Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:4137:4105
Extra
PDB:
ATOM 1 O3' C A 136 45.024 -1.563 145.261 1.00 62.17 O
ATOM 2 P A A 137 45.420 -2.037 143.784 1.00 60.96 P
ATOM 3 OP1 A A 137 45.436 -3.501 143.787 1.00 60.75 O
ATOM 4 OP2 A A 137 46.641 -1.317 143.414 1.00 60.81 O
ATOM 5 O5' A A 137 44.216 -1.518 142.894 1.00 60.48 O
ATOM 6 C5' A A 137 43.015 -2.248 142.809 1.00 60.35 C
ATOM 7 C4' A A 137 42.477 -2.331 141.393 1.00 59.44 C
ATOM 8 O4' A A 137 43.456 -1.886 140.419 1.00 58.84 O
ATOM 9 C3' A A 137 42.120 -3.718 140.937 1.00 58.98 C
ATOM 10 O3' A A 137 40.873 -4.105 141.409 1.00 59.30 O
ATOM 11 C2' A A 137 42.185 -3.620 139.435 1.00 58.04 C
ATOM 12 O2' A A 137 41.020 -2.982 138.940 1.00 57.88 O
ATOM 13 C1' A A 137 43.380 -2.691 139.262 1.00 58.00 C
ATOM 14 N9 A A 137 44.630 -3.456 139.163 1.00 57.80 N
ATOM 15 C8 A A 137 45.668 -3.396 140.050 1.00 58.34 C
ATOM 16 N7 A A 137 46.631 -4.218 139.751 1.00 58.04 N
ATOM 17 C5 A A 137 46.209 -4.864 138.596 1.00 57.26 C
ATOM 18 C6 A A 137 46.783 -5.852 137.786 1.00 56.65 C
ATOM 19 N6 A A 137 47.976 -6.407 137.987 1.00 56.72 N
ATOM 20 N1 A A 137 46.110 -6.271 136.710 1.00 55.98 N
ATOM 21 C2 A A 137 44.908 -5.761 136.505 1.00 55.92 C
ATOM 22 N3 A A 137 44.263 -4.828 137.191 1.00 56.45 N
ATOM 23 C4 A A 137 44.974 -4.411 138.239 1.00 57.11 C
ATOM 24 P U A 138 40.738 -5.442 142.227 1.00 55.16 P
ATOM 25 OP1 U A 138 39.517 -5.298 143.049 1.00 55.80 O
ATOM 26 OP2 U A 138 42.027 -5.677 142.899 1.00 55.49 O
ATOM 27 O5' U A 138 40.529 -6.512 141.074 1.00 54.32 O
TER
ATOM 1 O3' A B 104 46.709 0.898 133.263 1.00 49.92 O
ATOM 2 P C B 105 45.192 1.115 133.750 1.00 50.30 P
ATOM 3 OP1 C B 105 44.286 0.466 132.764 1.00 49.65 O
ATOM 4 OP2 C B 105 45.026 2.590 134.015 1.00 50.70 O
ATOM 5 O5' C B 105 45.178 0.310 135.119 1.00 50.98 O
ATOM 6 C5' C B 105 44.477 0.824 136.242 1.00 51.74 C
ATOM 7 C4' C B 105 45.121 0.422 137.541 1.00 52.46 C
ATOM 8 O4' C B 105 45.425 -1.005 137.502 1.00 52.21 O
ATOM 9 C3' C B 105 46.431 1.121 137.854 1.00 52.75 C
ATOM 10 O3' C B 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 11 C2' C B 105 47.448 0.151 137.308 1.00 52.26 C
ATOM 12 O2' C B 105 48.708 0.273 137.872 1.00 52.64 O
ATOM 13 C1' C B 105 46.815 -1.194 137.650 1.00 52.27 C
ATOM 14 N1 C B 105 47.235 -2.287 136.749 1.00 51.57 N
ATOM 15 C2 C B 105 48.554 -2.743 136.812 1.00 51.56 C
ATOM 16 O2 C B 105 49.342 -2.273 137.620 1.00 52.12 O
ATOM 17 N3 C B 105 48.972 -3.700 135.973 1.00 50.95 N
ATOM 18 C4 C B 105 48.119 -4.209 135.093 1.00 50.36 C
ATOM 19 N4 C B 105 48.579 -5.160 134.301 1.00 49.82 N
ATOM 20 C5 C B 105 46.783 -3.762 135.008 1.00 50.36 C
ATOM 21 C6 C B 105 46.382 -2.807 135.842 1.00 50.96 C
ATOM 22 P G B 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 23 OP1 G B 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 24 OP2 G B 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 25 O5' G B 106 45.087 2.727 140.518 1.00 56.31 O
TER
ATOM 2 P A A 137 45.420 -2.037 143.784 1.00 60.96 P
ATOM 3 OP1 A A 137 45.436 -3.501 143.787 1.00 60.75 O
ATOM 4 OP2 A A 137 46.641 -1.317 143.414 1.00 60.81 O
ATOM 5 O5' A A 137 44.216 -1.518 142.894 1.00 60.48 O
ATOM 6 C5' A A 137 43.015 -2.248 142.809 1.00 60.35 C
ATOM 7 C4' A A 137 42.477 -2.331 141.393 1.00 59.44 C
ATOM 8 O4' A A 137 43.456 -1.886 140.419 1.00 58.84 O
ATOM 9 C3' A A 137 42.120 -3.718 140.937 1.00 58.98 C
ATOM 10 O3' A A 137 40.873 -4.105 141.409 1.00 59.30 O
ATOM 11 C2' A A 137 42.185 -3.620 139.435 1.00 58.04 C
ATOM 12 O2' A A 137 41.020 -2.982 138.940 1.00 57.88 O
ATOM 13 C1' A A 137 43.380 -2.691 139.262 1.00 58.00 C
ATOM 14 N9 A A 137 44.630 -3.456 139.163 1.00 57.80 N
ATOM 15 C8 A A 137 45.668 -3.396 140.050 1.00 58.34 C
ATOM 16 N7 A A 137 46.631 -4.218 139.751 1.00 58.04 N
ATOM 17 C5 A A 137 46.209 -4.864 138.596 1.00 57.26 C
ATOM 18 C6 A A 137 46.783 -5.852 137.786 1.00 56.65 C
ATOM 19 N6 A A 137 47.976 -6.407 137.987 1.00 56.72 N
ATOM 20 N1 A A 137 46.110 -6.271 136.710 1.00 55.98 N
ATOM 21 C2 A A 137 44.908 -5.761 136.505 1.00 55.92 C
ATOM 22 N3 A A 137 44.263 -4.828 137.191 1.00 56.45 N
ATOM 23 C4 A A 137 44.974 -4.411 138.239 1.00 57.11 C
ATOM 24 P U A 138 40.738 -5.442 142.227 1.00 55.16 P
ATOM 25 OP1 U A 138 39.517 -5.298 143.049 1.00 55.80 O
ATOM 26 OP2 U A 138 42.027 -5.677 142.899 1.00 55.49 O
ATOM 27 O5' U A 138 40.529 -6.512 141.074 1.00 54.32 O
TER
ATOM 1 O3' A B 104 46.709 0.898 133.263 1.00 49.92 O
ATOM 2 P C B 105 45.192 1.115 133.750 1.00 50.30 P
ATOM 3 OP1 C B 105 44.286 0.466 132.764 1.00 49.65 O
ATOM 4 OP2 C B 105 45.026 2.590 134.015 1.00 50.70 O
ATOM 5 O5' C B 105 45.178 0.310 135.119 1.00 50.98 O
ATOM 6 C5' C B 105 44.477 0.824 136.242 1.00 51.74 C
ATOM 7 C4' C B 105 45.121 0.422 137.541 1.00 52.46 C
ATOM 8 O4' C B 105 45.425 -1.005 137.502 1.00 52.21 O
ATOM 9 C3' C B 105 46.431 1.121 137.854 1.00 52.75 C
ATOM 10 O3' C B 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 11 C2' C B 105 47.448 0.151 137.308 1.00 52.26 C
ATOM 12 O2' C B 105 48.708 0.273 137.872 1.00 52.64 O
ATOM 13 C1' C B 105 46.815 -1.194 137.650 1.00 52.27 C
ATOM 14 N1 C B 105 47.235 -2.287 136.749 1.00 51.57 N
ATOM 15 C2 C B 105 48.554 -2.743 136.812 1.00 51.56 C
ATOM 16 O2 C B 105 49.342 -2.273 137.620 1.00 52.12 O
ATOM 17 N3 C B 105 48.972 -3.700 135.973 1.00 50.95 N
ATOM 18 C4 C B 105 48.119 -4.209 135.093 1.00 50.36 C
ATOM 19 N4 C B 105 48.579 -5.160 134.301 1.00 49.82 N
ATOM 20 C5 C B 105 46.783 -3.762 135.008 1.00 50.36 C
ATOM 21 C6 C B 105 46.382 -2.807 135.842 1.00 50.96 C
ATOM 22 P G B 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 23 OP1 G B 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 24 OP2 G B 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 25 O5' G B 106 45.087 2.727 140.518 1.00 56.31 O
TER
Atoms:
OP1: (45.436,-3.501,143.787)
OP2: (46.641,-1.317,143.414)
C3': (42.120,-3.718,140.937)
C1': (43.380,-2.691,139.262)
C5': (43.015,-2.248,142.809)
O4': (43.456,-1.886,140.419)
C8: (45.668,-3.396,140.050)
O2': (41.020,-2.982,138.940)
C6: (46.783,-5.852,137.786)
C5: (46.209,-4.864,138.596)
C4: (44.974,-4.411,138.239)
P: (45.420,-2.037,143.784)
C4': (42.477,-2.331,141.393)
C2': (42.185,-3.620,139.435)
C2: (44.908,-5.761,136.505)
N1: (46.110,-6.271,136.710)
N3: (44.263,-4.828,137.191)
N6: (47.976,-6.407,137.987)
N7: (46.631,-4.218,139.751)
N9: (44.630,-3.456,139.163)
O5': (44.216,-1.518,142.894)
O3': (40.873,-4.105,141.409)
OP2: (46.641,-1.317,143.414)
C3': (42.120,-3.718,140.937)
C1': (43.380,-2.691,139.262)
C5': (43.015,-2.248,142.809)
O4': (43.456,-1.886,140.419)
C8: (45.668,-3.396,140.050)
O2': (41.020,-2.982,138.940)
C6: (46.783,-5.852,137.786)
C5: (46.209,-4.864,138.596)
C4: (44.974,-4.411,138.239)
P: (45.420,-2.037,143.784)
C4': (42.477,-2.331,141.393)
C2': (42.185,-3.620,139.435)
C2: (44.908,-5.761,136.505)
N1: (46.110,-6.271,136.710)
N3: (44.263,-4.828,137.191)
N6: (47.976,-6.407,137.987)
N7: (46.631,-4.218,139.751)
N9: (44.630,-3.456,139.163)
O5': (44.216,-1.518,142.894)
O3': (40.873,-4.105,141.409)
C2: (48.554,-2.743,136.812)
OP1: (44.286,0.466,132.764)
OP2: (45.026,2.590,134.015)
C4: (48.119,-4.209,135.093)
O5': (45.178,0.310,135.119)
C3': (46.431,1.121,137.854)
C1': (46.815,-1.194,137.650)
O4': (45.425,-1.005,137.502)
C5': (44.477,0.824,136.242)
P: (45.192,1.115,133.750)
O2: (49.342,-2.273,137.620)
C4': (45.121,0.422,137.541)
C2': (47.448,0.151,137.308)
O2': (48.708,0.273,137.872)
N1: (47.235,-2.287,136.749)
N3: (48.972,-3.700,135.973)
N4: (48.579,-5.160,134.301)
C6: (46.382,-2.807,135.842)
C5: (46.783,-3.762,135.008)
O3': (46.588,1.199,139.250)
OP1: (44.286,0.466,132.764)
OP2: (45.026,2.590,134.015)
C4: (48.119,-4.209,135.093)
O5': (45.178,0.310,135.119)
C3': (46.431,1.121,137.854)
C1': (46.815,-1.194,137.650)
O4': (45.425,-1.005,137.502)
C5': (44.477,0.824,136.242)
P: (45.192,1.115,133.750)
O2: (49.342,-2.273,137.620)
C4': (45.121,0.422,137.541)
C2': (47.448,0.151,137.308)
O2': (48.708,0.273,137.872)
N1: (47.235,-2.287,136.749)
N3: (48.972,-3.700,135.973)
N4: (48.579,-5.160,134.301)
C6: (46.382,-2.807,135.842)
C5: (46.783,-3.762,135.008)
O3': (46.588,1.199,139.250)
Image (generated by PyMOL):