ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2A43:A17:A15

Extra

PDB:
ATOM 1 O3' A A 16 2.591 31.015 13.654 1.00 15.04 O
ATOM 2 P A A 17 2.561 32.249 14.656 1.00 17.21 P
ATOM 3 OP1 A A 17 2.066 33.391 13.833 1.00 18.30 O
ATOM 4 OP2 A A 17 3.810 32.330 15.453 1.00 19.10 O
ATOM 5 O5' A A 17 1.466 31.858 15.739 1.00 16.19 O
ATOM 6 C5' A A 17 0.147 31.554 15.328 1.00 15.34 C
ATOM 7 C4' A A 17 -0.796 31.833 16.475 1.00 14.12 C
ATOM 8 O4' A A 17 -0.468 30.885 17.515 1.00 15.29 O
ATOM 9 C3' A A 17 -0.638 33.184 17.185 1.00 14.35 C
ATOM 10 O3' A A 17 -1.521 34.097 16.535 1.00 14.87 O
ATOM 11 C2' A A 17 -1.086 32.869 18.605 1.00 15.04 C
ATOM 12 O2' A A 17 -2.509 32.901 18.647 1.00 16.57 O
ATOM 13 C1' A A 17 -0.618 31.441 18.799 1.00 15.87 C
ATOM 14 N9 A A 17 0.658 31.264 19.478 1.00 14.86 N
ATOM 15 C8 A A 17 1.925 31.523 18.994 1.00 18.71 C
ATOM 16 N7 A A 17 2.859 31.215 19.879 1.00 18.58 N
ATOM 17 C5 A A 17 2.176 30.765 20.983 1.00 16.18 C
ATOM 18 C6 A A 17 2.640 30.305 22.238 1.00 18.46 C
ATOM 19 N6 A A 17 3.904 30.261 22.596 1.00 20.02 N
ATOM 20 N1 A A 17 1.709 29.902 23.090 1.00 16.47 N
ATOM 21 C2 A A 17 0.449 29.970 22.709 1.00 16.78 C
ATOM 22 N3 A A 17 -0.142 30.360 21.613 1.00 14.48 N
ATOM 23 C4 A A 17 0.812 30.786 20.755 1.00 14.26 C
ATOM 24 P A A 18 -1.361 35.682 16.598 1.00 15.61 P
ATOM 25 OP1 A A 18 0.035 36.054 16.972 1.00 17.46 O
ATOM 26 OP2 A A 18 -2.499 36.265 17.330 1.00 16.21 O
ATOM 27 O5' A A 18 -1.664 36.045 15.088 1.00 16.58 O
TER

ATOM 1 O3' U B 14 -1.806 26.954 18.305 1.00 22.48 O
ATOM 2 P C B 15 -0.928 26.026 17.375 1.00 32.00 P
ATOM 3 OP1 C B 15 -1.267 26.382 15.989 1.00 39.77 O
ATOM 4 OP2 C B 15 -1.089 24.607 17.782 1.00 43.96 O
ATOM 5 O5' C B 15 0.526 26.525 17.762 1.00 32.39 O
ATOM 6 C5' C B 15 1.121 27.773 17.435 1.00 29.91 C
ATOM 7 C4' C B 15 2.604 27.820 17.836 1.00 30.16 C
ATOM 8 O4' C B 15 2.614 28.035 19.292 1.00 38.80 O
ATOM 9 C3' C B 15 3.322 26.491 17.654 1.00 28.04 C
ATOM 10 O3' C B 15 4.660 26.703 17.193 1.00 27.39 O
ATOM 11 C2' C B 15 3.250 25.838 19.031 1.00 29.71 C
ATOM 12 O2' C B 15 4.284 24.901 19.204 1.00 35.76 O
ATOM 13 C1' C B 15 3.503 27.089 19.883 1.00 41.14 C
ATOM 14 N1 C B 15 3.095 27.002 21.287 1.00 42.19 N
ATOM 15 C2 C B 15 4.067 27.062 22.285 1.00 41.45 C
ATOM 16 O2 C B 15 5.237 27.155 21.887 1.00 44.75 O
ATOM 17 N3 C B 15 3.683 27.044 23.588 1.00 40.61 N
ATOM 18 C4 C B 15 2.412 26.833 23.917 1.00 36.12 C
ATOM 19 N4 C B 15 2.096 26.840 25.222 1.00 31.35 N
ATOM 20 C5 C B 15 1.411 26.743 22.904 1.00 31.61 C
ATOM 21 C6 C B 15 1.786 26.832 21.638 1.00 37.19 C
ATOM 22 P A B 16 5.095 26.208 15.759 1.00 21.32 P
ATOM 23 OP1 A B 16 4.309 25.012 15.344 1.00 22.72 O
ATOM 24 OP2 A B 16 6.571 26.177 15.762 1.00 25.92 O
ATOM 25 O5' A B 16 4.560 27.408 14.880 1.00 19.15 O
TER

Atoms:
OP1: (2.066,33.391,13.833)
OP2: (3.810,32.330,15.453)
C3': (-0.638,33.184,17.185)
C1': (-0.618,31.441,18.799)
C5': (0.147,31.554,15.328)
O4': (-0.468,30.885,17.515)
C8: (1.925,31.523,18.994)
O2': (-2.509,32.901,18.647)
C6: (2.640,30.305,22.238)
C5: (2.176,30.765,20.983)
C4: (0.812,30.786,20.755)
P: (2.561,32.249,14.656)
C4': (-0.796,31.833,16.475)
C2': (-1.086,32.869,18.605)
C2: (0.449,29.970,22.709)
N1: (1.709,29.902,23.090)
N3: (-0.142,30.360,21.613)
N6: (3.904,30.261,22.596)
N7: (2.859,31.215,19.879)
N9: (0.658,31.264,19.478)
O5': (1.466,31.858,15.739)
O3': (-1.521,34.097,16.535)
C2: (4.067,27.062,22.285)
OP1: (-1.267,26.382,15.989)
OP2: (-1.089,24.607,17.782)
C4: (2.412,26.833,23.917)
O5': (0.526,26.525,17.762)
C3': (3.322,26.491,17.654)
C1': (3.503,27.089,19.883)
O4': (2.614,28.035,19.292)
C5': (1.121,27.773,17.435)
P: (-0.928,26.026,17.375)
O2: (5.237,27.155,21.887)
C4': (2.604,27.820,17.836)
C2': (3.250,25.838,19.031)
O2': (4.284,24.901,19.204)
N1: (3.095,27.002,21.287)
N3: (3.683,27.044,23.588)
N4: (2.096,26.840,25.222)
C6: (1.786,26.832,21.638)
C5: (1.411,26.743,22.904)
O3': (4.660,26.703,17.193)
Image (generated by PyMOL):
PyMOL image
show in jmol