)
C3': (272.680,-7.178,253.278)
C1': (273.130,-9.433,253.585)
C5': (270.226,-7.586,252.647)
O6: (273.880,-11.569,247.967)
O4': (271.731,-9.280,253.477)
C8: (274.954,-10.139,251.934)
C2: (271.109,-10.668,249.926)
C6: (273.285,-11.157,248.974)
C5: (273.778,-10.712,250.232)
C4: (272.872,-10.291,251.183)
P: (267.800,-8.538,252.164)
C4': (271.381,-7.884,253.574)
C2': (273.698,-8.073,253.945)
O2': (273.628,-7.928,255.354)
N1: (271.914,-11.089,248.925)
N2: (269.803,-10.702,249.639)
N3: (271.534,-10.249,251.088)
N7: (275.078,-10.600,250.720)
N9: (273.641,-9.937,252.289)
O5': (269.336,-8.688,252.587)
O3': (272.699,-5.871,253.743)
OP1: (284.045,-15.380,241.531)
OP2: (281.507,-15.217,241.318)
C3': (282.794,-14.634,246.429)
C1': (281.634,-12.634,246.629)
C5': (283.801,-14.041,244.152)
O6: (275.743,-13.438,245.783)
O4': (282.486,-12.528,245.499)
C8: (279.929,-13.644,245.007)
C2: (277.748,-11.888,248.323)
C6: (276.749,-13.033,246.387)
C5: (278.104,-13.187,245.982)
C4: (279.107,-12.681,246.788)
P: (282.770,-14.677,241.857)
C4': (283.462,-13.604,245.541)
C2': (282.211,-13.746,247.505)
O2': (283.256,-13.190,248.298)
N1: (276.659,-12.354,247.608)
N2: (277.545,-11.251,249.481)
N3: (279.005,-12.028,247.957)
N7: (278.646,-13.811,244.862)
N9: (280.280,-12.969,246.155)
O5': (282.658,-14.457,243.428)
O3': (283.674,-15.610,246.919)
Image (generated by PyMOL):
PyMOL image
show in jmol