Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A9:A11
Extra
PDB:
ATOM 1 O3' U A 8 1.987 -4.172 37.467 1.00 18.18 O
ATOM 2 P A A 9 1.360 -2.852 38.126 1.00 19.14 P
ATOM 3 OP1 A A 9 1.930 -2.713 39.491 1.00 18.06 O
ATOM 4 OP2 A A 9 -0.110 -2.988 37.972 1.00 18.40 O
ATOM 5 O5' A A 9 1.921 -1.723 37.148 1.00 17.58 O
ATOM 6 C5' A A 9 1.416 -0.395 37.226 1.00 17.34 C
ATOM 7 C4' A A 9 2.274 0.568 36.443 1.00 17.26 C
ATOM 8 O4' A A 9 3.662 0.424 36.840 1.00 17.13 O
ATOM 9 C3' A A 9 2.299 0.433 34.927 1.00 16.86 C
ATOM 10 O3' A A 9 1.183 1.058 34.323 1.00 16.71 O
ATOM 11 C2' A A 9 3.608 1.131 34.571 1.00 17.11 C
ATOM 12 O2' A A 9 3.425 2.540 34.593 1.00 17.94 O
ATOM 13 C1' A A 9 4.500 0.749 35.751 1.00 17.31 C
ATOM 14 N9 A A 9 5.468 -0.337 35.461 1.00 17.57 N
ATOM 15 C8 A A 9 6.654 -0.547 36.120 1.00 17.71 C
ATOM 16 N7 A A 9 7.346 -1.562 35.669 1.00 17.84 N
ATOM 17 C5 A A 9 6.566 -2.053 34.634 1.00 17.80 C
ATOM 18 C6 A A 9 6.756 -3.130 33.756 1.00 17.77 C
ATOM 19 N6 A A 9 7.828 -3.922 33.793 1.00 17.78 N
ATOM 20 N1 A A 9 5.800 -3.366 32.833 1.00 17.85 N
ATOM 21 C2 A A 9 4.730 -2.563 32.806 1.00 17.83 C
ATOM 22 N3 A A 9 4.440 -1.519 33.578 1.00 17.88 N
ATOM 23 C4 A A 9 5.408 -1.310 34.488 1.00 17.76 C
ATOM 24 P A A 10 0.026 0.247 33.560 1.00 17.79 P
ATOM 25 OP1 A A 10 -1.150 1.149 33.586 1.00 17.62 O
ATOM 26 OP2 A A 10 -0.061 -1.080 34.219 1.00 18.37 O
ATOM 27 O5' A A 10 0.547 0.085 32.065 1.00 17.33 O
TER
ATOM 1 O3' A B 10 2.252 -0.540 28.579 1.00 18.08 O
ATOM 2 P C B 11 2.455 0.980 28.102 1.00 18.05 P
ATOM 3 OP1 C B 11 1.239 1.730 28.511 1.00 18.35 O
ATOM 4 OP2 C B 11 2.832 0.923 26.667 1.00 17.04 O
ATOM 5 O5' C B 11 3.706 1.414 28.983 1.00 16.95 O
ATOM 6 C5' C B 11 3.548 2.240 30.132 1.00 17.04 C
ATOM 7 C4' C B 11 4.760 2.120 31.012 1.00 17.33 C
ATOM 8 O4' C B 11 4.885 0.757 31.491 1.00 17.84 O
ATOM 9 C3' C B 11 6.091 2.409 30.337 1.00 17.85 C
ATOM 10 O3' C B 11 6.376 3.790 30.221 1.00 18.09 O
ATOM 11 C2' C B 11 7.068 1.641 31.223 1.00 18.36 C
ATOM 12 O2' C B 11 7.300 2.364 32.423 1.00 18.41 O
ATOM 13 C1' C B 11 6.249 0.399 31.576 1.00 18.14 C
ATOM 14 N1 C B 11 6.509 -0.712 30.635 1.00 17.88 N
ATOM 15 C2 C B 11 7.681 -1.461 30.780 1.00 18.08 C
ATOM 16 O2 C B 11 8.468 -1.174 31.694 1.00 18.07 O
ATOM 17 N3 C B 11 7.927 -2.475 29.920 1.00 18.09 N
ATOM 18 C4 C B 11 7.056 -2.754 28.949 1.00 18.17 C
ATOM 19 N4 C B 11 7.338 -3.766 28.123 1.00 18.01 N
ATOM 20 C5 C B 11 5.854 -2.008 28.780 1.00 17.51 C
ATOM 21 C6 C B 11 5.624 -1.007 29.636 1.00 17.47 C
ATOM 22 P C B 12 7.270 4.327 28.997 1.00 18.26 P
ATOM 23 OP1 C B 12 7.170 5.805 29.026 1.00 18.35 O
ATOM 24 OP2 C B 12 6.852 3.599 27.774 1.00 18.90 O
ATOM 25 O5' C B 12 8.720 3.850 29.437 1.00 18.41 O
TER
ATOM 2 P A A 9 1.360 -2.852 38.126 1.00 19.14 P
ATOM 3 OP1 A A 9 1.930 -2.713 39.491 1.00 18.06 O
ATOM 4 OP2 A A 9 -0.110 -2.988 37.972 1.00 18.40 O
ATOM 5 O5' A A 9 1.921 -1.723 37.148 1.00 17.58 O
ATOM 6 C5' A A 9 1.416 -0.395 37.226 1.00 17.34 C
ATOM 7 C4' A A 9 2.274 0.568 36.443 1.00 17.26 C
ATOM 8 O4' A A 9 3.662 0.424 36.840 1.00 17.13 O
ATOM 9 C3' A A 9 2.299 0.433 34.927 1.00 16.86 C
ATOM 10 O3' A A 9 1.183 1.058 34.323 1.00 16.71 O
ATOM 11 C2' A A 9 3.608 1.131 34.571 1.00 17.11 C
ATOM 12 O2' A A 9 3.425 2.540 34.593 1.00 17.94 O
ATOM 13 C1' A A 9 4.500 0.749 35.751 1.00 17.31 C
ATOM 14 N9 A A 9 5.468 -0.337 35.461 1.00 17.57 N
ATOM 15 C8 A A 9 6.654 -0.547 36.120 1.00 17.71 C
ATOM 16 N7 A A 9 7.346 -1.562 35.669 1.00 17.84 N
ATOM 17 C5 A A 9 6.566 -2.053 34.634 1.00 17.80 C
ATOM 18 C6 A A 9 6.756 -3.130 33.756 1.00 17.77 C
ATOM 19 N6 A A 9 7.828 -3.922 33.793 1.00 17.78 N
ATOM 20 N1 A A 9 5.800 -3.366 32.833 1.00 17.85 N
ATOM 21 C2 A A 9 4.730 -2.563 32.806 1.00 17.83 C
ATOM 22 N3 A A 9 4.440 -1.519 33.578 1.00 17.88 N
ATOM 23 C4 A A 9 5.408 -1.310 34.488 1.00 17.76 C
ATOM 24 P A A 10 0.026 0.247 33.560 1.00 17.79 P
ATOM 25 OP1 A A 10 -1.150 1.149 33.586 1.00 17.62 O
ATOM 26 OP2 A A 10 -0.061 -1.080 34.219 1.00 18.37 O
ATOM 27 O5' A A 10 0.547 0.085 32.065 1.00 17.33 O
TER
ATOM 1 O3' A B 10 2.252 -0.540 28.579 1.00 18.08 O
ATOM 2 P C B 11 2.455 0.980 28.102 1.00 18.05 P
ATOM 3 OP1 C B 11 1.239 1.730 28.511 1.00 18.35 O
ATOM 4 OP2 C B 11 2.832 0.923 26.667 1.00 17.04 O
ATOM 5 O5' C B 11 3.706 1.414 28.983 1.00 16.95 O
ATOM 6 C5' C B 11 3.548 2.240 30.132 1.00 17.04 C
ATOM 7 C4' C B 11 4.760 2.120 31.012 1.00 17.33 C
ATOM 8 O4' C B 11 4.885 0.757 31.491 1.00 17.84 O
ATOM 9 C3' C B 11 6.091 2.409 30.337 1.00 17.85 C
ATOM 10 O3' C B 11 6.376 3.790 30.221 1.00 18.09 O
ATOM 11 C2' C B 11 7.068 1.641 31.223 1.00 18.36 C
ATOM 12 O2' C B 11 7.300 2.364 32.423 1.00 18.41 O
ATOM 13 C1' C B 11 6.249 0.399 31.576 1.00 18.14 C
ATOM 14 N1 C B 11 6.509 -0.712 30.635 1.00 17.88 N
ATOM 15 C2 C B 11 7.681 -1.461 30.780 1.00 18.08 C
ATOM 16 O2 C B 11 8.468 -1.174 31.694 1.00 18.07 O
ATOM 17 N3 C B 11 7.927 -2.475 29.920 1.00 18.09 N
ATOM 18 C4 C B 11 7.056 -2.754 28.949 1.00 18.17 C
ATOM 19 N4 C B 11 7.338 -3.766 28.123 1.00 18.01 N
ATOM 20 C5 C B 11 5.854 -2.008 28.780 1.00 17.51 C
ATOM 21 C6 C B 11 5.624 -1.007 29.636 1.00 17.47 C
ATOM 22 P C B 12 7.270 4.327 28.997 1.00 18.26 P
ATOM 23 OP1 C B 12 7.170 5.805 29.026 1.00 18.35 O
ATOM 24 OP2 C B 12 6.852 3.599 27.774 1.00 18.90 O
ATOM 25 O5' C B 12 8.720 3.850 29.437 1.00 18.41 O
TER
Atoms:
OP1: (1.930,-2.713,39.491)
OP2: (-0.110,-2.988,37.972)
C3': (2.299,0.433,34.927)
C1': (4.500,0.749,35.751)
C5': (1.416,-0.395,37.226)
O4': (3.662,0.424,36.840)
C8: (6.654,-0.547,36.120)
O2': (3.425,2.540,34.593)
C6: (6.756,-3.130,33.756)
C5: (6.566,-2.053,34.634)
C4: (5.408,-1.310,34.488)
P: (1.360,-2.852,38.126)
C4': (2.274,0.568,36.443)
C2': (3.608,1.131,34.571)
C2: (4.730,-2.563,32.806)
N1: (5.800,-3.366,32.833)
N3: (4.440,-1.519,33.578)
N6: (7.828,-3.922,33.793)
N7: (7.346,-1.562,35.669)
N9: (5.468,-0.337,35.461)
O5': (1.921,-1.723,37.148)
O3': (1.183,1.058,34.323)
OP2: (-0.110,-2.988,37.972)
C3': (2.299,0.433,34.927)
C1': (4.500,0.749,35.751)
C5': (1.416,-0.395,37.226)
O4': (3.662,0.424,36.840)
C8: (6.654,-0.547,36.120)
O2': (3.425,2.540,34.593)
C6: (6.756,-3.130,33.756)
C5: (6.566,-2.053,34.634)
C4: (5.408,-1.310,34.488)
P: (1.360,-2.852,38.126)
C4': (2.274,0.568,36.443)
C2': (3.608,1.131,34.571)
C2: (4.730,-2.563,32.806)
N1: (5.800,-3.366,32.833)
N3: (4.440,-1.519,33.578)
N6: (7.828,-3.922,33.793)
N7: (7.346,-1.562,35.669)
N9: (5.468,-0.337,35.461)
O5': (1.921,-1.723,37.148)
O3': (1.183,1.058,34.323)
C2: (7.681,-1.461,30.780)
OP1: (1.239,1.730,28.511)
OP2: (2.832,0.923,26.667)
C4: (7.056,-2.754,28.949)
O5': (3.706,1.414,28.983)
C3': (6.091,2.409,30.337)
C1': (6.249,0.399,31.576)
O4': (4.885,0.757,31.491)
C5': (3.548,2.240,30.132)
P: (2.455,0.980,28.102)
O2: (8.468,-1.174,31.694)
C4': (4.760,2.120,31.012)
C2': (7.068,1.641,31.223)
O2': (7.300,2.364,32.423)
N1: (6.509,-0.712,30.635)
N3: (7.927,-2.475,29.920)
N4: (7.338,-3.766,28.123)
C6: (5.624,-1.007,29.636)
C5: (5.854,-2.008,28.780)
O3': (6.376,3.790,30.221)
OP1: (1.239,1.730,28.511)
OP2: (2.832,0.923,26.667)
C4: (7.056,-2.754,28.949)
O5': (3.706,1.414,28.983)
C3': (6.091,2.409,30.337)
C1': (6.249,0.399,31.576)
O4': (4.885,0.757,31.491)
C5': (3.548,2.240,30.132)
P: (2.455,0.980,28.102)
O2: (8.468,-1.174,31.694)
C4': (4.760,2.120,31.012)
C2': (7.068,1.641,31.223)
O2': (7.300,2.364,32.423)
N1: (6.509,-0.712,30.635)
N3: (7.927,-2.475,29.920)
N4: (7.338,-3.766,28.123)
C6: (5.624,-1.007,29.636)
C5: (5.854,-2.008,28.780)
O3': (6.376,3.790,30.221)
Image (generated by PyMOL):