Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D8:D10
Extra
PDB:
ATOM 1 O3' U A 7 25.580 -8.278 -80.215 1.00 48.08 O
ATOM 2 P A A 8 24.653 -9.110 -81.232 1.00 52.44 P
ATOM 3 OP1 A A 8 25.532 -10.075 -81.938 1.00 44.63 O
ATOM 4 OP2 A A 8 23.888 -8.121 -82.032 1.00 39.11 O
ATOM 5 O5' A A 8 23.671 -9.888 -80.253 1.00 48.47 O
ATOM 6 C5' A A 8 22.937 -9.185 -79.264 1.00 49.13 C
ATOM 7 C4' A A 8 22.393 -10.108 -78.204 1.00 45.43 C
ATOM 8 O4' A A 8 23.453 -10.959 -77.711 1.00 48.52 O
ATOM 9 C3' A A 8 21.849 -9.426 -76.957 1.00 44.94 C
ATOM 10 O3' A A 8 20.517 -8.964 -77.114 1.00 56.58 O
ATOM 11 C2' A A 8 21.998 -10.496 -75.880 1.00 43.28 C
ATOM 12 O2' A A 8 20.892 -11.386 -75.902 1.00 50.65 O
ATOM 13 C1' A A 8 23.242 -11.257 -76.349 1.00 45.94 C
ATOM 14 N9 A A 8 24.455 -10.891 -75.591 1.00 44.94 N
ATOM 15 C8 A A 8 25.408 -11.767 -75.129 1.00 43.31 C
ATOM 16 N7 A A 8 26.400 -11.194 -74.497 1.00 46.19 N
ATOM 17 C5 A A 8 26.086 -9.845 -74.550 1.00 42.96 C
ATOM 18 C6 A A 8 26.752 -8.711 -74.054 1.00 38.05 C
ATOM 19 N6 A A 8 27.907 -8.763 -73.387 1.00 34.91 N
ATOM 20 N1 A A 8 26.183 -7.507 -74.271 1.00 40.58 N
ATOM 21 C2 A A 8 25.025 -7.459 -74.941 1.00 40.85 C
ATOM 22 N3 A A 8 24.303 -8.453 -75.456 1.00 44.09 N
ATOM 23 C4 A A 8 24.894 -9.639 -75.226 1.00 45.66 C
ATOM 24 P A A 9 20.218 -7.486 -77.683 1.00 47.19 P
ATOM 25 OP1 A A 9 18.768 -7.440 -78.023 1.00 38.58 O
ATOM 26 OP2 A A 9 21.221 -7.206 -78.755 1.00 50.00 O
ATOM 27 O5' A A 9 20.504 -6.559 -76.424 1.00 51.26 O
TER
ATOM 1 O3' A B 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 2 P C B 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C B 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C B 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C B 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C B 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C B 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C B 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C B 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C B 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C B 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C B 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C B 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C B 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C B 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C B 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C B 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C B 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C B 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C B 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C B 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U B 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U B 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U B 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U B 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
ATOM 2 P A A 8 24.653 -9.110 -81.232 1.00 52.44 P
ATOM 3 OP1 A A 8 25.532 -10.075 -81.938 1.00 44.63 O
ATOM 4 OP2 A A 8 23.888 -8.121 -82.032 1.00 39.11 O
ATOM 5 O5' A A 8 23.671 -9.888 -80.253 1.00 48.47 O
ATOM 6 C5' A A 8 22.937 -9.185 -79.264 1.00 49.13 C
ATOM 7 C4' A A 8 22.393 -10.108 -78.204 1.00 45.43 C
ATOM 8 O4' A A 8 23.453 -10.959 -77.711 1.00 48.52 O
ATOM 9 C3' A A 8 21.849 -9.426 -76.957 1.00 44.94 C
ATOM 10 O3' A A 8 20.517 -8.964 -77.114 1.00 56.58 O
ATOM 11 C2' A A 8 21.998 -10.496 -75.880 1.00 43.28 C
ATOM 12 O2' A A 8 20.892 -11.386 -75.902 1.00 50.65 O
ATOM 13 C1' A A 8 23.242 -11.257 -76.349 1.00 45.94 C
ATOM 14 N9 A A 8 24.455 -10.891 -75.591 1.00 44.94 N
ATOM 15 C8 A A 8 25.408 -11.767 -75.129 1.00 43.31 C
ATOM 16 N7 A A 8 26.400 -11.194 -74.497 1.00 46.19 N
ATOM 17 C5 A A 8 26.086 -9.845 -74.550 1.00 42.96 C
ATOM 18 C6 A A 8 26.752 -8.711 -74.054 1.00 38.05 C
ATOM 19 N6 A A 8 27.907 -8.763 -73.387 1.00 34.91 N
ATOM 20 N1 A A 8 26.183 -7.507 -74.271 1.00 40.58 N
ATOM 21 C2 A A 8 25.025 -7.459 -74.941 1.00 40.85 C
ATOM 22 N3 A A 8 24.303 -8.453 -75.456 1.00 44.09 N
ATOM 23 C4 A A 8 24.894 -9.639 -75.226 1.00 45.66 C
ATOM 24 P A A 9 20.218 -7.486 -77.683 1.00 47.19 P
ATOM 25 OP1 A A 9 18.768 -7.440 -78.023 1.00 38.58 O
ATOM 26 OP2 A A 9 21.221 -7.206 -78.755 1.00 50.00 O
ATOM 27 O5' A A 9 20.504 -6.559 -76.424 1.00 51.26 O
TER
ATOM 1 O3' A B 9 20.923 -4.757 -73.305 1.00 51.51 O
ATOM 2 P C B 10 19.669 -5.509 -72.637 1.00 44.85 P
ATOM 3 OP1 C B 10 18.693 -5.780 -73.722 1.00 47.55 O
ATOM 4 OP2 C B 10 19.237 -4.689 -71.480 1.00 39.37 O
ATOM 5 O5' C B 10 20.309 -6.878 -72.125 1.00 47.42 O
ATOM 6 C5' C B 10 20.118 -8.087 -72.847 1.00 48.13 C
ATOM 7 C4' C B 10 21.165 -9.118 -72.504 1.00 47.08 C
ATOM 8 O4' C B 10 22.465 -8.688 -72.987 1.00 49.44 O
ATOM 9 C3' C B 10 21.398 -9.373 -71.024 1.00 46.39 C
ATOM 10 O3' C B 10 20.419 -10.213 -70.439 1.00 53.05 O
ATOM 11 C2' C B 10 22.799 -9.964 -71.013 1.00 43.45 C
ATOM 12 O2' C B 10 22.775 -11.322 -71.428 1.00 40.30 O
ATOM 13 C1' C B 10 23.475 -9.142 -72.107 1.00 42.81 C
ATOM 14 N1 C B 10 24.187 -7.973 -71.554 1.00 40.24 N
ATOM 15 C2 C B 10 25.489 -8.175 -71.098 1.00 41.60 C
ATOM 16 O2 C B 10 25.975 -9.312 -71.181 1.00 43.40 O
ATOM 17 N3 C B 10 26.178 -7.135 -70.581 1.00 38.49 N
ATOM 18 C4 C B 10 25.609 -5.932 -70.514 1.00 35.99 C
ATOM 19 N4 C B 10 26.336 -4.938 -69.996 1.00 36.86 N
ATOM 20 C5 C B 10 24.278 -5.696 -70.973 1.00 35.59 C
ATOM 21 C6 C B 10 23.608 -6.738 -71.480 1.00 39.08 C
ATOM 22 P U B 11 20.117 -10.115 -68.863 1.00 52.15 P
ATOM 23 OP1 U B 11 18.991 -11.033 -68.574 1.00 47.28 O
ATOM 24 OP2 U B 11 19.966 -8.676 -68.538 1.00 52.70 O
ATOM 25 O5' U B 11 21.454 -10.678 -68.211 1.00 39.76 O
TER
Atoms:
OP1: (25.532,-10.075,-81.938)
OP2: (23.888,-8.121,-82.032)
C3': (21.849,-9.426,-76.957)
C1': (23.242,-11.257,-76.349)
C5': (22.937,-9.185,-79.264)
O4': (23.453,-10.959,-77.711)
C8: (25.408,-11.767,-75.129)
O2': (20.892,-11.386,-75.902)
C6: (26.752,-8.711,-74.054)
C5: (26.086,-9.845,-74.550)
C4: (24.894,-9.639,-75.226)
P: (24.653,-9.110,-81.232)
C4': (22.393,-10.108,-78.204)
C2': (21.998,-10.496,-75.880)
C2: (25.025,-7.459,-74.941)
N1: (26.183,-7.507,-74.271)
N3: (24.303,-8.453,-75.456)
N6: (27.907,-8.763,-73.387)
N7: (26.400,-11.194,-74.497)
N9: (24.455,-10.891,-75.591)
O5': (23.671,-9.888,-80.253)
O3': (20.517,-8.964,-77.114)
OP2: (23.888,-8.121,-82.032)
C3': (21.849,-9.426,-76.957)
C1': (23.242,-11.257,-76.349)
C5': (22.937,-9.185,-79.264)
O4': (23.453,-10.959,-77.711)
C8: (25.408,-11.767,-75.129)
O2': (20.892,-11.386,-75.902)
C6: (26.752,-8.711,-74.054)
C5: (26.086,-9.845,-74.550)
C4: (24.894,-9.639,-75.226)
P: (24.653,-9.110,-81.232)
C4': (22.393,-10.108,-78.204)
C2': (21.998,-10.496,-75.880)
C2: (25.025,-7.459,-74.941)
N1: (26.183,-7.507,-74.271)
N3: (24.303,-8.453,-75.456)
N6: (27.907,-8.763,-73.387)
N7: (26.400,-11.194,-74.497)
N9: (24.455,-10.891,-75.591)
O5': (23.671,-9.888,-80.253)
O3': (20.517,-8.964,-77.114)
C2: (25.489,-8.175,-71.098)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
OP1: (18.693,-5.780,-73.722)
OP2: (19.237,-4.689,-71.480)
C4: (25.609,-5.932,-70.514)
O5': (20.309,-6.878,-72.125)
C3': (21.398,-9.373,-71.024)
C1': (23.475,-9.142,-72.107)
O4': (22.465,-8.688,-72.987)
C5': (20.118,-8.087,-72.847)
P: (19.669,-5.509,-72.637)
O2: (25.975,-9.312,-71.181)
C4': (21.165,-9.118,-72.504)
C2': (22.799,-9.964,-71.013)
O2': (22.775,-11.322,-71.428)
N1: (24.187,-7.973,-71.554)
N3: (26.178,-7.135,-70.581)
N4: (26.336,-4.938,-69.996)
C6: (23.608,-6.738,-71.480)
C5: (24.278,-5.696,-70.973)
O3': (20.419,-10.213,-70.439)
Image (generated by PyMOL):