Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1136:A998
Extra
PDB:
ATOM 1 O3' A A1135 -104.637-101.126 -25.192 1.00 0.01 O
ATOM 2 P A A1136 -104.154-102.583 -24.749 1.00 0.01 P
ATOM 3 OP1 A A1136 -103.394-103.164 -25.890 1.00 0.01 O
ATOM 4 OP2 A A1136 -105.329-103.309 -24.240 1.00 0.01 O
ATOM 5 O5' A A1136 -103.194-102.236 -23.541 1.00 0.01 O
ATOM 6 C5' A A1136 -103.724-101.653 -22.360 1.00 0.01 C
ATOM 7 C4' A A1136 -102.966-100.429 -21.942 1.00 0.01 C
ATOM 8 O4' A A1136 -101.547-100.706 -22.043 1.00 0.01 O
ATOM 9 C3' A A1136 -103.218 -99.209 -22.798 1.00 0.01 C
ATOM 10 O3' A A1136 -103.079 -98.016 -21.998 1.00 0.01 O
ATOM 11 C2' A A1136 -102.088 -99.316 -23.815 1.00 0.01 C
ATOM 12 O2' A A1136 -101.768 -98.122 -24.463 1.00 0.01 O
ATOM 13 C1' A A1136 -100.954 -99.797 -22.931 1.00 0.01 C
ATOM 14 N9 A A1136 -99.863-100.481 -23.638 1.00 0.01 N
ATOM 15 C8 A A1136 -99.856-101.754 -24.085 1.00 0.01 C
ATOM 16 N7 A A1136 -98.751-102.134 -24.652 1.00 0.01 N
ATOM 17 C5 A A1136 -97.948-101.049 -24.572 1.00 0.01 C
ATOM 18 C6 A A1136 -96.649-100.845 -25.023 1.00 0.01 C
ATOM 19 N6 A A1136 -95.925-101.760 -25.652 1.00 0.01 N
ATOM 20 N1 A A1136 -96.097 -99.647 -24.799 1.00 0.01 N
ATOM 21 C2 A A1136 -96.836 -98.726 -24.168 1.00 0.01 C
ATOM 22 N3 A A1136 -98.081 -98.808 -23.700 1.00 0.01 N
ATOM 23 C4 A A1136 -98.602-100.022 -23.941 1.00 0.01 C
ATOM 24 P A A1137 -104.319 -97.441 -21.111 1.00 0.01 P
ATOM 25 OP1 A A1137 -103.786 -97.090 -19.786 1.00 0.01 O
ATOM 26 OP2 A A1137 -105.407 -98.421 -21.178 1.00 0.01 O
ATOM 27 O5' A A1137 -104.746 -96.122 -21.889 1.00 0.01 O
TER
ATOM 1 O3' U B 997 -100.161-104.074 -16.734 1.00 0.01 O
ATOM 2 P C B 998 -100.792-104.764 -18.037 1.00 0.01 P
ATOM 3 OP1 C B 998 -101.887-103.865 -18.520 1.00 0.01 O
ATOM 4 OP2 C B 998 -101.130-106.178 -17.665 1.00 0.01 O
ATOM 5 O5' C B 998 -99.594-104.765 -19.066 1.00 0.01 O
ATOM 6 C5' C B 998 -99.389-105.892 -19.870 1.00 0.01 C
ATOM 7 C4' C B 998 -98.325-105.645 -20.872 1.00 0.01 C
ATOM 8 O4' C B 998 -98.628-104.456 -21.613 1.00 0.01 O
ATOM 9 C3' C B 998 -96.961-105.385 -20.318 1.00 0.01 C
ATOM 10 O3' C B 998 -96.308-106.571 -19.963 1.00 0.01 O
ATOM 11 C2' C B 998 -96.296-104.666 -21.458 1.00 0.01 C
ATOM 12 O2' C B 998 -95.916-105.598 -22.442 1.00 0.01 O
ATOM 13 C1' C B 998 -97.448-103.838 -22.009 1.00 0.01 C
ATOM 14 N1 C B 998 -97.470-102.482 -21.496 1.00 0.01 N
ATOM 15 C2 C B 998 -96.415-101.653 -21.711 1.00 0.01 C
ATOM 16 O2 C B 998 -95.481-102.149 -22.311 1.00 0.01 O
ATOM 17 N3 C B 998 -96.433-100.394 -21.254 1.00 0.01 N
ATOM 18 C4 C B 998 -97.493 -99.969 -20.628 1.00 0.01 C
ATOM 19 N4 C B 998 -97.488 -98.744 -20.205 1.00 0.01 N
ATOM 20 C5 C B 998 -98.621-100.766 -20.394 1.00 0.01 C
ATOM 21 C6 C B 998 -98.570-102.020 -20.852 1.00 0.01 C
ATOM 22 P C B 999 -95.326-106.580 -18.725 1.00 0.01 P
ATOM 23 OP1 C B 999 -94.987-107.970 -18.449 1.00 0.01 O
ATOM 24 OP2 C B 999 -95.948-105.765 -17.663 1.00 0.01 O
ATOM 25 O5' C B 999 -94.080-105.856 -19.295 1.00 0.01 O
TER
ATOM 2 P A A1136 -104.154-102.583 -24.749 1.00 0.01 P
ATOM 3 OP1 A A1136 -103.394-103.164 -25.890 1.00 0.01 O
ATOM 4 OP2 A A1136 -105.329-103.309 -24.240 1.00 0.01 O
ATOM 5 O5' A A1136 -103.194-102.236 -23.541 1.00 0.01 O
ATOM 6 C5' A A1136 -103.724-101.653 -22.360 1.00 0.01 C
ATOM 7 C4' A A1136 -102.966-100.429 -21.942 1.00 0.01 C
ATOM 8 O4' A A1136 -101.547-100.706 -22.043 1.00 0.01 O
ATOM 9 C3' A A1136 -103.218 -99.209 -22.798 1.00 0.01 C
ATOM 10 O3' A A1136 -103.079 -98.016 -21.998 1.00 0.01 O
ATOM 11 C2' A A1136 -102.088 -99.316 -23.815 1.00 0.01 C
ATOM 12 O2' A A1136 -101.768 -98.122 -24.463 1.00 0.01 O
ATOM 13 C1' A A1136 -100.954 -99.797 -22.931 1.00 0.01 C
ATOM 14 N9 A A1136 -99.863-100.481 -23.638 1.00 0.01 N
ATOM 15 C8 A A1136 -99.856-101.754 -24.085 1.00 0.01 C
ATOM 16 N7 A A1136 -98.751-102.134 -24.652 1.00 0.01 N
ATOM 17 C5 A A1136 -97.948-101.049 -24.572 1.00 0.01 C
ATOM 18 C6 A A1136 -96.649-100.845 -25.023 1.00 0.01 C
ATOM 19 N6 A A1136 -95.925-101.760 -25.652 1.00 0.01 N
ATOM 20 N1 A A1136 -96.097 -99.647 -24.799 1.00 0.01 N
ATOM 21 C2 A A1136 -96.836 -98.726 -24.168 1.00 0.01 C
ATOM 22 N3 A A1136 -98.081 -98.808 -23.700 1.00 0.01 N
ATOM 23 C4 A A1136 -98.602-100.022 -23.941 1.00 0.01 C
ATOM 24 P A A1137 -104.319 -97.441 -21.111 1.00 0.01 P
ATOM 25 OP1 A A1137 -103.786 -97.090 -19.786 1.00 0.01 O
ATOM 26 OP2 A A1137 -105.407 -98.421 -21.178 1.00 0.01 O
ATOM 27 O5' A A1137 -104.746 -96.122 -21.889 1.00 0.01 O
TER
ATOM 1 O3' U B 997 -100.161-104.074 -16.734 1.00 0.01 O
ATOM 2 P C B 998 -100.792-104.764 -18.037 1.00 0.01 P
ATOM 3 OP1 C B 998 -101.887-103.865 -18.520 1.00 0.01 O
ATOM 4 OP2 C B 998 -101.130-106.178 -17.665 1.00 0.01 O
ATOM 5 O5' C B 998 -99.594-104.765 -19.066 1.00 0.01 O
ATOM 6 C5' C B 998 -99.389-105.892 -19.870 1.00 0.01 C
ATOM 7 C4' C B 998 -98.325-105.645 -20.872 1.00 0.01 C
ATOM 8 O4' C B 998 -98.628-104.456 -21.613 1.00 0.01 O
ATOM 9 C3' C B 998 -96.961-105.385 -20.318 1.00 0.01 C
ATOM 10 O3' C B 998 -96.308-106.571 -19.963 1.00 0.01 O
ATOM 11 C2' C B 998 -96.296-104.666 -21.458 1.00 0.01 C
ATOM 12 O2' C B 998 -95.916-105.598 -22.442 1.00 0.01 O
ATOM 13 C1' C B 998 -97.448-103.838 -22.009 1.00 0.01 C
ATOM 14 N1 C B 998 -97.470-102.482 -21.496 1.00 0.01 N
ATOM 15 C2 C B 998 -96.415-101.653 -21.711 1.00 0.01 C
ATOM 16 O2 C B 998 -95.481-102.149 -22.311 1.00 0.01 O
ATOM 17 N3 C B 998 -96.433-100.394 -21.254 1.00 0.01 N
ATOM 18 C4 C B 998 -97.493 -99.969 -20.628 1.00 0.01 C
ATOM 19 N4 C B 998 -97.488 -98.744 -20.205 1.00 0.01 N
ATOM 20 C5 C B 998 -98.621-100.766 -20.394 1.00 0.01 C
ATOM 21 C6 C B 998 -98.570-102.020 -20.852 1.00 0.01 C
ATOM 22 P C B 999 -95.326-106.580 -18.725 1.00 0.01 P
ATOM 23 OP1 C B 999 -94.987-107.970 -18.449 1.00 0.01 O
ATOM 24 OP2 C B 999 -95.948-105.765 -17.663 1.00 0.01 O
ATOM 25 O5' C B 999 -94.080-105.856 -19.295 1.00 0.01 O
TER
Atoms:
OP1: (-103.394,-103.164,-25.890)
OP2: (-105.329,-103.309,-24.240)
C3': (-103.218,-99.209,-22.798)
C1': (-100.954,-99.797,-22.931)
C5': (-103.724,-101.653,-22.360)
O4': (-101.547,-100.706,-22.043)
C8: (-99.856,-101.754,-24.085)
O2': (-101.768,-98.122,-24.463)
C6: (-96.649,-100.845,-25.023)
C5: (-97.948,-101.049,-24.572)
C4: (-98.602,-100.022,-23.941)
P: (-104.154,-102.583,-24.749)
C4': (-102.966,-100.429,-21.942)
C2': (-102.088,-99.316,-23.815)
C2: (-96.836,-98.726,-24.168)
N1: (-96.097,-99.647,-24.799)
N3: (-98.081,-98.808,-23.700)
N6: (-95.925,-101.760,-25.652)
N7: (-98.751,-102.134,-24.652)
N9: (-99.863,-100.481,-23.638)
O5': (-103.194,-102.236,-23.541)
O3': (-103.079,-98.016,-21.998)
OP2: (-105.329,-103.309,-24.240)
C3': (-103.218,-99.209,-22.798)
C1': (-100.954,-99.797,-22.931)
C5': (-103.724,-101.653,-22.360)
O4': (-101.547,-100.706,-22.043)
C8: (-99.856,-101.754,-24.085)
O2': (-101.768,-98.122,-24.463)
C6: (-96.649,-100.845,-25.023)
C5: (-97.948,-101.049,-24.572)
C4: (-98.602,-100.022,-23.941)
P: (-104.154,-102.583,-24.749)
C4': (-102.966,-100.429,-21.942)
C2': (-102.088,-99.316,-23.815)
C2: (-96.836,-98.726,-24.168)
N1: (-96.097,-99.647,-24.799)
N3: (-98.081,-98.808,-23.700)
N6: (-95.925,-101.760,-25.652)
N7: (-98.751,-102.134,-24.652)
N9: (-99.863,-100.481,-23.638)
O5': (-103.194,-102.236,-23.541)
O3': (-103.079,-98.016,-21.998)
C2: (-96.415,-101.653,-21.711)
OP1: (-101.887,-103.865,-18.520)
OP2: (-101.130,-106.178,-17.665)
C4: (-97.493,-99.969,-20.628)
O5': (-99.594,-104.765,-19.066)
C3': (-96.961,-105.385,-20.318)
C1': (-97.448,-103.838,-22.009)
O4': (-98.628,-104.456,-21.613)
C5': (-99.389,-105.892,-19.870)
P: (-100.792,-104.764,-18.037)
O2: (-95.481,-102.149,-22.311)
C4': (-98.325,-105.645,-20.872)
C2': (-96.296,-104.666,-21.458)
O2': (-95.916,-105.598,-22.442)
N1: (-97.470,-102.482,-21.496)
N3: (-96.433,-100.394,-21.254)
N4: (-97.488,-98.744,-20.205)
C6: (-98.570,-102.020,-20.852)
C5: (-98.621,-100.766,-20.394)
O3': (-96.308,-106.571,-19.963)
OP1: (-101.887,-103.865,-18.520)
OP2: (-101.130,-106.178,-17.665)
C4: (-97.493,-99.969,-20.628)
O5': (-99.594,-104.765,-19.066)
C3': (-96.961,-105.385,-20.318)
C1': (-97.448,-103.838,-22.009)
O4': (-98.628,-104.456,-21.613)
C5': (-99.389,-105.892,-19.870)
P: (-100.792,-104.764,-18.037)
O2: (-95.481,-102.149,-22.311)
C4': (-98.325,-105.645,-20.872)
C2': (-96.296,-104.666,-21.458)
O2': (-95.916,-105.598,-22.442)
N1: (-97.470,-102.482,-21.496)
N3: (-96.433,-100.394,-21.254)
N4: (-97.488,-98.744,-20.205)
C6: (-98.570,-102.020,-20.852)
C5: (-98.621,-100.766,-20.394)
O3': (-96.308,-106.571,-19.963)
Image (generated by PyMOL):