Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:061:058
Extra
PDB:
ATOM 1 O3' A A 60 47.168 158.301 32.129 1.00 58.36 O
ATOM 2 P G A 61 46.668 158.500 30.617 1.00 61.29 P
ATOM 3 OP1 G A 61 45.997 159.831 30.511 1.00 60.20 O
ATOM 4 OP2 G A 61 45.931 157.264 30.214 1.00 60.83 O
ATOM 5 O5' G A 61 48.036 158.555 29.809 1.00 59.91 O
ATOM 6 C5' G A 61 48.104 159.100 28.492 1.00 58.16 C
ATOM 7 C4' G A 61 49.302 160.001 28.386 1.00 57.62 C
ATOM 8 O4' G A 61 50.401 159.430 29.142 1.00 55.79 O
ATOM 9 C3' G A 61 49.840 160.196 26.979 1.00 58.16 C
ATOM 10 O3' G A 61 49.116 161.229 26.294 1.00 59.10 O
ATOM 11 C2' G A 61 51.303 160.529 27.253 1.00 56.68 C
ATOM 12 O2' G A 61 51.456 161.854 27.725 1.00 58.90 O
ATOM 13 C1' G A 61 51.608 159.590 28.424 1.00 53.70 C
ATOM 14 N9 G A 61 52.074 158.257 28.053 1.00 50.45 N
ATOM 15 C8 G A 61 51.412 157.071 28.264 1.00 48.61 C
ATOM 16 N7 G A 61 52.075 156.031 27.841 1.00 47.50 N
ATOM 17 C5 G A 61 53.244 156.559 27.315 1.00 49.00 C
ATOM 18 C6 G A 61 54.352 155.913 26.712 1.00 49.65 C
ATOM 19 O6 G A 61 54.522 154.707 26.506 1.00 52.48 O
ATOM 20 N1 G A 61 55.328 156.820 26.332 1.00 49.54 N
ATOM 21 C2 G A 61 55.252 158.178 26.504 1.00 50.66 C
ATOM 22 N2 G A 61 56.309 158.887 26.075 1.00 50.11 N
ATOM 23 N3 G A 61 54.221 158.797 27.057 1.00 50.90 N
ATOM 24 C4 G A 61 53.260 157.932 27.438 1.00 49.64 C
ATOM 25 P C A 62 48.614 160.992 24.776 1.00 59.53 P
ATOM 26 OP1 C A 62 47.744 162.143 24.428 1.00 58.54 O
ATOM 27 OP2 C A 62 48.092 159.609 24.612 1.00 58.16 O
ATOM 28 O5' C A 62 49.949 161.105 23.918 1.00 58.58 O
TER
ATOM 1 O3' A B 57 62.017 165.376 28.086 1.00 53.28 O
ATOM 2 P U B 58 61.971 165.515 26.484 1.00 51.44 P
ATOM 3 OP1 U B 58 62.918 164.538 25.874 1.00 49.02 O
ATOM 4 OP2 U B 58 62.119 166.961 26.187 1.00 52.23 O
ATOM 5 O5' U B 58 60.473 165.115 26.119 1.00 51.14 O
ATOM 6 C5' U B 58 59.396 166.048 26.319 1.00 49.66 C
ATOM 7 C4' U B 58 58.072 165.392 26.014 1.00 50.20 C
ATOM 8 O4' U B 58 58.097 164.874 24.656 1.00 51.03 O
ATOM 9 C3' U B 58 57.692 164.205 26.894 1.00 50.53 C
ATOM 10 O3' U B 58 56.264 164.147 26.937 1.00 50.73 O
ATOM 11 C2' U B 58 58.209 163.031 26.075 1.00 50.24 C
ATOM 12 O2' U B 58 57.590 161.808 26.402 1.00 52.17 O
ATOM 13 C1' U B 58 57.811 163.493 24.678 1.00 51.20 C
ATOM 14 N1 U B 58 58.474 162.846 23.537 1.00 51.59 N
ATOM 15 C2 U B 58 57.706 161.996 22.750 1.00 51.34 C
ATOM 16 O2 U B 58 56.535 161.746 22.988 1.00 50.78 O
ATOM 17 N3 U B 58 58.363 161.445 21.679 1.00 51.72 N
ATOM 18 C4 U B 58 59.683 161.637 21.327 1.00 53.21 C
ATOM 19 O4 U B 58 60.140 161.034 20.359 1.00 54.12 O
ATOM 20 C5 U B 58 60.413 162.517 22.192 1.00 53.31 C
ATOM 21 C6 U B 58 59.800 163.077 23.242 1.00 52.35 C
ATOM 22 P A B 59 55.479 164.503 28.294 1.00 52.09 P
ATOM 23 OP1 A B 59 54.164 165.086 27.938 1.00 52.54 O
ATOM 24 OP2 A B 59 56.398 165.270 29.187 1.00 51.12 O
ATOM 25 O5' A B 59 55.182 163.069 28.922 1.00 51.39 O
TER
ATOM 2 P G A 61 46.668 158.500 30.617 1.00 61.29 P
ATOM 3 OP1 G A 61 45.997 159.831 30.511 1.00 60.20 O
ATOM 4 OP2 G A 61 45.931 157.264 30.214 1.00 60.83 O
ATOM 5 O5' G A 61 48.036 158.555 29.809 1.00 59.91 O
ATOM 6 C5' G A 61 48.104 159.100 28.492 1.00 58.16 C
ATOM 7 C4' G A 61 49.302 160.001 28.386 1.00 57.62 C
ATOM 8 O4' G A 61 50.401 159.430 29.142 1.00 55.79 O
ATOM 9 C3' G A 61 49.840 160.196 26.979 1.00 58.16 C
ATOM 10 O3' G A 61 49.116 161.229 26.294 1.00 59.10 O
ATOM 11 C2' G A 61 51.303 160.529 27.253 1.00 56.68 C
ATOM 12 O2' G A 61 51.456 161.854 27.725 1.00 58.90 O
ATOM 13 C1' G A 61 51.608 159.590 28.424 1.00 53.70 C
ATOM 14 N9 G A 61 52.074 158.257 28.053 1.00 50.45 N
ATOM 15 C8 G A 61 51.412 157.071 28.264 1.00 48.61 C
ATOM 16 N7 G A 61 52.075 156.031 27.841 1.00 47.50 N
ATOM 17 C5 G A 61 53.244 156.559 27.315 1.00 49.00 C
ATOM 18 C6 G A 61 54.352 155.913 26.712 1.00 49.65 C
ATOM 19 O6 G A 61 54.522 154.707 26.506 1.00 52.48 O
ATOM 20 N1 G A 61 55.328 156.820 26.332 1.00 49.54 N
ATOM 21 C2 G A 61 55.252 158.178 26.504 1.00 50.66 C
ATOM 22 N2 G A 61 56.309 158.887 26.075 1.00 50.11 N
ATOM 23 N3 G A 61 54.221 158.797 27.057 1.00 50.90 N
ATOM 24 C4 G A 61 53.260 157.932 27.438 1.00 49.64 C
ATOM 25 P C A 62 48.614 160.992 24.776 1.00 59.53 P
ATOM 26 OP1 C A 62 47.744 162.143 24.428 1.00 58.54 O
ATOM 27 OP2 C A 62 48.092 159.609 24.612 1.00 58.16 O
ATOM 28 O5' C A 62 49.949 161.105 23.918 1.00 58.58 O
TER
ATOM 1 O3' A B 57 62.017 165.376 28.086 1.00 53.28 O
ATOM 2 P U B 58 61.971 165.515 26.484 1.00 51.44 P
ATOM 3 OP1 U B 58 62.918 164.538 25.874 1.00 49.02 O
ATOM 4 OP2 U B 58 62.119 166.961 26.187 1.00 52.23 O
ATOM 5 O5' U B 58 60.473 165.115 26.119 1.00 51.14 O
ATOM 6 C5' U B 58 59.396 166.048 26.319 1.00 49.66 C
ATOM 7 C4' U B 58 58.072 165.392 26.014 1.00 50.20 C
ATOM 8 O4' U B 58 58.097 164.874 24.656 1.00 51.03 O
ATOM 9 C3' U B 58 57.692 164.205 26.894 1.00 50.53 C
ATOM 10 O3' U B 58 56.264 164.147 26.937 1.00 50.73 O
ATOM 11 C2' U B 58 58.209 163.031 26.075 1.00 50.24 C
ATOM 12 O2' U B 58 57.590 161.808 26.402 1.00 52.17 O
ATOM 13 C1' U B 58 57.811 163.493 24.678 1.00 51.20 C
ATOM 14 N1 U B 58 58.474 162.846 23.537 1.00 51.59 N
ATOM 15 C2 U B 58 57.706 161.996 22.750 1.00 51.34 C
ATOM 16 O2 U B 58 56.535 161.746 22.988 1.00 50.78 O
ATOM 17 N3 U B 58 58.363 161.445 21.679 1.00 51.72 N
ATOM 18 C4 U B 58 59.683 161.637 21.327 1.00 53.21 C
ATOM 19 O4 U B 58 60.140 161.034 20.359 1.00 54.12 O
ATOM 20 C5 U B 58 60.413 162.517 22.192 1.00 53.31 C
ATOM 21 C6 U B 58 59.800 163.077 23.242 1.00 52.35 C
ATOM 22 P A B 59 55.479 164.503 28.294 1.00 52.09 P
ATOM 23 OP1 A B 59 54.164 165.086 27.938 1.00 52.54 O
ATOM 24 OP2 A B 59 56.398 165.270 29.187 1.00 51.12 O
ATOM 25 O5' A B 59 55.182 163.069 28.922 1.00 51.39 O
TER
Atoms:
OP1: (45.997,159.831,30.511)
OP2: (45.931,157.264,30.214)
C3': (49.840,160.196,26.979)
C1': (51.608,159.590,28.424)
C5': (48.104,159.100,28.492)
O6: (54.522,154.707,26.506)
O4': (50.401,159.430,29.142)
C8: (51.412,157.071,28.264)
C2: (55.252,158.178,26.504)
C6: (54.352,155.913,26.712)
C5: (53.244,156.559,27.315)
C4: (53.260,157.932,27.438)
P: (46.668,158.500,30.617)
C4': (49.302,160.001,28.386)
C2': (51.303,160.529,27.253)
O2': (51.456,161.854,27.725)
N1: (55.328,156.820,26.332)
N2: (56.309,158.887,26.075)
N3: (54.221,158.797,27.057)
N7: (52.075,156.031,27.841)
N9: (52.074,158.257,28.053)
O5': (48.036,158.555,29.809)
O3': (49.116,161.229,26.294)
OP2: (45.931,157.264,30.214)
C3': (49.840,160.196,26.979)
C1': (51.608,159.590,28.424)
C5': (48.104,159.100,28.492)
O6: (54.522,154.707,26.506)
O4': (50.401,159.430,29.142)
C8: (51.412,157.071,28.264)
C2: (55.252,158.178,26.504)
C6: (54.352,155.913,26.712)
C5: (53.244,156.559,27.315)
C4: (53.260,157.932,27.438)
P: (46.668,158.500,30.617)
C4': (49.302,160.001,28.386)
C2': (51.303,160.529,27.253)
O2': (51.456,161.854,27.725)
N1: (55.328,156.820,26.332)
N2: (56.309,158.887,26.075)
N3: (54.221,158.797,27.057)
N7: (52.075,156.031,27.841)
N9: (52.074,158.257,28.053)
O5': (48.036,158.555,29.809)
O3': (49.116,161.229,26.294)
C4: (59.683,161.637,21.327)
N3: (58.363,161.445,21.679)
OP1: (62.918,164.538,25.874)
OP2: (62.119,166.961,26.187)
C2: (57.706,161.996,22.750)
C1': (57.811,163.493,24.678)
C3': (57.692,164.205,26.894)
O5': (60.473,165.115,26.119)
O4': (58.097,164.874,24.656)
C5': (59.396,166.048,26.319)
P: (61.971,165.515,26.484)
C4': (58.072,165.392,26.014)
C2': (58.209,163.031,26.075)
O2': (57.590,161.808,26.402)
N1: (58.474,162.846,23.537)
O4: (60.140,161.034,20.359)
O2: (56.535,161.746,22.988)
C6: (59.800,163.077,23.242)
C5: (60.413,162.517,22.192)
O3': (56.264,164.147,26.937)
N3: (58.363,161.445,21.679)
OP1: (62.918,164.538,25.874)
OP2: (62.119,166.961,26.187)
C2: (57.706,161.996,22.750)
C1': (57.811,163.493,24.678)
C3': (57.692,164.205,26.894)
O5': (60.473,165.115,26.119)
O4': (58.097,164.874,24.656)
C5': (59.396,166.048,26.319)
P: (61.971,165.515,26.484)
C4': (58.072,165.392,26.014)
C2': (58.209,163.031,26.075)
O2': (57.590,161.808,26.402)
N1: (58.474,162.846,23.537)
O4: (60.140,161.034,20.359)
O2: (56.535,161.746,22.988)
C6: (59.800,163.077,23.242)
C5: (60.413,162.517,22.192)
O3': (56.264,164.147,26.937)
Image (generated by PyMOL):