Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1850:1760
Extra
PDB:
ATOM 1 O3' U A 849 24.070 -1.841 111.771 1.00 40.85 O
ATOM 2 P A A 850 25.494 -2.481 111.609 1.00 40.52 P
ATOM 3 OP1 A A 850 25.334 -3.926 111.402 1.00 40.39 O
ATOM 4 OP2 A A 850 26.288 -2.024 112.738 1.00 40.84 O
ATOM 5 O5' A A 850 25.969 -1.813 110.282 1.00 40.18 O
ATOM 6 C5' A A 850 25.369 -2.165 109.062 1.00 39.85 C
ATOM 7 C4' A A 850 26.407 -2.419 108.029 1.00 39.52 C
ATOM 8 O4' A A 850 27.051 -1.143 107.652 1.00 39.47 O
ATOM 9 C3' A A 850 27.528 -3.339 108.482 1.00 39.54 C
ATOM 10 O3' A A 850 27.894 -4.186 107.401 1.00 39.20 O
ATOM 11 C2' A A 850 28.669 -2.350 108.759 1.00 39.62 C
ATOM 12 O2' A A 850 29.938 -2.899 108.644 1.00 39.52 O
ATOM 13 C1' A A 850 28.436 -1.304 107.691 1.00 39.42 C
ATOM 14 N9 A A 850 29.040 -0.020 107.983 1.00 39.56 N
ATOM 15 C8 A A 850 29.808 0.317 109.060 1.00 39.85 C
ATOM 16 N7 A A 850 30.228 1.563 109.036 1.00 39.93 N
ATOM 17 C5 A A 850 29.723 2.060 107.873 1.00 39.68 C
ATOM 18 C6 A A 850 29.789 3.305 107.304 1.00 39.64 C
ATOM 19 N6 A A 850 30.473 4.262 107.897 1.00 39.87 N
ATOM 20 N1 A A 850 29.162 3.564 106.125 1.00 39.39 N
ATOM 21 C2 A A 850 28.498 2.567 105.571 1.00 39.18 C
ATOM 22 N3 A A 850 28.352 1.324 106.038 1.00 39.19 N
ATOM 23 C4 A A 850 28.982 1.124 107.211 1.00 39.45 C
ATOM 24 P G A 851 28.173 -5.746 107.628 1.00 35.05 P
ATOM 25 OP1 G A 851 26.988 -6.324 108.349 1.00 35.26 O
ATOM 26 OP2 G A 851 29.521 -5.893 108.239 1.00 35.16 O
ATOM 27 O5' G A 851 28.202 -6.271 106.134 1.00 34.65 O
TER
ATOM 1 O3' G B 759 33.772 6.759 108.799 1.00 37.90 O
ATOM 2 P A B 760 32.664 6.988 109.894 1.00 37.24 P
ATOM 3 OP1 A B 760 32.935 8.333 110.487 1.00 37.57 O
ATOM 4 OP2 A B 760 32.637 5.809 110.761 1.00 37.35 O
ATOM 5 O5' A B 760 31.352 6.993 109.046 1.00 37.03 O
ATOM 6 C5' A B 760 31.197 7.864 107.970 1.00 36.85 C
ATOM 7 C4' A B 760 29.791 8.331 107.900 1.00 36.93 C
ATOM 8 O4' A B 760 28.954 7.299 107.290 1.00 36.68 O
ATOM 9 C3' A B 760 29.163 8.656 109.241 1.00 37.36 C
ATOM 10 O3' A B 760 28.715 9.997 109.222 1.00 37.55 O
ATOM 11 C2' A B 760 27.968 7.690 109.356 1.00 37.31 C
ATOM 12 O2' A B 760 26.836 8.258 109.985 1.00 37.61 O
ATOM 13 C1' A B 760 27.697 7.333 107.890 1.00 36.89 C
ATOM 14 N9 A B 760 27.036 6.048 107.642 1.00 36.70 N
ATOM 15 C8 A B 760 27.049 4.872 108.344 1.00 36.76 C
ATOM 16 N7 A B 760 26.303 3.898 107.797 1.00 36.55 N
ATOM 17 C5 A B 760 25.765 4.487 106.644 1.00 36.34 C
ATOM 18 C6 A B 760 24.919 4.020 105.616 1.00 36.08 C
ATOM 19 N6 A B 760 24.439 2.766 105.588 1.00 35.98 N
ATOM 20 N1 A B 760 24.603 4.859 104.596 1.00 35.94 N
ATOM 21 C2 A B 760 25.055 6.100 104.568 1.00 36.04 C
ATOM 22 N3 A B 760 25.860 6.652 105.472 1.00 36.28 N
ATOM 23 C4 A B 760 26.211 5.804 106.516 1.00 36.43 C
ATOM 24 P A B 761 29.453 11.075 110.139 1.00 48.46 P
ATOM 25 OP1 A B 761 29.559 10.472 111.536 1.00 48.77 O
ATOM 26 OP2 A B 761 28.734 12.347 109.970 1.00 48.63 O
ATOM 27 O5' A B 761 30.907 11.161 109.510 1.00 48.25 O
TER
ATOM 2 P A A 850 25.494 -2.481 111.609 1.00 40.52 P
ATOM 3 OP1 A A 850 25.334 -3.926 111.402 1.00 40.39 O
ATOM 4 OP2 A A 850 26.288 -2.024 112.738 1.00 40.84 O
ATOM 5 O5' A A 850 25.969 -1.813 110.282 1.00 40.18 O
ATOM 6 C5' A A 850 25.369 -2.165 109.062 1.00 39.85 C
ATOM 7 C4' A A 850 26.407 -2.419 108.029 1.00 39.52 C
ATOM 8 O4' A A 850 27.051 -1.143 107.652 1.00 39.47 O
ATOM 9 C3' A A 850 27.528 -3.339 108.482 1.00 39.54 C
ATOM 10 O3' A A 850 27.894 -4.186 107.401 1.00 39.20 O
ATOM 11 C2' A A 850 28.669 -2.350 108.759 1.00 39.62 C
ATOM 12 O2' A A 850 29.938 -2.899 108.644 1.00 39.52 O
ATOM 13 C1' A A 850 28.436 -1.304 107.691 1.00 39.42 C
ATOM 14 N9 A A 850 29.040 -0.020 107.983 1.00 39.56 N
ATOM 15 C8 A A 850 29.808 0.317 109.060 1.00 39.85 C
ATOM 16 N7 A A 850 30.228 1.563 109.036 1.00 39.93 N
ATOM 17 C5 A A 850 29.723 2.060 107.873 1.00 39.68 C
ATOM 18 C6 A A 850 29.789 3.305 107.304 1.00 39.64 C
ATOM 19 N6 A A 850 30.473 4.262 107.897 1.00 39.87 N
ATOM 20 N1 A A 850 29.162 3.564 106.125 1.00 39.39 N
ATOM 21 C2 A A 850 28.498 2.567 105.571 1.00 39.18 C
ATOM 22 N3 A A 850 28.352 1.324 106.038 1.00 39.19 N
ATOM 23 C4 A A 850 28.982 1.124 107.211 1.00 39.45 C
ATOM 24 P G A 851 28.173 -5.746 107.628 1.00 35.05 P
ATOM 25 OP1 G A 851 26.988 -6.324 108.349 1.00 35.26 O
ATOM 26 OP2 G A 851 29.521 -5.893 108.239 1.00 35.16 O
ATOM 27 O5' G A 851 28.202 -6.271 106.134 1.00 34.65 O
TER
ATOM 1 O3' G B 759 33.772 6.759 108.799 1.00 37.90 O
ATOM 2 P A B 760 32.664 6.988 109.894 1.00 37.24 P
ATOM 3 OP1 A B 760 32.935 8.333 110.487 1.00 37.57 O
ATOM 4 OP2 A B 760 32.637 5.809 110.761 1.00 37.35 O
ATOM 5 O5' A B 760 31.352 6.993 109.046 1.00 37.03 O
ATOM 6 C5' A B 760 31.197 7.864 107.970 1.00 36.85 C
ATOM 7 C4' A B 760 29.791 8.331 107.900 1.00 36.93 C
ATOM 8 O4' A B 760 28.954 7.299 107.290 1.00 36.68 O
ATOM 9 C3' A B 760 29.163 8.656 109.241 1.00 37.36 C
ATOM 10 O3' A B 760 28.715 9.997 109.222 1.00 37.55 O
ATOM 11 C2' A B 760 27.968 7.690 109.356 1.00 37.31 C
ATOM 12 O2' A B 760 26.836 8.258 109.985 1.00 37.61 O
ATOM 13 C1' A B 760 27.697 7.333 107.890 1.00 36.89 C
ATOM 14 N9 A B 760 27.036 6.048 107.642 1.00 36.70 N
ATOM 15 C8 A B 760 27.049 4.872 108.344 1.00 36.76 C
ATOM 16 N7 A B 760 26.303 3.898 107.797 1.00 36.55 N
ATOM 17 C5 A B 760 25.765 4.487 106.644 1.00 36.34 C
ATOM 18 C6 A B 760 24.919 4.020 105.616 1.00 36.08 C
ATOM 19 N6 A B 760 24.439 2.766 105.588 1.00 35.98 N
ATOM 20 N1 A B 760 24.603 4.859 104.596 1.00 35.94 N
ATOM 21 C2 A B 760 25.055 6.100 104.568 1.00 36.04 C
ATOM 22 N3 A B 760 25.860 6.652 105.472 1.00 36.28 N
ATOM 23 C4 A B 760 26.211 5.804 106.516 1.00 36.43 C
ATOM 24 P A B 761 29.453 11.075 110.139 1.00 48.46 P
ATOM 25 OP1 A B 761 29.559 10.472 111.536 1.00 48.77 O
ATOM 26 OP2 A B 761 28.734 12.347 109.970 1.00 48.63 O
ATOM 27 O5' A B 761 30.907 11.161 109.510 1.00 48.25 O
TER
Atoms:
OP1: (25.334,-3.926,111.402)
OP2: (26.288,-2.024,112.738)
C3': (27.528,-3.339,108.482)
C1': (28.436,-1.304,107.691)
C5': (25.369,-2.165,109.062)
O4': (27.051,-1.143,107.652)
C8: (29.808,0.317,109.060)
O2': (29.938,-2.899,108.644)
C6: (29.789,3.305,107.304)
C5: (29.723,2.060,107.873)
C4: (28.982,1.124,107.211)
P: (25.494,-2.481,111.609)
C4': (26.407,-2.419,108.029)
C2': (28.669,-2.350,108.759)
C2: (28.498,2.567,105.571)
N1: (29.162,3.564,106.125)
N3: (28.352,1.324,106.038)
N6: (30.473,4.262,107.897)
N7: (30.228,1.563,109.036)
N9: (29.040,-0.020,107.983)
O5': (25.969,-1.813,110.282)
O3': (27.894,-4.186,107.401)
OP2: (26.288,-2.024,112.738)
C3': (27.528,-3.339,108.482)
C1': (28.436,-1.304,107.691)
C5': (25.369,-2.165,109.062)
O4': (27.051,-1.143,107.652)
C8: (29.808,0.317,109.060)
O2': (29.938,-2.899,108.644)
C6: (29.789,3.305,107.304)
C5: (29.723,2.060,107.873)
C4: (28.982,1.124,107.211)
P: (25.494,-2.481,111.609)
C4': (26.407,-2.419,108.029)
C2': (28.669,-2.350,108.759)
C2: (28.498,2.567,105.571)
N1: (29.162,3.564,106.125)
N3: (28.352,1.324,106.038)
N6: (30.473,4.262,107.897)
N7: (30.228,1.563,109.036)
N9: (29.040,-0.020,107.983)
O5': (25.969,-1.813,110.282)
O3': (27.894,-4.186,107.401)
OP1: (32.935,8.333,110.487)
OP2: (32.637,5.809,110.761)
C3': (29.163,8.656,109.241)
C1': (27.697,7.333,107.890)
C5': (31.197,7.864,107.970)
O4': (28.954,7.299,107.290)
C8: (27.049,4.872,108.344)
O2': (26.836,8.258,109.985)
C6: (24.919,4.020,105.616)
C5: (25.765,4.487,106.644)
C4: (26.211,5.804,106.516)
P: (32.664,6.988,109.894)
C4': (29.791,8.331,107.900)
C2': (27.968,7.690,109.356)
C2: (25.055,6.100,104.568)
N1: (24.603,4.859,104.596)
N3: (25.860,6.652,105.472)
N6: (24.439,2.766,105.588)
N7: (26.303,3.898,107.797)
N9: (27.036,6.048,107.642)
O5': (31.352,6.993,109.046)
O3': (28.715,9.997,109.222)
OP2: (32.637,5.809,110.761)
C3': (29.163,8.656,109.241)
C1': (27.697,7.333,107.890)
C5': (31.197,7.864,107.970)
O4': (28.954,7.299,107.290)
C8: (27.049,4.872,108.344)
O2': (26.836,8.258,109.985)
C6: (24.919,4.020,105.616)
C5: (25.765,4.487,106.644)
C4: (26.211,5.804,106.516)
P: (32.664,6.988,109.894)
C4': (29.791,8.331,107.900)
C2': (27.968,7.690,109.356)
C2: (25.055,6.100,104.568)
N1: (24.603,4.859,104.596)
N3: (25.860,6.652,105.472)
N6: (24.439,2.766,105.588)
N7: (26.303,3.898,107.797)
N9: (27.036,6.048,107.642)
O5': (31.352,6.993,109.046)
O3': (28.715,9.997,109.222)
Image (generated by PyMOL):