Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0948:0969
Extra
PDB:
ATOM 1 O3' G A 947 64.971 53.305 120.593 1.00 80.53 O
ATOM 2 P A A 948 63.481 52.714 120.396 1.00 76.57 P
ATOM 3 OP1 A A 948 62.535 53.671 121.018 1.00 78.12 O
ATOM 4 OP2 A A 948 63.422 51.287 120.786 1.00 77.15 O
ATOM 5 O5' A A 948 63.283 52.759 118.814 1.00 72.73 O
ATOM 6 C5' A A 948 64.014 51.862 117.948 1.00 64.91 C
ATOM 7 C4' A A 948 64.286 52.506 116.603 1.00 60.20 C
ATOM 8 O4' A A 948 63.033 52.942 116.016 1.00 57.95 O
ATOM 9 C3' A A 948 65.169 53.747 116.588 1.00 58.29 C
ATOM 10 O3' A A 948 66.559 53.392 116.592 1.00 58.12 O
ATOM 11 C2' A A 948 64.745 54.416 115.288 1.00 56.86 C
ATOM 12 O2' A A 948 65.317 53.805 114.154 1.00 55.68 O
ATOM 13 C1' A A 948 63.238 54.137 115.279 1.00 58.08 C
ATOM 14 N9 A A 948 62.430 55.202 115.888 1.00 59.52 N
ATOM 15 C8 A A 948 61.561 55.087 116.947 1.00 59.03 C
ATOM 16 N7 A A 948 61.001 56.219 117.297 1.00 59.15 N
ATOM 17 C5 A A 948 61.526 57.143 116.406 1.00 58.29 C
ATOM 18 C6 A A 948 61.329 58.522 116.252 1.00 57.64 C
ATOM 19 N6 A A 948 60.524 59.245 117.028 1.00 57.43 N
ATOM 20 N1 A A 948 61.994 59.145 115.261 1.00 57.49 N
ATOM 21 C2 A A 948 62.798 58.427 114.483 1.00 57.76 C
ATOM 22 N3 A A 948 63.071 57.128 114.527 1.00 60.07 N
ATOM 23 C4 A A 948 62.397 56.532 115.525 1.00 59.36 C
ATOM 24 P C A 949 67.686 54.501 116.927 1.00 58.31 P
ATOM 25 OP1 C A 949 68.871 53.826 117.509 1.00 59.59 O
ATOM 26 OP2 C A 949 67.047 55.616 117.677 1.00 57.69 O
ATOM 27 O5' C A 949 68.157 55.008 115.495 1.00 55.45 O
TER
ATOM 1 O3' U B 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 2 P C B 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 3 OP1 C B 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 4 OP2 C B 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 5 O5' C B 969 61.033 55.346 110.942 1.00 50.42 O
ATOM 6 C5' C B 969 61.334 53.977 111.219 1.00 50.83 C
ATOM 7 C4' C B 969 60.406 53.449 112.288 1.00 51.67 C
ATOM 8 O4' C B 969 60.666 54.100 113.568 1.00 51.76 O
ATOM 9 C3' C B 969 58.936 53.733 112.066 1.00 50.96 C
ATOM 10 O3' C B 969 58.323 52.922 111.080 1.00 50.86 O
ATOM 11 C2' C B 969 58.372 53.533 113.462 1.00 51.30 C
ATOM 12 O2' C B 969 58.267 52.171 113.823 1.00 51.60 O
ATOM 13 C1' C B 969 59.451 54.213 114.303 1.00 50.74 C
ATOM 14 N1 C B 969 59.132 55.644 114.483 1.00 52.98 N
ATOM 15 C2 C B 969 58.250 56.021 115.512 1.00 54.50 C
ATOM 16 O2 C B 969 57.778 55.143 116.257 1.00 57.19 O
ATOM 17 N3 C B 969 57.931 57.333 115.663 1.00 52.84 N
ATOM 18 C4 C B 969 58.449 58.245 114.837 1.00 52.43 C
ATOM 19 N4 C B 969 58.100 59.520 115.012 1.00 51.83 N
ATOM 20 C5 C B 969 59.348 57.891 113.791 1.00 52.94 C
ATOM 21 C6 C B 969 59.664 56.595 113.653 1.00 53.71 C
ATOM 22 P C B 970 57.106 53.530 110.228 1.00 52.98 P
ATOM 23 OP1 C B 970 56.208 52.430 109.803 1.00 53.83 O
ATOM 24 OP2 C B 970 57.698 54.437 109.196 1.00 51.23 O
ATOM 25 O5' C B 970 56.313 54.370 111.331 1.00 50.00 O
TER
ATOM 2 P A A 948 63.481 52.714 120.396 1.00 76.57 P
ATOM 3 OP1 A A 948 62.535 53.671 121.018 1.00 78.12 O
ATOM 4 OP2 A A 948 63.422 51.287 120.786 1.00 77.15 O
ATOM 5 O5' A A 948 63.283 52.759 118.814 1.00 72.73 O
ATOM 6 C5' A A 948 64.014 51.862 117.948 1.00 64.91 C
ATOM 7 C4' A A 948 64.286 52.506 116.603 1.00 60.20 C
ATOM 8 O4' A A 948 63.033 52.942 116.016 1.00 57.95 O
ATOM 9 C3' A A 948 65.169 53.747 116.588 1.00 58.29 C
ATOM 10 O3' A A 948 66.559 53.392 116.592 1.00 58.12 O
ATOM 11 C2' A A 948 64.745 54.416 115.288 1.00 56.86 C
ATOM 12 O2' A A 948 65.317 53.805 114.154 1.00 55.68 O
ATOM 13 C1' A A 948 63.238 54.137 115.279 1.00 58.08 C
ATOM 14 N9 A A 948 62.430 55.202 115.888 1.00 59.52 N
ATOM 15 C8 A A 948 61.561 55.087 116.947 1.00 59.03 C
ATOM 16 N7 A A 948 61.001 56.219 117.297 1.00 59.15 N
ATOM 17 C5 A A 948 61.526 57.143 116.406 1.00 58.29 C
ATOM 18 C6 A A 948 61.329 58.522 116.252 1.00 57.64 C
ATOM 19 N6 A A 948 60.524 59.245 117.028 1.00 57.43 N
ATOM 20 N1 A A 948 61.994 59.145 115.261 1.00 57.49 N
ATOM 21 C2 A A 948 62.798 58.427 114.483 1.00 57.76 C
ATOM 22 N3 A A 948 63.071 57.128 114.527 1.00 60.07 N
ATOM 23 C4 A A 948 62.397 56.532 115.525 1.00 59.36 C
ATOM 24 P C A 949 67.686 54.501 116.927 1.00 58.31 P
ATOM 25 OP1 C A 949 68.871 53.826 117.509 1.00 59.59 O
ATOM 26 OP2 C A 949 67.047 55.616 117.677 1.00 57.69 O
ATOM 27 O5' C A 949 68.157 55.008 115.495 1.00 55.45 O
TER
ATOM 1 O3' U B 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 2 P C B 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 3 OP1 C B 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 4 OP2 C B 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 5 O5' C B 969 61.033 55.346 110.942 1.00 50.42 O
ATOM 6 C5' C B 969 61.334 53.977 111.219 1.00 50.83 C
ATOM 7 C4' C B 969 60.406 53.449 112.288 1.00 51.67 C
ATOM 8 O4' C B 969 60.666 54.100 113.568 1.00 51.76 O
ATOM 9 C3' C B 969 58.936 53.733 112.066 1.00 50.96 C
ATOM 10 O3' C B 969 58.323 52.922 111.080 1.00 50.86 O
ATOM 11 C2' C B 969 58.372 53.533 113.462 1.00 51.30 C
ATOM 12 O2' C B 969 58.267 52.171 113.823 1.00 51.60 O
ATOM 13 C1' C B 969 59.451 54.213 114.303 1.00 50.74 C
ATOM 14 N1 C B 969 59.132 55.644 114.483 1.00 52.98 N
ATOM 15 C2 C B 969 58.250 56.021 115.512 1.00 54.50 C
ATOM 16 O2 C B 969 57.778 55.143 116.257 1.00 57.19 O
ATOM 17 N3 C B 969 57.931 57.333 115.663 1.00 52.84 N
ATOM 18 C4 C B 969 58.449 58.245 114.837 1.00 52.43 C
ATOM 19 N4 C B 969 58.100 59.520 115.012 1.00 51.83 N
ATOM 20 C5 C B 969 59.348 57.891 113.791 1.00 52.94 C
ATOM 21 C6 C B 969 59.664 56.595 113.653 1.00 53.71 C
ATOM 22 P C B 970 57.106 53.530 110.228 1.00 52.98 P
ATOM 23 OP1 C B 970 56.208 52.430 109.803 1.00 53.83 O
ATOM 24 OP2 C B 970 57.698 54.437 109.196 1.00 51.23 O
ATOM 25 O5' C B 970 56.313 54.370 111.331 1.00 50.00 O
TER
Atoms:
OP1: (62.535,53.671,121.018)
OP2: (63.422,51.287,120.786)
C3': (65.169,53.747,116.588)
C1': (63.238,54.137,115.279)
C5': (64.014,51.862,117.948)
O4': (63.033,52.942,116.016)
C8: (61.561,55.087,116.947)
O2': (65.317,53.805,114.154)
C6: (61.329,58.522,116.252)
C5: (61.526,57.143,116.406)
C4: (62.397,56.532,115.525)
P: (63.481,52.714,120.396)
C4': (64.286,52.506,116.603)
C2': (64.745,54.416,115.288)
C2: (62.798,58.427,114.483)
N1: (61.994,59.145,115.261)
N3: (63.071,57.128,114.527)
N6: (60.524,59.245,117.028)
N7: (61.001,56.219,117.297)
N9: (62.430,55.202,115.888)
O5': (63.283,52.759,118.814)
O3': (66.559,53.392,116.592)
OP2: (63.422,51.287,120.786)
C3': (65.169,53.747,116.588)
C1': (63.238,54.137,115.279)
C5': (64.014,51.862,117.948)
O4': (63.033,52.942,116.016)
C8: (61.561,55.087,116.947)
O2': (65.317,53.805,114.154)
C6: (61.329,58.522,116.252)
C5: (61.526,57.143,116.406)
C4: (62.397,56.532,115.525)
P: (63.481,52.714,120.396)
C4': (64.286,52.506,116.603)
C2': (64.745,54.416,115.288)
C2: (62.798,58.427,114.483)
N1: (61.994,59.145,115.261)
N3: (63.071,57.128,114.527)
N6: (60.524,59.245,117.028)
N7: (61.001,56.219,117.297)
N9: (62.430,55.202,115.888)
O5': (63.283,52.759,118.814)
O3': (66.559,53.392,116.592)
C2: (58.250,56.021,115.512)
OP1: (63.261,55.706,109.841)
OP2: (61.070,56.198,108.604)
C4: (58.449,58.245,114.837)
O5': (61.033,55.346,110.942)
C3': (58.936,53.733,112.066)
C1': (59.451,54.213,114.303)
O4': (60.666,54.100,113.568)
C5': (61.334,53.977,111.219)
P: (61.856,56.182,109.867)
O2: (57.778,55.143,116.257)
C4': (60.406,53.449,112.288)
C2': (58.372,53.533,113.462)
O2': (58.267,52.171,113.823)
N1: (59.132,55.644,114.483)
N3: (57.931,57.333,115.663)
N4: (58.100,59.520,115.012)
C6: (59.664,56.595,113.653)
C5: (59.348,57.891,113.791)
O3': (58.323,52.922,111.080)
OP1: (63.261,55.706,109.841)
OP2: (61.070,56.198,108.604)
C4: (58.449,58.245,114.837)
O5': (61.033,55.346,110.942)
C3': (58.936,53.733,112.066)
C1': (59.451,54.213,114.303)
O4': (60.666,54.100,113.568)
C5': (61.334,53.977,111.219)
P: (61.856,56.182,109.867)
O2: (57.778,55.143,116.257)
C4': (60.406,53.449,112.288)
C2': (58.372,53.533,113.462)
O2': (58.267,52.171,113.823)
N1: (59.132,55.644,114.483)
N3: (57.931,57.333,115.663)
N4: (58.100,59.520,115.012)
C6: (59.664,56.595,113.653)
C5: (59.348,57.891,113.791)
O3': (58.323,52.922,111.080)
Image (generated by PyMOL):