ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DJ0:A168:A167

Extra

PDB:
ATOM 1 O3' G A 167 37.193 -3.709 26.546 1.00 27.58 O
ATOM 2 P U A 168 37.029 -5.242 26.154 1.00 27.12 P
ATOM 3 OP1 U A 168 38.010 -6.012 26.965 1.00 26.04 O
ATOM 4 OP2 U A 168 36.984 -5.341 24.673 1.00 25.50 O
ATOM 5 O5' U A 168 35.576 -5.561 26.724 1.00 27.59 O
ATOM 6 C5' U A 168 35.354 -5.505 28.121 1.00 28.25 C
ATOM 7 C4' U A 168 33.895 -5.760 28.395 1.00 28.23 C
ATOM 8 O4' U A 168 33.108 -4.663 27.878 1.00 27.97 O
ATOM 9 C3' U A 168 33.340 -6.964 27.661 1.00 28.04 C
ATOM 10 O3' U A 168 33.682 -8.155 28.346 1.00 27.86 O
ATOM 11 C2' U A 168 31.856 -6.662 27.743 1.00 28.08 C
ATOM 12 O2' U A 168 31.335 -6.952 29.023 1.00 27.91 O
ATOM 13 C1' U A 168 31.840 -5.161 27.478 1.00 28.47 C
ATOM 14 N1 U A 168 31.546 -4.828 26.034 1.00 28.74 N
ATOM 15 C2 U A 168 30.226 -4.761 25.619 1.00 29.46 C
ATOM 16 O2 U A 168 29.284 -4.956 26.371 1.00 30.85 O
ATOM 17 N3 U A 168 30.040 -4.456 24.288 1.00 29.13 N
ATOM 18 C4 U A 168 31.034 -4.223 23.346 1.00 29.07 C
ATOM 19 O4 U A 168 30.736 -3.965 22.187 1.00 28.53 O
ATOM 20 C5 U A 168 32.382 -4.313 23.849 1.00 29.20 C
ATOM 21 C6 U A 168 32.582 -4.604 25.142 1.00 28.68 C
ATOM 22 P C A 169 33.861 -9.489 27.495 1.00 27.88 P
ATOM 23 OP1 C A 169 34.613 -10.450 28.321 1.00 27.61 O
ATOM 24 OP2 C A 169 34.365 -9.136 26.144 1.00 28.53 O
ATOM 25 O5' C A 169 32.345 -9.988 27.349 1.00 28.26 O
TER

ATOM 1 O3' C B 166 39.780 0.852 22.855 1.00 30.67 O
ATOM 2 P G B 167 39.587 -0.720 22.623 1.00 31.75 P
ATOM 3 OP1 G B 167 40.847 -1.360 23.059 1.00 31.64 O
ATOM 4 OP2 G B 167 39.035 -0.947 21.261 1.00 32.49 O
ATOM 5 O5' G B 167 38.389 -1.109 23.606 1.00 31.71 O
ATOM 6 C5' G B 167 38.671 -1.497 24.930 1.00 29.80 C
ATOM 7 C4' G B 167 37.422 -1.473 25.782 1.00 28.44 C
ATOM 8 O4' G B 167 36.493 -0.465 25.350 1.00 28.06 O
ATOM 9 C3' G B 167 36.557 -2.715 25.783 1.00 27.60 C
ATOM 10 O3' G B 167 37.193 -3.709 26.546 1.00 27.58 O
ATOM 11 C2' G B 167 35.357 -2.161 26.533 1.00 27.49 C
ATOM 12 O2' G B 167 35.589 -1.981 27.922 1.00 25.97 O
ATOM 13 C1' G B 167 35.220 -0.801 25.872 1.00 27.71 C
ATOM 14 N9 G B 167 34.220 -0.751 24.806 1.00 27.76 N
ATOM 15 C8 G B 167 34.450 -0.479 23.482 1.00 26.69 C
ATOM 16 N7 G B 167 33.370 -0.495 22.763 1.00 26.94 N
ATOM 17 C5 G B 167 32.355 -0.786 23.658 1.00 27.37 C
ATOM 18 C6 G B 167 30.964 -0.925 23.441 1.00 27.67 C
ATOM 19 O6 G B 167 30.360 -0.807 22.365 1.00 28.12 O
ATOM 20 N1 G B 167 30.270 -1.226 24.617 1.00 27.25 N
ATOM 21 C2 G B 167 30.873 -1.371 25.851 1.00 28.51 C
ATOM 22 N2 G B 167 30.080 -1.663 26.894 1.00 27.67 N
ATOM 23 N3 G B 167 32.180 -1.231 26.062 1.00 28.13 N
ATOM 24 C4 G B 167 32.861 -0.943 24.925 1.00 27.58 C
ATOM 25 P U B 168 37.029 -5.242 26.154 1.00 27.12 P
ATOM 26 OP1 U B 168 38.010 -6.012 26.965 1.00 26.04 O
ATOM 27 OP2 U B 168 36.984 -5.341 24.673 1.00 25.50 O
ATOM 28 O5' U B 168 35.576 -5.561 26.724 1.00 27.59 O
TER

Atoms:
C4: (31.034,-4.223,23.346)
N3: (30.040,-4.456,24.288)
OP1: (38.010,-6.012,26.965)
OP2: (36.984,-5.341,24.673)
C2: (30.226,-4.761,25.619)
C1': (31.840,-5.161,27.478)
C3': (33.340,-6.964,27.661)
O5': (35.576,-5.561,26.724)
O4': (33.108,-4.663,27.878)
C5': (35.354,-5.505,28.121)
P: (37.029,-5.242,26.154)
C4': (33.895,-5.760,28.395)
C2': (31.856,-6.662,27.743)
O2': (31.335,-6.952,29.023)
N1: (31.546,-4.828,26.034)
O4: (30.736,-3.965,22.187)
O2: (29.284,-4.956,26.371)
C6: (32.582,-4.604,25.142)
C5: (32.382,-4.313,23.849)
O3': (33.682,-8.155,28.346)
OP1: (40.847,-1.360,23.059)
OP2: (39.035,-0.947,21.261)
C3': (36.557,-2.715,25.783)
C1': (35.220,-0.801,25.872)
C5': (38.671,-1.497,24.930)
O6: (30.360,-0.807,22.365)
O4': (36.493,-0.465,25.350)
C8: (34.450,-0.479,23.482)
C2: (30.873,-1.371,25.851)
C6: (30.964,-0.925,23.441)
C5: (32.355,-0.786,23.658)
C4: (32.861,-0.943,24.925)
P: (39.587,-0.720,22.623)
C4': (37.422,-1.473,25.782)
C2': (35.357,-2.161,26.533)
O2': (35.589,-1.981,27.922)
N1: (30.270,-1.226,24.617)
N2: (30.080,-1.663,26.894)
N3: (32.180,-1.231,26.062)
N7: (33.370,-0.495,22.763)
N9: (34.220,-0.751,24.806)
O5': (38.389,-1.109,23.606)
O3': (37.193,-3.709,26.546)
Image (generated by PyMOL):
PyMOL image
show in jmol