Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V20:V47
Extra
PDB:
ATOM 1 O3' U A 19 -126.222 4.417 33.793 1.00127.33 O
ATOM 2 P A A 20 -124.904 4.109 32.923 1.00 97.53 P
ATOM 3 OP1 A A 20 -124.560 5.361 32.191 1.00 97.53 O
ATOM 4 OP2 A A 20 -125.179 2.876 32.136 1.00 97.53 O
ATOM 5 O5' A A 20 -123.803 3.811 34.045 1.00 97.53 O
ATOM 6 C5' A A 20 -122.663 4.646 34.196 1.00 97.53 C
ATOM 7 C4' A A 20 -121.514 4.162 33.351 1.00 97.53 C
ATOM 8 O4' A A 20 -121.418 2.725 33.439 1.00 97.53 O
ATOM 9 C3' A A 20 -121.626 4.431 31.859 1.00 97.53 C
ATOM 10 O3' A A 20 -121.225 5.744 31.515 1.00 97.53 O
ATOM 11 C2' A A 20 -120.746 3.351 31.238 1.00 97.53 C
ATOM 12 O2' A A 20 -119.393 3.776 31.178 1.00 97.53 O
ATOM 13 C1' A A 20 -120.857 2.211 32.253 1.00 97.53 C
ATOM 14 N9 A A 20 -121.683 1.088 31.767 1.00 97.06 N
ATOM 15 C8 A A 20 -123.018 0.975 31.478 1.00 97.06 C
ATOM 16 N7 A A 20 -123.373 -0.223 31.072 1.00 97.06 N
ATOM 17 C5 A A 20 -122.186 -0.942 31.098 1.00 97.06 C
ATOM 18 C6 A A 20 -121.853 -2.275 30.789 1.00 97.06 C
ATOM 19 N6 A A 20 -122.724 -3.198 30.372 1.00 97.06 N
ATOM 20 N1 A A 20 -120.558 -2.643 30.937 1.00 97.06 N
ATOM 21 C2 A A 20 -119.657 -1.745 31.364 1.00 97.06 C
ATOM 22 N3 A A 20 -119.848 -0.474 31.682 1.00 97.06 N
ATOM 23 C4 A A 20 -121.144 -0.141 31.524 1.00 97.06 C
ATOM 24 P G A 21 -122.046 6.586 30.420 1.00 90.73 P
ATOM 25 OP1 G A 21 -122.772 7.661 31.152 1.00 90.73 O
ATOM 26 OP2 G A 21 -122.830 5.607 29.606 1.00 90.73 O
ATOM 27 O5' G A 21 -120.891 7.224 29.535 1.00 90.73 O
TER
ATOM 1 O3' U B 46 -125.475 -6.444 33.101 1.00109.22 O
ATOM 2 P C B 47 -124.834 -5.859 34.459 1.00 68.48 P
ATOM 3 OP1 C B 47 -125.271 -6.746 35.573 1.00 68.48 O
ATOM 4 OP2 C B 47 -125.188 -4.411 34.517 1.00 68.48 O
ATOM 5 O5' C B 47 -123.261 -6.028 34.210 1.00 68.48 O
ATOM 6 C5' C B 47 -122.741 -6.300 32.906 1.00 68.48 C
ATOM 7 C4' C B 47 -121.226 -6.264 32.882 1.00 68.48 C
ATOM 8 O4' C B 47 -120.789 -4.907 32.617 1.00 68.48 O
ATOM 9 C3' C B 47 -120.547 -6.692 34.180 1.00 68.48 C
ATOM 10 O3' C B 47 -119.368 -7.441 33.905 1.00 68.48 O
ATOM 11 C2' C B 47 -120.179 -5.373 34.849 1.00 68.48 C
ATOM 12 O2' C B 47 -119.033 -5.426 35.673 1.00 68.48 O
ATOM 13 C1' C B 47 -119.959 -4.441 33.664 1.00 68.48 C
ATOM 14 N1 C B 47 -120.335 -3.045 33.963 1.00 68.29 N
ATOM 15 C2 C B 47 -119.426 -2.211 34.613 1.00 68.29 C
ATOM 16 O2 C B 47 -118.296 -2.663 34.877 1.00 68.29 O
ATOM 17 N3 C B 47 -119.813 -0.944 34.917 1.00 68.29 N
ATOM 18 C4 C B 47 -121.042 -0.518 34.605 1.00 68.29 C
ATOM 19 N4 C B 47 -121.410 0.727 34.902 1.00 68.29 N
ATOM 20 C5 C B 47 -121.987 -1.356 33.967 1.00 68.29 C
ATOM 21 C6 C B 47 -121.596 -2.600 33.680 1.00 68.29 C
ATOM 22 P C B 48 -118.707 -8.328 35.074 1.00 81.18 P
ATOM 23 OP1 C B 48 -119.388 -7.950 36.342 1.00 81.18 O
ATOM 24 OP2 C B 48 -117.222 -8.159 34.975 1.00 81.18 O
ATOM 25 O5' C B 48 -119.117 -9.818 34.675 1.00 81.18 O
TER
ATOM 2 P A A 20 -124.904 4.109 32.923 1.00 97.53 P
ATOM 3 OP1 A A 20 -124.560 5.361 32.191 1.00 97.53 O
ATOM 4 OP2 A A 20 -125.179 2.876 32.136 1.00 97.53 O
ATOM 5 O5' A A 20 -123.803 3.811 34.045 1.00 97.53 O
ATOM 6 C5' A A 20 -122.663 4.646 34.196 1.00 97.53 C
ATOM 7 C4' A A 20 -121.514 4.162 33.351 1.00 97.53 C
ATOM 8 O4' A A 20 -121.418 2.725 33.439 1.00 97.53 O
ATOM 9 C3' A A 20 -121.626 4.431 31.859 1.00 97.53 C
ATOM 10 O3' A A 20 -121.225 5.744 31.515 1.00 97.53 O
ATOM 11 C2' A A 20 -120.746 3.351 31.238 1.00 97.53 C
ATOM 12 O2' A A 20 -119.393 3.776 31.178 1.00 97.53 O
ATOM 13 C1' A A 20 -120.857 2.211 32.253 1.00 97.53 C
ATOM 14 N9 A A 20 -121.683 1.088 31.767 1.00 97.06 N
ATOM 15 C8 A A 20 -123.018 0.975 31.478 1.00 97.06 C
ATOM 16 N7 A A 20 -123.373 -0.223 31.072 1.00 97.06 N
ATOM 17 C5 A A 20 -122.186 -0.942 31.098 1.00 97.06 C
ATOM 18 C6 A A 20 -121.853 -2.275 30.789 1.00 97.06 C
ATOM 19 N6 A A 20 -122.724 -3.198 30.372 1.00 97.06 N
ATOM 20 N1 A A 20 -120.558 -2.643 30.937 1.00 97.06 N
ATOM 21 C2 A A 20 -119.657 -1.745 31.364 1.00 97.06 C
ATOM 22 N3 A A 20 -119.848 -0.474 31.682 1.00 97.06 N
ATOM 23 C4 A A 20 -121.144 -0.141 31.524 1.00 97.06 C
ATOM 24 P G A 21 -122.046 6.586 30.420 1.00 90.73 P
ATOM 25 OP1 G A 21 -122.772 7.661 31.152 1.00 90.73 O
ATOM 26 OP2 G A 21 -122.830 5.607 29.606 1.00 90.73 O
ATOM 27 O5' G A 21 -120.891 7.224 29.535 1.00 90.73 O
TER
ATOM 1 O3' U B 46 -125.475 -6.444 33.101 1.00109.22 O
ATOM 2 P C B 47 -124.834 -5.859 34.459 1.00 68.48 P
ATOM 3 OP1 C B 47 -125.271 -6.746 35.573 1.00 68.48 O
ATOM 4 OP2 C B 47 -125.188 -4.411 34.517 1.00 68.48 O
ATOM 5 O5' C B 47 -123.261 -6.028 34.210 1.00 68.48 O
ATOM 6 C5' C B 47 -122.741 -6.300 32.906 1.00 68.48 C
ATOM 7 C4' C B 47 -121.226 -6.264 32.882 1.00 68.48 C
ATOM 8 O4' C B 47 -120.789 -4.907 32.617 1.00 68.48 O
ATOM 9 C3' C B 47 -120.547 -6.692 34.180 1.00 68.48 C
ATOM 10 O3' C B 47 -119.368 -7.441 33.905 1.00 68.48 O
ATOM 11 C2' C B 47 -120.179 -5.373 34.849 1.00 68.48 C
ATOM 12 O2' C B 47 -119.033 -5.426 35.673 1.00 68.48 O
ATOM 13 C1' C B 47 -119.959 -4.441 33.664 1.00 68.48 C
ATOM 14 N1 C B 47 -120.335 -3.045 33.963 1.00 68.29 N
ATOM 15 C2 C B 47 -119.426 -2.211 34.613 1.00 68.29 C
ATOM 16 O2 C B 47 -118.296 -2.663 34.877 1.00 68.29 O
ATOM 17 N3 C B 47 -119.813 -0.944 34.917 1.00 68.29 N
ATOM 18 C4 C B 47 -121.042 -0.518 34.605 1.00 68.29 C
ATOM 19 N4 C B 47 -121.410 0.727 34.902 1.00 68.29 N
ATOM 20 C5 C B 47 -121.987 -1.356 33.967 1.00 68.29 C
ATOM 21 C6 C B 47 -121.596 -2.600 33.680 1.00 68.29 C
ATOM 22 P C B 48 -118.707 -8.328 35.074 1.00 81.18 P
ATOM 23 OP1 C B 48 -119.388 -7.950 36.342 1.00 81.18 O
ATOM 24 OP2 C B 48 -117.222 -8.159 34.975 1.00 81.18 O
ATOM 25 O5' C B 48 -119.117 -9.818 34.675 1.00 81.18 O
TER
Atoms:
OP1: (-124.560,5.361,32.191)
OP2: (-125.179,2.876,32.136)
C3': (-121.626,4.431,31.859)
C1': (-120.857,2.211,32.253)
C5': (-122.663,4.646,34.196)
O4': (-121.418,2.725,33.439)
C8: (-123.018,0.975,31.478)
O2': (-119.393,3.776,31.178)
C6: (-121.853,-2.275,30.789)
C5: (-122.186,-0.942,31.098)
C4: (-121.144,-0.141,31.524)
P: (-124.904,4.109,32.923)
C4': (-121.514,4.162,33.351)
C2': (-120.746,3.351,31.238)
C2: (-119.657,-1.745,31.364)
N1: (-120.558,-2.643,30.937)
N3: (-119.848,-0.474,31.682)
N6: (-122.724,-3.198,30.372)
N7: (-123.373,-0.223,31.072)
N9: (-121.683,1.088,31.767)
O5': (-123.803,3.811,34.045)
O3': (-121.225,5.744,31.515)
OP2: (-125.179,2.876,32.136)
C3': (-121.626,4.431,31.859)
C1': (-120.857,2.211,32.253)
C5': (-122.663,4.646,34.196)
O4': (-121.418,2.725,33.439)
C8: (-123.018,0.975,31.478)
O2': (-119.393,3.776,31.178)
C6: (-121.853,-2.275,30.789)
C5: (-122.186,-0.942,31.098)
C4: (-121.144,-0.141,31.524)
P: (-124.904,4.109,32.923)
C4': (-121.514,4.162,33.351)
C2': (-120.746,3.351,31.238)
C2: (-119.657,-1.745,31.364)
N1: (-120.558,-2.643,30.937)
N3: (-119.848,-0.474,31.682)
N6: (-122.724,-3.198,30.372)
N7: (-123.373,-0.223,31.072)
N9: (-121.683,1.088,31.767)
O5': (-123.803,3.811,34.045)
O3': (-121.225,5.744,31.515)
C2: (-119.426,-2.211,34.613)
OP1: (-125.271,-6.746,35.573)
OP2: (-125.188,-4.411,34.517)
C4: (-121.042,-0.518,34.605)
O5': (-123.261,-6.028,34.210)
C3': (-120.547,-6.692,34.180)
C1': (-119.959,-4.441,33.664)
O4': (-120.789,-4.907,32.617)
C5': (-122.741,-6.300,32.906)
P: (-124.834,-5.859,34.459)
O2: (-118.296,-2.663,34.877)
C4': (-121.226,-6.264,32.882)
C2': (-120.179,-5.373,34.849)
O2': (-119.033,-5.426,35.673)
N1: (-120.335,-3.045,33.963)
N3: (-119.813,-0.944,34.917)
N4: (-121.410,0.727,34.902)
C6: (-121.596,-2.600,33.680)
C5: (-121.987,-1.356,33.967)
O3': (-119.368,-7.441,33.905)
OP1: (-125.271,-6.746,35.573)
OP2: (-125.188,-4.411,34.517)
C4: (-121.042,-0.518,34.605)
O5': (-123.261,-6.028,34.210)
C3': (-120.547,-6.692,34.180)
C1': (-119.959,-4.441,33.664)
O4': (-120.789,-4.907,32.617)
C5': (-122.741,-6.300,32.906)
P: (-124.834,-5.859,34.459)
O2: (-118.296,-2.663,34.877)
C4': (-121.226,-6.264,32.882)
C2': (-120.179,-5.373,34.849)
O2': (-119.033,-5.426,35.673)
N1: (-120.335,-3.045,33.963)
N3: (-119.813,-0.944,34.917)
N4: (-121.410,0.727,34.902)
C6: (-121.596,-2.600,33.680)
C5: (-121.987,-1.356,33.967)
O3': (-119.368,-7.441,33.905)
Image (generated by PyMOL):