Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2Y9H:J11:J6
Extra
PDB:
ATOM 1 O3' U A 10 14.666 -46.045 27.320 1.00 50.25 O
ATOM 2 P G A 11 13.624 -45.208 28.168 1.00 55.80 P
ATOM 3 OP1 G A 11 12.331 -45.293 27.465 1.00 50.03 O
ATOM 4 OP2 G A 11 13.721 -45.702 29.562 1.00 61.76 O
ATOM 5 O5' G A 11 14.212 -43.711 28.072 1.00 58.53 O
ATOM 6 C5' G A 11 13.736 -42.652 28.915 1.00 48.39 C
ATOM 7 C4' G A 11 14.826 -41.635 29.196 1.00 37.31 C
ATOM 8 O4' G A 11 15.015 -40.739 28.063 1.00 32.27 O
ATOM 9 C3' G A 11 14.594 -40.642 30.324 1.00 30.46 C
ATOM 10 O3' G A 11 14.629 -41.210 31.619 1.00 30.54 O
ATOM 11 C2' G A 11 15.713 -39.639 30.064 1.00 33.82 C
ATOM 12 O2' G A 11 16.963 -40.156 30.488 1.00 37.62 O
ATOM 13 C1' G A 11 15.722 -39.589 28.534 1.00 43.43 C
ATOM 14 N9 G A 11 15.119 -38.332 28.026 1.00 36.69 N
ATOM 15 C8 G A 11 15.665 -37.079 28.277 1.00 35.36 C
ATOM 16 N7 G A 11 15.030 -36.056 27.798 1.00 23.15 N
ATOM 17 C5 G A 11 13.970 -36.712 27.192 1.00 26.20 C
ATOM 18 C6 G A 11 12.918 -36.147 26.490 1.00 28.49 C
ATOM 19 O6 G A 11 12.749 -34.963 26.282 1.00 34.94 O
ATOM 20 N1 G A 11 12.045 -37.114 26.019 1.00 50.93 N
ATOM 21 C2 G A 11 12.171 -38.483 26.210 1.00 52.44 C
ATOM 22 N2 G A 11 11.215 -39.263 25.664 1.00 59.05 N
ATOM 23 N3 G A 11 13.157 -39.042 26.891 1.00 22.33 N
ATOM 24 C4 G A 11 14.000 -38.094 27.315 1.00 20.12 C
ATOM 25 P U A 12 13.815 -40.516 32.823 1.00 32.17 P
ATOM 26 OP1 U A 12 14.095 -41.298 34.046 1.00 43.29 O
ATOM 27 OP2 U A 12 12.416 -40.371 32.386 1.00 28.07 O
ATOM 28 O5' U A 12 14.480 -39.078 32.931 1.00 25.15 O
TER
ATOM 1 O3' A B 5 14.070 -25.190 24.941 1.00 29.17 O
ATOM 2 P C B 6 14.553 -25.907 23.580 1.00 55.41 P
ATOM 3 OP1 C B 6 15.205 -24.872 22.745 1.00 58.11 O
ATOM 4 OP2 C B 6 13.377 -26.635 23.030 1.00 48.24 O
ATOM 5 O5' C B 6 15.645 -26.944 24.091 1.00 40.25 O
ATOM 6 C5' C B 6 16.605 -26.550 25.043 1.00 39.89 C
ATOM 7 C4' C B 6 17.157 -27.726 25.782 1.00 44.73 C
ATOM 8 O4' C B 6 16.168 -28.259 26.704 1.00 42.12 O
ATOM 9 C3' C B 6 17.544 -28.926 24.940 1.00 41.75 C
ATOM 10 O3' C B 6 18.760 -28.731 24.241 1.00 37.71 O
ATOM 11 C2' C B 6 17.614 -30.014 26.000 1.00 45.08 C
ATOM 12 O2' C B 6 18.792 -29.864 26.773 1.00 43.13 O
ATOM 13 C1' C B 6 16.403 -29.647 26.879 1.00 39.08 C
ATOM 14 N1 C B 6 15.196 -30.380 26.459 1.00 39.14 N
ATOM 15 C2 C B 6 14.962 -31.687 26.920 1.00 45.26 C
ATOM 16 O2 C B 6 15.747 -32.225 27.727 1.00 45.37 O
ATOM 17 N3 C B 6 13.861 -32.336 26.464 1.00 35.55 N
ATOM 18 C4 C B 6 13.032 -31.741 25.599 1.00 27.86 C
ATOM 19 N4 C B 6 11.965 -32.418 25.190 1.00 26.43 N
ATOM 20 C5 C B 6 13.247 -30.427 25.111 1.00 22.88 C
ATOM 21 C6 C B 6 14.336 -29.797 25.564 1.00 30.64 C
ATOM 22 P G B 7 19.162 -29.675 23.003 1.00 40.16 P
ATOM 23 OP1 G B 7 20.556 -29.348 22.655 1.00 38.26 O
ATOM 24 OP2 G B 7 18.121 -29.526 21.964 1.00 44.84 O
ATOM 25 O5' G B 7 19.092 -31.132 23.632 1.00 55.68 O
TER
ATOM 2 P G A 11 13.624 -45.208 28.168 1.00 55.80 P
ATOM 3 OP1 G A 11 12.331 -45.293 27.465 1.00 50.03 O
ATOM 4 OP2 G A 11 13.721 -45.702 29.562 1.00 61.76 O
ATOM 5 O5' G A 11 14.212 -43.711 28.072 1.00 58.53 O
ATOM 6 C5' G A 11 13.736 -42.652 28.915 1.00 48.39 C
ATOM 7 C4' G A 11 14.826 -41.635 29.196 1.00 37.31 C
ATOM 8 O4' G A 11 15.015 -40.739 28.063 1.00 32.27 O
ATOM 9 C3' G A 11 14.594 -40.642 30.324 1.00 30.46 C
ATOM 10 O3' G A 11 14.629 -41.210 31.619 1.00 30.54 O
ATOM 11 C2' G A 11 15.713 -39.639 30.064 1.00 33.82 C
ATOM 12 O2' G A 11 16.963 -40.156 30.488 1.00 37.62 O
ATOM 13 C1' G A 11 15.722 -39.589 28.534 1.00 43.43 C
ATOM 14 N9 G A 11 15.119 -38.332 28.026 1.00 36.69 N
ATOM 15 C8 G A 11 15.665 -37.079 28.277 1.00 35.36 C
ATOM 16 N7 G A 11 15.030 -36.056 27.798 1.00 23.15 N
ATOM 17 C5 G A 11 13.970 -36.712 27.192 1.00 26.20 C
ATOM 18 C6 G A 11 12.918 -36.147 26.490 1.00 28.49 C
ATOM 19 O6 G A 11 12.749 -34.963 26.282 1.00 34.94 O
ATOM 20 N1 G A 11 12.045 -37.114 26.019 1.00 50.93 N
ATOM 21 C2 G A 11 12.171 -38.483 26.210 1.00 52.44 C
ATOM 22 N2 G A 11 11.215 -39.263 25.664 1.00 59.05 N
ATOM 23 N3 G A 11 13.157 -39.042 26.891 1.00 22.33 N
ATOM 24 C4 G A 11 14.000 -38.094 27.315 1.00 20.12 C
ATOM 25 P U A 12 13.815 -40.516 32.823 1.00 32.17 P
ATOM 26 OP1 U A 12 14.095 -41.298 34.046 1.00 43.29 O
ATOM 27 OP2 U A 12 12.416 -40.371 32.386 1.00 28.07 O
ATOM 28 O5' U A 12 14.480 -39.078 32.931 1.00 25.15 O
TER
ATOM 1 O3' A B 5 14.070 -25.190 24.941 1.00 29.17 O
ATOM 2 P C B 6 14.553 -25.907 23.580 1.00 55.41 P
ATOM 3 OP1 C B 6 15.205 -24.872 22.745 1.00 58.11 O
ATOM 4 OP2 C B 6 13.377 -26.635 23.030 1.00 48.24 O
ATOM 5 O5' C B 6 15.645 -26.944 24.091 1.00 40.25 O
ATOM 6 C5' C B 6 16.605 -26.550 25.043 1.00 39.89 C
ATOM 7 C4' C B 6 17.157 -27.726 25.782 1.00 44.73 C
ATOM 8 O4' C B 6 16.168 -28.259 26.704 1.00 42.12 O
ATOM 9 C3' C B 6 17.544 -28.926 24.940 1.00 41.75 C
ATOM 10 O3' C B 6 18.760 -28.731 24.241 1.00 37.71 O
ATOM 11 C2' C B 6 17.614 -30.014 26.000 1.00 45.08 C
ATOM 12 O2' C B 6 18.792 -29.864 26.773 1.00 43.13 O
ATOM 13 C1' C B 6 16.403 -29.647 26.879 1.00 39.08 C
ATOM 14 N1 C B 6 15.196 -30.380 26.459 1.00 39.14 N
ATOM 15 C2 C B 6 14.962 -31.687 26.920 1.00 45.26 C
ATOM 16 O2 C B 6 15.747 -32.225 27.727 1.00 45.37 O
ATOM 17 N3 C B 6 13.861 -32.336 26.464 1.00 35.55 N
ATOM 18 C4 C B 6 13.032 -31.741 25.599 1.00 27.86 C
ATOM 19 N4 C B 6 11.965 -32.418 25.190 1.00 26.43 N
ATOM 20 C5 C B 6 13.247 -30.427 25.111 1.00 22.88 C
ATOM 21 C6 C B 6 14.336 -29.797 25.564 1.00 30.64 C
ATOM 22 P G B 7 19.162 -29.675 23.003 1.00 40.16 P
ATOM 23 OP1 G B 7 20.556 -29.348 22.655 1.00 38.26 O
ATOM 24 OP2 G B 7 18.121 -29.526 21.964 1.00 44.84 O
ATOM 25 O5' G B 7 19.092 -31.132 23.632 1.00 55.68 O
TER
Atoms:
OP1: (12.331,-45.293,27.465)
OP2: (13.721,-45.702,29.562)
C3': (14.594,-40.642,30.324)
C1': (15.722,-39.589,28.534)
C5': (13.736,-42.652,28.915)
O6: (12.749,-34.963,26.282)
O4': (15.015,-40.739,28.063)
C8: (15.665,-37.079,28.277)
C2: (12.171,-38.483,26.210)
C6: (12.918,-36.147,26.490)
C5: (13.970,-36.712,27.192)
C4: (14.000,-38.094,27.315)
P: (13.624,-45.208,28.168)
C4': (14.826,-41.635,29.196)
C2': (15.713,-39.639,30.064)
O2': (16.963,-40.156,30.488)
N1: (12.045,-37.114,26.019)
N2: (11.215,-39.263,25.664)
N3: (13.157,-39.042,26.891)
N7: (15.030,-36.056,27.798)
N9: (15.119,-38.332,28.026)
O5': (14.212,-43.711,28.072)
O3': (14.629,-41.210,31.619)
OP2: (13.721,-45.702,29.562)
C3': (14.594,-40.642,30.324)
C1': (15.722,-39.589,28.534)
C5': (13.736,-42.652,28.915)
O6: (12.749,-34.963,26.282)
O4': (15.015,-40.739,28.063)
C8: (15.665,-37.079,28.277)
C2: (12.171,-38.483,26.210)
C6: (12.918,-36.147,26.490)
C5: (13.970,-36.712,27.192)
C4: (14.000,-38.094,27.315)
P: (13.624,-45.208,28.168)
C4': (14.826,-41.635,29.196)
C2': (15.713,-39.639,30.064)
O2': (16.963,-40.156,30.488)
N1: (12.045,-37.114,26.019)
N2: (11.215,-39.263,25.664)
N3: (13.157,-39.042,26.891)
N7: (15.030,-36.056,27.798)
N9: (15.119,-38.332,28.026)
O5': (14.212,-43.711,28.072)
O3': (14.629,-41.210,31.619)
C2: (14.962,-31.687,26.920)
OP1: (15.205,-24.872,22.745)
OP2: (13.377,-26.635,23.030)
C4: (13.032,-31.741,25.599)
O5': (15.645,-26.944,24.091)
C3': (17.544,-28.926,24.940)
C1': (16.403,-29.647,26.879)
O4': (16.168,-28.259,26.704)
C5': (16.605,-26.550,25.043)
P: (14.553,-25.907,23.580)
O2: (15.747,-32.225,27.727)
C4': (17.157,-27.726,25.782)
C2': (17.614,-30.014,26.000)
O2': (18.792,-29.864,26.773)
N1: (15.196,-30.380,26.459)
N3: (13.861,-32.336,26.464)
N4: (11.965,-32.418,25.190)
C6: (14.336,-29.797,25.564)
C5: (13.247,-30.427,25.111)
O3': (18.760,-28.731,24.241)
OP1: (15.205,-24.872,22.745)
OP2: (13.377,-26.635,23.030)
C4: (13.032,-31.741,25.599)
O5': (15.645,-26.944,24.091)
C3': (17.544,-28.926,24.940)
C1': (16.403,-29.647,26.879)
O4': (16.168,-28.259,26.704)
C5': (16.605,-26.550,25.043)
P: (14.553,-25.907,23.580)
O2: (15.747,-32.225,27.727)
C4': (17.157,-27.726,25.782)
C2': (17.614,-30.014,26.000)
O2': (18.792,-29.864,26.773)
N1: (15.196,-30.380,26.459)
N3: (13.861,-32.336,26.464)
N4: (11.965,-32.418,25.190)
C6: (14.336,-29.797,25.564)
C5: (13.247,-30.427,25.111)
O3': (18.760,-28.731,24.241)
Image (generated by PyMOL):