Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PJP:B11:B12
Extra
PDB:
ATOM 1 O3' G A 10 -0.867 -0.071 27.693 1.00 17.39 O
ATOM 2 P G A 11 0.016 -0.112 28.990 1.00 19.40 P
ATOM 3 OP1 G A 11 -0.894 0.042 30.138 1.00 19.25 O
ATOM 4 OP2 G A 11 1.189 0.762 28.897 1.00 22.28 O
ATOM 5 O5' G A 11 0.647 -1.598 28.873 1.00 24.26 O
ATOM 6 C5' G A 11 0.123 -2.749 29.512 1.00 23.20 C
ATOM 7 C4' G A 11 0.758 -3.940 28.830 1.00 22.40 C
ATOM 8 O4' G A 11 2.167 -3.685 28.971 1.00 23.69 O
ATOM 9 C3' G A 11 0.547 -5.318 29.473 1.00 20.84 C
ATOM 10 O3' G A 11 0.733 -6.349 28.511 1.00 20.59 O
ATOM 11 C2' G A 11 1.597 -5.308 30.578 1.00 24.28 C
ATOM 12 O2' G A 11 1.835 -6.552 31.232 1.00 24.23 O
ATOM 13 C1' G A 11 2.774 -4.703 29.775 1.00 22.21 C
ATOM 14 N9 G A 11 3.894 -4.137 30.552 1.00 20.22 N
ATOM 15 C8 G A 11 3.897 -3.075 31.400 1.00 20.05 C
ATOM 16 N7 G A 11 5.053 -2.855 31.920 1.00 21.50 N
ATOM 17 C5 G A 11 5.897 -3.795 31.406 1.00 17.93 C
ATOM 18 C6 G A 11 7.274 -4.065 31.607 1.00 17.73 C
ATOM 19 O6 G A 11 8.060 -3.496 32.313 1.00 19.72 O
ATOM 20 N1 G A 11 7.728 -5.180 30.896 1.00 17.97 N
ATOM 21 C2 G A 11 6.933 -5.905 30.036 1.00 14.61 C
ATOM 22 N2 G A 11 7.485 -6.912 29.410 1.00 20.05 N
ATOM 23 N3 G A 11 5.661 -5.685 29.818 1.00 16.65 N
ATOM 24 C4 G A 11 5.187 -4.621 30.550 1.00 20.89 C
ATOM 25 P U A 12 0.221 -7.881 28.683 1.00 22.29 P
ATOM 26 OP1 U A 12 -1.123 -7.909 28.105 1.00 20.36 O
ATOM 27 OP2 U A 12 0.447 -8.203 30.122 1.00 18.89 O
ATOM 28 O5' U A 12 1.296 -8.600 27.746 1.00 24.00 O
TER
ATOM 1 O3' G B 11 0.733 -6.349 28.511 1.00 20.59 O
ATOM 2 P U B 12 0.221 -7.881 28.683 1.00 22.29 P
ATOM 3 OP1 U B 12 -1.123 -7.909 28.105 1.00 20.36 O
ATOM 4 OP2 U B 12 0.447 -8.203 30.122 1.00 18.89 O
ATOM 5 O5' U B 12 1.296 -8.600 27.746 1.00 24.00 O
ATOM 6 C5' U B 12 1.063 -9.647 26.720 1.00 21.45 C
ATOM 7 C4' U B 12 2.445 -10.174 26.462 1.00 23.97 C
ATOM 8 O4' U B 12 3.200 -9.118 25.792 1.00 24.71 O
ATOM 9 C3' U B 12 3.366 -10.573 27.624 1.00 26.50 C
ATOM 10 O3' U B 12 4.283 -11.641 27.151 1.00 31.26 O
ATOM 11 C2' U B 12 4.112 -9.271 27.837 1.00 23.50 C
ATOM 12 O2' U B 12 5.302 -9.327 28.586 1.00 24.04 O
ATOM 13 C1' U B 12 4.433 -8.853 26.400 1.00 20.93 C
ATOM 14 N1 U B 12 4.699 -7.401 26.392 1.00 19.00 N
ATOM 15 C2 U B 12 6.026 -6.922 26.281 1.00 18.42 C
ATOM 16 O2 U B 12 7.019 -7.642 26.142 1.00 18.75 O
ATOM 17 N3 U B 12 6.164 -5.544 26.385 1.00 15.14 N
ATOM 18 C4 U B 12 5.099 -4.654 26.451 1.00 14.38 C
ATOM 19 O4 U B 12 5.385 -3.475 26.587 1.00 21.38 O
ATOM 20 C5 U B 12 3.773 -5.211 26.591 1.00 16.78 C
ATOM 21 C6 U B 12 3.594 -6.547 26.550 1.00 14.86 C
ATOM 22 P C B 13 3.941 -13.216 27.273 1.00 30.63 P
ATOM 23 OP1 C B 13 2.941 -13.479 28.302 1.00 30.23 O
ATOM 24 OP2 C B 13 5.259 -13.698 27.560 1.00 30.14 O
ATOM 25 O5' C B 13 3.682 -13.805 25.782 1.00 30.13 O
TER
ATOM 2 P G A 11 0.016 -0.112 28.990 1.00 19.40 P
ATOM 3 OP1 G A 11 -0.894 0.042 30.138 1.00 19.25 O
ATOM 4 OP2 G A 11 1.189 0.762 28.897 1.00 22.28 O
ATOM 5 O5' G A 11 0.647 -1.598 28.873 1.00 24.26 O
ATOM 6 C5' G A 11 0.123 -2.749 29.512 1.00 23.20 C
ATOM 7 C4' G A 11 0.758 -3.940 28.830 1.00 22.40 C
ATOM 8 O4' G A 11 2.167 -3.685 28.971 1.00 23.69 O
ATOM 9 C3' G A 11 0.547 -5.318 29.473 1.00 20.84 C
ATOM 10 O3' G A 11 0.733 -6.349 28.511 1.00 20.59 O
ATOM 11 C2' G A 11 1.597 -5.308 30.578 1.00 24.28 C
ATOM 12 O2' G A 11 1.835 -6.552 31.232 1.00 24.23 O
ATOM 13 C1' G A 11 2.774 -4.703 29.775 1.00 22.21 C
ATOM 14 N9 G A 11 3.894 -4.137 30.552 1.00 20.22 N
ATOM 15 C8 G A 11 3.897 -3.075 31.400 1.00 20.05 C
ATOM 16 N7 G A 11 5.053 -2.855 31.920 1.00 21.50 N
ATOM 17 C5 G A 11 5.897 -3.795 31.406 1.00 17.93 C
ATOM 18 C6 G A 11 7.274 -4.065 31.607 1.00 17.73 C
ATOM 19 O6 G A 11 8.060 -3.496 32.313 1.00 19.72 O
ATOM 20 N1 G A 11 7.728 -5.180 30.896 1.00 17.97 N
ATOM 21 C2 G A 11 6.933 -5.905 30.036 1.00 14.61 C
ATOM 22 N2 G A 11 7.485 -6.912 29.410 1.00 20.05 N
ATOM 23 N3 G A 11 5.661 -5.685 29.818 1.00 16.65 N
ATOM 24 C4 G A 11 5.187 -4.621 30.550 1.00 20.89 C
ATOM 25 P U A 12 0.221 -7.881 28.683 1.00 22.29 P
ATOM 26 OP1 U A 12 -1.123 -7.909 28.105 1.00 20.36 O
ATOM 27 OP2 U A 12 0.447 -8.203 30.122 1.00 18.89 O
ATOM 28 O5' U A 12 1.296 -8.600 27.746 1.00 24.00 O
TER
ATOM 1 O3' G B 11 0.733 -6.349 28.511 1.00 20.59 O
ATOM 2 P U B 12 0.221 -7.881 28.683 1.00 22.29 P
ATOM 3 OP1 U B 12 -1.123 -7.909 28.105 1.00 20.36 O
ATOM 4 OP2 U B 12 0.447 -8.203 30.122 1.00 18.89 O
ATOM 5 O5' U B 12 1.296 -8.600 27.746 1.00 24.00 O
ATOM 6 C5' U B 12 1.063 -9.647 26.720 1.00 21.45 C
ATOM 7 C4' U B 12 2.445 -10.174 26.462 1.00 23.97 C
ATOM 8 O4' U B 12 3.200 -9.118 25.792 1.00 24.71 O
ATOM 9 C3' U B 12 3.366 -10.573 27.624 1.00 26.50 C
ATOM 10 O3' U B 12 4.283 -11.641 27.151 1.00 31.26 O
ATOM 11 C2' U B 12 4.112 -9.271 27.837 1.00 23.50 C
ATOM 12 O2' U B 12 5.302 -9.327 28.586 1.00 24.04 O
ATOM 13 C1' U B 12 4.433 -8.853 26.400 1.00 20.93 C
ATOM 14 N1 U B 12 4.699 -7.401 26.392 1.00 19.00 N
ATOM 15 C2 U B 12 6.026 -6.922 26.281 1.00 18.42 C
ATOM 16 O2 U B 12 7.019 -7.642 26.142 1.00 18.75 O
ATOM 17 N3 U B 12 6.164 -5.544 26.385 1.00 15.14 N
ATOM 18 C4 U B 12 5.099 -4.654 26.451 1.00 14.38 C
ATOM 19 O4 U B 12 5.385 -3.475 26.587 1.00 21.38 O
ATOM 20 C5 U B 12 3.773 -5.211 26.591 1.00 16.78 C
ATOM 21 C6 U B 12 3.594 -6.547 26.550 1.00 14.86 C
ATOM 22 P C B 13 3.941 -13.216 27.273 1.00 30.63 P
ATOM 23 OP1 C B 13 2.941 -13.479 28.302 1.00 30.23 O
ATOM 24 OP2 C B 13 5.259 -13.698 27.560 1.00 30.14 O
ATOM 25 O5' C B 13 3.682 -13.805 25.782 1.00 30.13 O
TER
Atoms:
OP1: (-0.894,0.042,30.138)
OP2: (1.189,0.762,28.897)
C3': (0.547,-5.318,29.473)
C1': (2.774,-4.703,29.775)
C5': (0.123,-2.749,29.512)
O6: (8.060,-3.496,32.313)
O4': (2.167,-3.685,28.971)
C8: (3.897,-3.075,31.400)
C2: (6.933,-5.905,30.036)
C6: (7.274,-4.065,31.607)
C5: (5.897,-3.795,31.406)
C4: (5.187,-4.621,30.550)
P: (0.016,-0.112,28.990)
C4': (0.758,-3.940,28.830)
C2': (1.597,-5.308,30.578)
O2': (1.835,-6.552,31.232)
N1: (7.728,-5.180,30.896)
N2: (7.485,-6.912,29.410)
N3: (5.661,-5.685,29.818)
N7: (5.053,-2.855,31.920)
N9: (3.894,-4.137,30.552)
O5': (0.647,-1.598,28.873)
O3': (0.733,-6.349,28.511)
OP2: (1.189,0.762,28.897)
C3': (0.547,-5.318,29.473)
C1': (2.774,-4.703,29.775)
C5': (0.123,-2.749,29.512)
O6: (8.060,-3.496,32.313)
O4': (2.167,-3.685,28.971)
C8: (3.897,-3.075,31.400)
C2: (6.933,-5.905,30.036)
C6: (7.274,-4.065,31.607)
C5: (5.897,-3.795,31.406)
C4: (5.187,-4.621,30.550)
P: (0.016,-0.112,28.990)
C4': (0.758,-3.940,28.830)
C2': (1.597,-5.308,30.578)
O2': (1.835,-6.552,31.232)
N1: (7.728,-5.180,30.896)
N2: (7.485,-6.912,29.410)
N3: (5.661,-5.685,29.818)
N7: (5.053,-2.855,31.920)
N9: (3.894,-4.137,30.552)
O5': (0.647,-1.598,28.873)
O3': (0.733,-6.349,28.511)
C4: (5.099,-4.654,26.451)
N3: (6.164,-5.544,26.385)
OP1: (-1.123,-7.909,28.105)
OP2: (0.447,-8.203,30.122)
C2: (6.026,-6.922,26.281)
C1': (4.433,-8.853,26.400)
C3': (3.366,-10.573,27.624)
O5': (1.296,-8.600,27.746)
O4': (3.200,-9.118,25.792)
C5': (1.063,-9.647,26.720)
P: (0.221,-7.881,28.683)
C4': (2.445,-10.174,26.462)
C2': (4.112,-9.271,27.837)
O2': (5.302,-9.327,28.586)
N1: (4.699,-7.401,26.392)
O4: (5.385,-3.475,26.587)
O2: (7.019,-7.642,26.142)
C6: (3.594,-6.547,26.550)
C5: (3.773,-5.211,26.591)
O3': (4.283,-11.641,27.151)
N3: (6.164,-5.544,26.385)
OP1: (-1.123,-7.909,28.105)
OP2: (0.447,-8.203,30.122)
C2: (6.026,-6.922,26.281)
C1': (4.433,-8.853,26.400)
C3': (3.366,-10.573,27.624)
O5': (1.296,-8.600,27.746)
O4': (3.200,-9.118,25.792)
C5': (1.063,-9.647,26.720)
P: (0.221,-7.881,28.683)
C4': (2.445,-10.174,26.462)
C2': (4.112,-9.271,27.837)
O2': (5.302,-9.327,28.586)
N1: (4.699,-7.401,26.392)
O4: (5.385,-3.475,26.587)
O2: (7.019,-7.642,26.142)
C6: (3.594,-6.547,26.550)
C5: (3.773,-5.211,26.591)
O3': (4.283,-11.641,27.151)
Image (generated by PyMOL):