Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01278:0505
Extra
PDB:
ATOM 1 O3' A A1277 19.336 128.587 61.482 1.00 30.25 O
ATOM 2 P G A1278 19.258 128.505 63.085 1.00 31.89 P
ATOM 3 OP1 G A1278 19.882 127.224 63.466 1.00 29.70 O
ATOM 4 OP2 G A1278 17.874 128.808 63.526 1.00 30.48 O
ATOM 5 O5' G A1278 20.188 129.699 63.575 1.00 32.69 O
ATOM 6 C5' G A1278 21.588 129.736 63.245 1.00 30.79 C
ATOM 7 C4' G A1278 22.174 131.067 63.642 1.00 30.06 C
ATOM 8 O4' G A1278 21.543 132.127 62.870 1.00 31.46 O
ATOM 9 C3' G A1278 21.932 131.473 65.084 1.00 28.41 C
ATOM 10 O3' G A1278 22.880 130.880 65.953 1.00 30.23 O
ATOM 11 C2' G A1278 22.094 132.980 65.014 1.00 29.96 C
ATOM 12 O2' G A1278 23.457 133.341 64.947 1.00 30.34 O
ATOM 13 C1' G A1278 21.411 133.292 63.676 1.00 29.80 C
ATOM 14 N9 G A1278 19.987 133.574 63.836 1.00 29.06 N
ATOM 15 C8 G A1278 18.956 132.692 63.632 1.00 29.46 C
ATOM 16 N7 G A1278 17.784 133.199 63.901 1.00 28.77 N
ATOM 17 C5 G A1278 18.052 134.500 64.296 1.00 28.85 C
ATOM 18 C6 G A1278 17.170 135.528 64.718 1.00 28.77 C
ATOM 19 O6 G A1278 15.939 135.487 64.835 1.00 28.43 O
ATOM 20 N1 G A1278 17.855 136.694 65.025 1.00 26.67 N
ATOM 21 C2 G A1278 19.209 136.860 64.939 1.00 27.45 C
ATOM 22 N2 G A1278 19.664 138.080 65.277 1.00 26.74 N
ATOM 23 N3 G A1278 20.052 135.907 64.550 1.00 27.96 N
ATOM 24 C4 G A1278 19.407 134.759 64.248 1.00 29.30 C
ATOM 25 P C A1279 22.435 130.397 67.424 1.00 31.73 P
ATOM 26 OP1 C A1279 23.627 129.714 67.985 1.00 32.41 O
ATOM 27 OP2 C A1279 21.143 129.668 67.339 1.00 30.11 O
ATOM 28 O5' C A1279 22.202 131.739 68.249 1.00 29.70 O
TER
ATOM 1 O3' A B 504 22.832 145.446 61.119 1.00 32.42 O
ATOM 2 P U B 505 22.931 145.320 62.718 1.00 35.56 P
ATOM 3 OP1 U B 505 21.785 146.039 63.325 1.00 34.94 O
ATOM 4 OP2 U B 505 24.311 145.684 63.126 1.00 38.10 O
ATOM 5 O5' U B 505 22.739 143.763 62.986 1.00 32.15 O
ATOM 6 C5' U B 505 21.556 143.068 62.548 1.00 29.10 C
ATOM 7 C4' U B 505 21.761 141.581 62.693 1.00 29.86 C
ATOM 8 O4' U B 505 22.867 141.166 61.844 1.00 29.54 O
ATOM 9 C3' U B 505 22.144 141.139 64.100 1.00 28.75 C
ATOM 10 O3' U B 505 20.964 140.848 64.837 1.00 29.02 O
ATOM 11 C2' U B 505 22.946 139.867 63.850 1.00 27.98 C
ATOM 12 O2' U B 505 22.110 138.746 63.690 1.00 28.04 O
ATOM 13 C1' U B 505 23.630 140.177 62.510 1.00 28.35 C
ATOM 14 N1 U B 505 25.036 140.620 62.570 1.00 30.66 N
ATOM 15 C2 U B 505 26.020 139.646 62.744 1.00 30.63 C
ATOM 16 O2 U B 505 25.770 138.463 62.894 1.00 30.13 O
ATOM 17 N3 U B 505 27.309 140.115 62.743 1.00 30.42 N
ATOM 18 C4 U B 505 27.720 141.419 62.597 1.00 32.91 C
ATOM 19 O4 U B 505 28.931 141.675 62.601 1.00 33.93 O
ATOM 20 C5 U B 505 26.654 142.371 62.443 1.00 30.91 C
ATOM 21 C6 U B 505 25.383 141.951 62.438 1.00 30.61 C
ATOM 22 P G B 506 20.675 141.581 66.235 1.00 30.69 P
ATOM 23 OP1 G B 506 19.534 140.864 66.859 1.00 29.38 O
ATOM 24 OP2 G B 506 20.591 143.044 66.031 1.00 33.11 O
ATOM 25 O5' G B 506 21.980 141.292 67.093 1.00 32.07 O
TER
ATOM 2 P G A1278 19.258 128.505 63.085 1.00 31.89 P
ATOM 3 OP1 G A1278 19.882 127.224 63.466 1.00 29.70 O
ATOM 4 OP2 G A1278 17.874 128.808 63.526 1.00 30.48 O
ATOM 5 O5' G A1278 20.188 129.699 63.575 1.00 32.69 O
ATOM 6 C5' G A1278 21.588 129.736 63.245 1.00 30.79 C
ATOM 7 C4' G A1278 22.174 131.067 63.642 1.00 30.06 C
ATOM 8 O4' G A1278 21.543 132.127 62.870 1.00 31.46 O
ATOM 9 C3' G A1278 21.932 131.473 65.084 1.00 28.41 C
ATOM 10 O3' G A1278 22.880 130.880 65.953 1.00 30.23 O
ATOM 11 C2' G A1278 22.094 132.980 65.014 1.00 29.96 C
ATOM 12 O2' G A1278 23.457 133.341 64.947 1.00 30.34 O
ATOM 13 C1' G A1278 21.411 133.292 63.676 1.00 29.80 C
ATOM 14 N9 G A1278 19.987 133.574 63.836 1.00 29.06 N
ATOM 15 C8 G A1278 18.956 132.692 63.632 1.00 29.46 C
ATOM 16 N7 G A1278 17.784 133.199 63.901 1.00 28.77 N
ATOM 17 C5 G A1278 18.052 134.500 64.296 1.00 28.85 C
ATOM 18 C6 G A1278 17.170 135.528 64.718 1.00 28.77 C
ATOM 19 O6 G A1278 15.939 135.487 64.835 1.00 28.43 O
ATOM 20 N1 G A1278 17.855 136.694 65.025 1.00 26.67 N
ATOM 21 C2 G A1278 19.209 136.860 64.939 1.00 27.45 C
ATOM 22 N2 G A1278 19.664 138.080 65.277 1.00 26.74 N
ATOM 23 N3 G A1278 20.052 135.907 64.550 1.00 27.96 N
ATOM 24 C4 G A1278 19.407 134.759 64.248 1.00 29.30 C
ATOM 25 P C A1279 22.435 130.397 67.424 1.00 31.73 P
ATOM 26 OP1 C A1279 23.627 129.714 67.985 1.00 32.41 O
ATOM 27 OP2 C A1279 21.143 129.668 67.339 1.00 30.11 O
ATOM 28 O5' C A1279 22.202 131.739 68.249 1.00 29.70 O
TER
ATOM 1 O3' A B 504 22.832 145.446 61.119 1.00 32.42 O
ATOM 2 P U B 505 22.931 145.320 62.718 1.00 35.56 P
ATOM 3 OP1 U B 505 21.785 146.039 63.325 1.00 34.94 O
ATOM 4 OP2 U B 505 24.311 145.684 63.126 1.00 38.10 O
ATOM 5 O5' U B 505 22.739 143.763 62.986 1.00 32.15 O
ATOM 6 C5' U B 505 21.556 143.068 62.548 1.00 29.10 C
ATOM 7 C4' U B 505 21.761 141.581 62.693 1.00 29.86 C
ATOM 8 O4' U B 505 22.867 141.166 61.844 1.00 29.54 O
ATOM 9 C3' U B 505 22.144 141.139 64.100 1.00 28.75 C
ATOM 10 O3' U B 505 20.964 140.848 64.837 1.00 29.02 O
ATOM 11 C2' U B 505 22.946 139.867 63.850 1.00 27.98 C
ATOM 12 O2' U B 505 22.110 138.746 63.690 1.00 28.04 O
ATOM 13 C1' U B 505 23.630 140.177 62.510 1.00 28.35 C
ATOM 14 N1 U B 505 25.036 140.620 62.570 1.00 30.66 N
ATOM 15 C2 U B 505 26.020 139.646 62.744 1.00 30.63 C
ATOM 16 O2 U B 505 25.770 138.463 62.894 1.00 30.13 O
ATOM 17 N3 U B 505 27.309 140.115 62.743 1.00 30.42 N
ATOM 18 C4 U B 505 27.720 141.419 62.597 1.00 32.91 C
ATOM 19 O4 U B 505 28.931 141.675 62.601 1.00 33.93 O
ATOM 20 C5 U B 505 26.654 142.371 62.443 1.00 30.91 C
ATOM 21 C6 U B 505 25.383 141.951 62.438 1.00 30.61 C
ATOM 22 P G B 506 20.675 141.581 66.235 1.00 30.69 P
ATOM 23 OP1 G B 506 19.534 140.864 66.859 1.00 29.38 O
ATOM 24 OP2 G B 506 20.591 143.044 66.031 1.00 33.11 O
ATOM 25 O5' G B 506 21.980 141.292 67.093 1.00 32.07 O
TER
Atoms:
OP1: (19.882,127.224,63.466)
OP2: (17.874,128.808,63.526)
C3': (21.932,131.473,65.084)
C1': (21.411,133.292,63.676)
C5': (21.588,129.736,63.245)
O6: (15.939,135.487,64.835)
O4': (21.543,132.127,62.870)
C8: (18.956,132.692,63.632)
C2: (19.209,136.860,64.939)
C6: (17.170,135.528,64.718)
C5: (18.052,134.500,64.296)
C4: (19.407,134.759,64.248)
P: (19.258,128.505,63.085)
C4': (22.174,131.067,63.642)
C2': (22.094,132.980,65.014)
O2': (23.457,133.341,64.947)
N1: (17.855,136.694,65.025)
N2: (19.664,138.080,65.277)
N3: (20.052,135.907,64.550)
N7: (17.784,133.199,63.901)
N9: (19.987,133.574,63.836)
O5': (20.188,129.699,63.575)
O3': (22.880,130.880,65.953)
OP2: (17.874,128.808,63.526)
C3': (21.932,131.473,65.084)
C1': (21.411,133.292,63.676)
C5': (21.588,129.736,63.245)
O6: (15.939,135.487,64.835)
O4': (21.543,132.127,62.870)
C8: (18.956,132.692,63.632)
C2: (19.209,136.860,64.939)
C6: (17.170,135.528,64.718)
C5: (18.052,134.500,64.296)
C4: (19.407,134.759,64.248)
P: (19.258,128.505,63.085)
C4': (22.174,131.067,63.642)
C2': (22.094,132.980,65.014)
O2': (23.457,133.341,64.947)
N1: (17.855,136.694,65.025)
N2: (19.664,138.080,65.277)
N3: (20.052,135.907,64.550)
N7: (17.784,133.199,63.901)
N9: (19.987,133.574,63.836)
O5': (20.188,129.699,63.575)
O3': (22.880,130.880,65.953)
C4: (27.720,141.419,62.597)
N3: (27.309,140.115,62.743)
OP1: (21.785,146.039,63.325)
OP2: (24.311,145.684,63.126)
C2: (26.020,139.646,62.744)
C1': (23.630,140.177,62.510)
C3': (22.144,141.139,64.100)
O5': (22.739,143.763,62.986)
O4': (22.867,141.166,61.844)
C5': (21.556,143.068,62.548)
P: (22.931,145.320,62.718)
C4': (21.761,141.581,62.693)
C2': (22.946,139.867,63.850)
O2': (22.110,138.746,63.690)
N1: (25.036,140.620,62.570)
O4: (28.931,141.675,62.601)
O2: (25.770,138.463,62.894)
C6: (25.383,141.951,62.438)
C5: (26.654,142.371,62.443)
O3': (20.964,140.848,64.837)
N3: (27.309,140.115,62.743)
OP1: (21.785,146.039,63.325)
OP2: (24.311,145.684,63.126)
C2: (26.020,139.646,62.744)
C1': (23.630,140.177,62.510)
C3': (22.144,141.139,64.100)
O5': (22.739,143.763,62.986)
O4': (22.867,141.166,61.844)
C5': (21.556,143.068,62.548)
P: (22.931,145.320,62.718)
C4': (21.761,141.581,62.693)
C2': (22.946,139.867,63.850)
O2': (22.110,138.746,63.690)
N1: (25.036,140.620,62.570)
O4: (28.931,141.675,62.601)
O2: (25.770,138.463,62.894)
C6: (25.383,141.951,62.438)
C5: (26.654,142.371,62.443)
O3': (20.964,140.848,64.837)
Image (generated by PyMOL):