Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2004:A1345
Extra
PDB:
ATOM 1 O3' G A2003 -45.332 -87.380 -4.423 1.00 49.65 O
ATOM 2 P G A2004 -46.329 -87.373 -3.181 1.00 54.31 P
ATOM 3 OP1 G A2004 -46.123 -88.644 -2.432 1.00 58.84 O
ATOM 4 OP2 G A2004 -47.667 -87.029 -3.721 1.00 56.59 O
ATOM 5 O5' G A2004 -45.804 -86.155 -2.272 1.00 46.51 O
ATOM 6 C5' G A2004 -44.462 -86.214 -1.815 1.00 45.22 C
ATOM 7 C4' G A2004 -43.993 -85.011 -1.020 1.00 46.00 C
ATOM 8 O4' G A2004 -43.715 -83.886 -1.892 1.00 52.84 O
ATOM 9 C3' G A2004 -44.955 -84.469 0.021 1.00 47.45 C
ATOM 10 O3' G A2004 -44.893 -85.223 1.220 1.00 41.63 O
ATOM 11 C2' G A2004 -44.333 -83.103 0.246 1.00 54.63 C
ATOM 12 O2' G A2004 -43.177 -83.208 1.058 1.00 57.61 O
ATOM 13 C1' G A2004 -44.029 -82.692 -1.199 1.00 55.78 C
ATOM 14 N9 G A2004 -45.218 -82.129 -1.824 1.00 56.80 N
ATOM 15 C8 G A2004 -46.053 -82.779 -2.693 1.00 64.23 C
ATOM 16 N7 G A2004 -47.063 -82.057 -3.093 1.00 66.98 N
ATOM 17 C5 G A2004 -46.895 -80.850 -2.439 1.00 58.96 C
ATOM 18 C6 G A2004 -47.695 -79.690 -2.488 1.00 59.15 C
ATOM 19 O6 G A2004 -48.728 -79.514 -3.147 1.00 66.55 O
ATOM 20 N1 G A2004 -47.175 -78.688 -1.679 1.00 57.71 N
ATOM 21 C2 G A2004 -46.029 -78.803 -0.927 1.00 54.21 C
ATOM 22 N2 G A2004 -45.671 -77.735 -0.203 1.00 60.31 N
ATOM 23 N3 G A2004 -45.275 -79.889 -0.875 1.00 59.52 N
ATOM 24 C4 G A2004 -45.766 -80.876 -1.654 1.00 58.28 C
ATOM 25 P U A2005 -46.287 -85.722 1.806 1.00 47.97 P
ATOM 26 OP1 U A2005 -46.023 -86.849 2.715 1.00 52.84 O
ATOM 27 OP2 U A2005 -47.188 -85.879 0.634 1.00 46.90 O
ATOM 28 O5' U A2005 -46.783 -84.497 2.703 1.00 50.79 O
TER
ATOM 1 O3' G B1344 -43.885 -75.956 5.767 1.00 67.72 O
ATOM 2 P U B1345 -42.819 -77.168 5.809 1.00 49.85 P
ATOM 3 OP1 U B1345 -43.433 -78.321 6.525 1.00 37.86 O
ATOM 4 OP2 U B1345 -41.539 -76.610 6.298 1.00 54.16 O
ATOM 5 O5' U B1345 -42.652 -77.559 4.264 1.00 46.93 O
ATOM 6 C5' U B1345 -43.631 -78.377 3.666 1.00 58.10 C
ATOM 7 C4' U B1345 -42.997 -79.191 2.566 1.00 47.57 C
ATOM 8 O4' U B1345 -42.685 -78.318 1.471 1.00 43.59 O
ATOM 9 C3' U B1345 -41.684 -79.851 2.936 1.00 49.56 C
ATOM 10 O3' U B1345 -41.962 -81.122 3.543 1.00 49.82 O
ATOM 11 C2' U B1345 -41.034 -80.006 1.566 1.00 57.17 C
ATOM 12 O2' U B1345 -41.443 -81.182 0.896 1.00 54.69 O
ATOM 13 C1' U B1345 -41.532 -78.778 0.814 1.00 47.47 C
ATOM 14 N1 U B1345 -40.601 -77.633 0.817 1.00 46.42 N
ATOM 15 C2 U B1345 -39.430 -77.684 0.094 1.00 53.59 C
ATOM 16 O2 U B1345 -39.085 -78.648 -0.564 1.00 59.90 O
ATOM 17 N3 U B1345 -38.666 -76.546 0.175 1.00 62.69 N
ATOM 18 C4 U B1345 -38.948 -75.388 0.884 1.00 53.95 C
ATOM 19 O4 U B1345 -38.157 -74.447 0.859 1.00 54.83 O
ATOM 20 C5 U B1345 -40.189 -75.416 1.608 1.00 46.87 C
ATOM 21 C6 U B1345 -40.947 -76.514 1.545 1.00 50.94 C
ATOM 22 P C B1346 -40.969 -81.906 4.541 1.00 48.40 P
ATOM 23 OP1 C B1346 -41.551 -83.268 4.653 1.00 41.16 O
ATOM 24 OP2 C B1346 -40.657 -81.100 5.772 1.00 38.15 O
ATOM 25 O5' C B1346 -39.646 -82.010 3.660 1.00 51.85 O
TER
ATOM 2 P G A2004 -46.329 -87.373 -3.181 1.00 54.31 P
ATOM 3 OP1 G A2004 -46.123 -88.644 -2.432 1.00 58.84 O
ATOM 4 OP2 G A2004 -47.667 -87.029 -3.721 1.00 56.59 O
ATOM 5 O5' G A2004 -45.804 -86.155 -2.272 1.00 46.51 O
ATOM 6 C5' G A2004 -44.462 -86.214 -1.815 1.00 45.22 C
ATOM 7 C4' G A2004 -43.993 -85.011 -1.020 1.00 46.00 C
ATOM 8 O4' G A2004 -43.715 -83.886 -1.892 1.00 52.84 O
ATOM 9 C3' G A2004 -44.955 -84.469 0.021 1.00 47.45 C
ATOM 10 O3' G A2004 -44.893 -85.223 1.220 1.00 41.63 O
ATOM 11 C2' G A2004 -44.333 -83.103 0.246 1.00 54.63 C
ATOM 12 O2' G A2004 -43.177 -83.208 1.058 1.00 57.61 O
ATOM 13 C1' G A2004 -44.029 -82.692 -1.199 1.00 55.78 C
ATOM 14 N9 G A2004 -45.218 -82.129 -1.824 1.00 56.80 N
ATOM 15 C8 G A2004 -46.053 -82.779 -2.693 1.00 64.23 C
ATOM 16 N7 G A2004 -47.063 -82.057 -3.093 1.00 66.98 N
ATOM 17 C5 G A2004 -46.895 -80.850 -2.439 1.00 58.96 C
ATOM 18 C6 G A2004 -47.695 -79.690 -2.488 1.00 59.15 C
ATOM 19 O6 G A2004 -48.728 -79.514 -3.147 1.00 66.55 O
ATOM 20 N1 G A2004 -47.175 -78.688 -1.679 1.00 57.71 N
ATOM 21 C2 G A2004 -46.029 -78.803 -0.927 1.00 54.21 C
ATOM 22 N2 G A2004 -45.671 -77.735 -0.203 1.00 60.31 N
ATOM 23 N3 G A2004 -45.275 -79.889 -0.875 1.00 59.52 N
ATOM 24 C4 G A2004 -45.766 -80.876 -1.654 1.00 58.28 C
ATOM 25 P U A2005 -46.287 -85.722 1.806 1.00 47.97 P
ATOM 26 OP1 U A2005 -46.023 -86.849 2.715 1.00 52.84 O
ATOM 27 OP2 U A2005 -47.188 -85.879 0.634 1.00 46.90 O
ATOM 28 O5' U A2005 -46.783 -84.497 2.703 1.00 50.79 O
TER
ATOM 1 O3' G B1344 -43.885 -75.956 5.767 1.00 67.72 O
ATOM 2 P U B1345 -42.819 -77.168 5.809 1.00 49.85 P
ATOM 3 OP1 U B1345 -43.433 -78.321 6.525 1.00 37.86 O
ATOM 4 OP2 U B1345 -41.539 -76.610 6.298 1.00 54.16 O
ATOM 5 O5' U B1345 -42.652 -77.559 4.264 1.00 46.93 O
ATOM 6 C5' U B1345 -43.631 -78.377 3.666 1.00 58.10 C
ATOM 7 C4' U B1345 -42.997 -79.191 2.566 1.00 47.57 C
ATOM 8 O4' U B1345 -42.685 -78.318 1.471 1.00 43.59 O
ATOM 9 C3' U B1345 -41.684 -79.851 2.936 1.00 49.56 C
ATOM 10 O3' U B1345 -41.962 -81.122 3.543 1.00 49.82 O
ATOM 11 C2' U B1345 -41.034 -80.006 1.566 1.00 57.17 C
ATOM 12 O2' U B1345 -41.443 -81.182 0.896 1.00 54.69 O
ATOM 13 C1' U B1345 -41.532 -78.778 0.814 1.00 47.47 C
ATOM 14 N1 U B1345 -40.601 -77.633 0.817 1.00 46.42 N
ATOM 15 C2 U B1345 -39.430 -77.684 0.094 1.00 53.59 C
ATOM 16 O2 U B1345 -39.085 -78.648 -0.564 1.00 59.90 O
ATOM 17 N3 U B1345 -38.666 -76.546 0.175 1.00 62.69 N
ATOM 18 C4 U B1345 -38.948 -75.388 0.884 1.00 53.95 C
ATOM 19 O4 U B1345 -38.157 -74.447 0.859 1.00 54.83 O
ATOM 20 C5 U B1345 -40.189 -75.416 1.608 1.00 46.87 C
ATOM 21 C6 U B1345 -40.947 -76.514 1.545 1.00 50.94 C
ATOM 22 P C B1346 -40.969 -81.906 4.541 1.00 48.40 P
ATOM 23 OP1 C B1346 -41.551 -83.268 4.653 1.00 41.16 O
ATOM 24 OP2 C B1346 -40.657 -81.100 5.772 1.00 38.15 O
ATOM 25 O5' C B1346 -39.646 -82.010 3.660 1.00 51.85 O
TER
Atoms:
OP1: (-46.123,-88.644,-2.432)
OP2: (-47.667,-87.029,-3.721)
C3': (-44.955,-84.469,0.021)
C1': (-44.029,-82.692,-1.199)
C5': (-44.462,-86.214,-1.815)
O6: (-48.728,-79.514,-3.147)
O4': (-43.715,-83.886,-1.892)
C8: (-46.053,-82.779,-2.693)
C2: (-46.029,-78.803,-0.927)
C6: (-47.695,-79.690,-2.488)
C5: (-46.895,-80.850,-2.439)
C4: (-45.766,-80.876,-1.654)
P: (-46.329,-87.373,-3.181)
C4': (-43.993,-85.011,-1.020)
C2': (-44.333,-83.103,0.246)
O2': (-43.177,-83.208,1.058)
N1: (-47.175,-78.688,-1.679)
N2: (-45.671,-77.735,-0.203)
N3: (-45.275,-79.889,-0.875)
N7: (-47.063,-82.057,-3.093)
N9: (-45.218,-82.129,-1.824)
O5': (-45.804,-86.155,-2.272)
O3': (-44.893,-85.223,1.220)
OP2: (-47.667,-87.029,-3.721)
C3': (-44.955,-84.469,0.021)
C1': (-44.029,-82.692,-1.199)
C5': (-44.462,-86.214,-1.815)
O6: (-48.728,-79.514,-3.147)
O4': (-43.715,-83.886,-1.892)
C8: (-46.053,-82.779,-2.693)
C2: (-46.029,-78.803,-0.927)
C6: (-47.695,-79.690,-2.488)
C5: (-46.895,-80.850,-2.439)
C4: (-45.766,-80.876,-1.654)
P: (-46.329,-87.373,-3.181)
C4': (-43.993,-85.011,-1.020)
C2': (-44.333,-83.103,0.246)
O2': (-43.177,-83.208,1.058)
N1: (-47.175,-78.688,-1.679)
N2: (-45.671,-77.735,-0.203)
N3: (-45.275,-79.889,-0.875)
N7: (-47.063,-82.057,-3.093)
N9: (-45.218,-82.129,-1.824)
O5': (-45.804,-86.155,-2.272)
O3': (-44.893,-85.223,1.220)
C4: (-38.948,-75.388,0.884)
N3: (-38.666,-76.546,0.175)
OP1: (-43.433,-78.321,6.525)
OP2: (-41.539,-76.610,6.298)
C2: (-39.430,-77.684,0.094)
C1': (-41.532,-78.778,0.814)
C3': (-41.684,-79.851,2.936)
O5': (-42.652,-77.559,4.264)
O4': (-42.685,-78.318,1.471)
C5': (-43.631,-78.377,3.666)
P: (-42.819,-77.168,5.809)
C4': (-42.997,-79.191,2.566)
C2': (-41.034,-80.006,1.566)
O2': (-41.443,-81.182,0.896)
N1: (-40.601,-77.633,0.817)
O4: (-38.157,-74.447,0.859)
O2: (-39.085,-78.648,-0.564)
C6: (-40.947,-76.514,1.545)
C5: (-40.189,-75.416,1.608)
O3': (-41.962,-81.122,3.543)
N3: (-38.666,-76.546,0.175)
OP1: (-43.433,-78.321,6.525)
OP2: (-41.539,-76.610,6.298)
C2: (-39.430,-77.684,0.094)
C1': (-41.532,-78.778,0.814)
C3': (-41.684,-79.851,2.936)
O5': (-42.652,-77.559,4.264)
O4': (-42.685,-78.318,1.471)
C5': (-43.631,-78.377,3.666)
P: (-42.819,-77.168,5.809)
C4': (-42.997,-79.191,2.566)
C2': (-41.034,-80.006,1.566)
O2': (-41.443,-81.182,0.896)
N1: (-40.601,-77.633,0.817)
O4: (-38.157,-74.447,0.859)
O2: (-39.085,-78.648,-0.564)
C6: (-40.947,-76.514,1.545)
C5: (-40.189,-75.416,1.608)
O3': (-41.962,-81.122,3.543)
Image (generated by PyMOL):