Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01278:0505
Extra
PDB:
ATOM 1 O3' A A1277 18.890 128.166 61.637 1.00 40.75 O
ATOM 2 P G A1278 18.756 128.115 63.242 1.00 41.33 P
ATOM 3 OP1 G A1278 19.331 126.810 63.663 1.00 40.80 O
ATOM 4 OP2 G A1278 17.387 128.474 63.661 1.00 40.53 O
ATOM 5 O5' G A1278 19.714 129.287 63.734 1.00 42.43 O
ATOM 6 C5' G A1278 21.102 129.314 63.353 1.00 41.15 C
ATOM 7 C4' G A1278 21.719 130.632 63.744 1.00 42.02 C
ATOM 8 O4' G A1278 21.126 131.705 62.965 1.00 42.26 O
ATOM 9 C3' G A1278 21.486 131.043 65.185 1.00 40.98 C
ATOM 10 O3' G A1278 22.424 130.415 66.049 1.00 42.01 O
ATOM 11 C2' G A1278 21.672 132.553 65.115 1.00 41.57 C
ATOM 12 O2' G A1278 23.044 132.894 65.091 1.00 40.38 O
ATOM 13 C1' G A1278 21.014 132.876 63.766 1.00 40.68 C
ATOM 14 N9 G A1278 19.594 133.196 63.893 1.00 39.35 N
ATOM 15 C8 G A1278 18.549 132.332 63.689 1.00 39.88 C
ATOM 16 N7 G A1278 17.386 132.862 63.950 1.00 40.92 N
ATOM 17 C5 G A1278 17.676 134.161 64.336 1.00 38.75 C
ATOM 18 C6 G A1278 16.816 135.200 64.762 1.00 38.95 C
ATOM 19 O6 G A1278 15.591 135.173 64.909 1.00 36.17 O
ATOM 20 N1 G A1278 17.518 136.365 65.040 1.00 37.16 N
ATOM 21 C2 G A1278 18.868 136.514 64.931 1.00 37.46 C
ATOM 22 N2 G A1278 19.343 137.744 65.217 1.00 37.87 N
ATOM 23 N3 G A1278 19.694 135.540 64.562 1.00 39.84 N
ATOM 24 C4 G A1278 19.031 134.397 64.280 1.00 39.71 C
ATOM 25 P U A1279 21.980 129.969 67.534 1.00 42.86 P
ATOM 26 OP1 U A1279 23.179 129.311 68.105 1.00 45.39 O
ATOM 27 OP2 U A1279 20.691 129.226 67.469 1.00 42.15 O
ATOM 28 O5' U A1279 21.754 131.337 68.315 1.00 40.76 O
TER
ATOM 1 O3' A B 504 22.382 145.030 60.970 1.00 45.43 O
ATOM 2 P U B 505 22.500 144.985 62.572 1.00 44.27 P
ATOM 3 OP1 U B 505 21.335 145.699 63.146 1.00 45.36 O
ATOM 4 OP2 U B 505 23.864 145.424 62.934 1.00 47.73 O
ATOM 5 O5' U B 505 22.373 143.431 62.911 1.00 42.08 O
ATOM 6 C5' U B 505 21.174 142.696 62.605 1.00 38.34 C
ATOM 7 C4' U B 505 21.412 141.214 62.798 1.00 40.06 C
ATOM 8 O4' U B 505 22.513 140.796 61.954 1.00 39.35 O
ATOM 9 C3' U B 505 21.808 140.799 64.206 1.00 39.78 C
ATOM 10 O3' U B 505 20.627 140.506 64.946 1.00 40.85 O
ATOM 11 C2' U B 505 22.606 139.523 63.970 1.00 40.71 C
ATOM 12 O2' U B 505 21.766 138.399 63.844 1.00 41.78 O
ATOM 13 C1' U B 505 23.273 139.804 62.617 1.00 39.90 C
ATOM 14 N1 U B 505 24.684 140.232 62.654 1.00 41.36 N
ATOM 15 C2 U B 505 25.654 139.262 62.877 1.00 40.55 C
ATOM 16 O2 U B 505 25.392 138.086 63.065 1.00 42.08 O
ATOM 17 N3 U B 505 26.945 139.723 62.873 1.00 40.43 N
ATOM 18 C4 U B 505 27.367 141.022 62.672 1.00 39.98 C
ATOM 19 O4 U B 505 28.579 141.274 62.683 1.00 38.40 O
ATOM 20 C5 U B 505 26.313 141.967 62.463 1.00 38.83 C
ATOM 21 C6 U B 505 25.044 141.555 62.461 1.00 39.92 C
ATOM 22 P G B 506 20.331 141.247 66.344 1.00 45.49 P
ATOM 23 OP1 G B 506 19.128 140.601 66.933 1.00 44.81 O
ATOM 24 OP2 G B 506 20.341 142.722 66.151 1.00 44.48 O
ATOM 25 O5' G B 506 21.590 140.878 67.244 1.00 45.56 O
TER
ATOM 2 P G A1278 18.756 128.115 63.242 1.00 41.33 P
ATOM 3 OP1 G A1278 19.331 126.810 63.663 1.00 40.80 O
ATOM 4 OP2 G A1278 17.387 128.474 63.661 1.00 40.53 O
ATOM 5 O5' G A1278 19.714 129.287 63.734 1.00 42.43 O
ATOM 6 C5' G A1278 21.102 129.314 63.353 1.00 41.15 C
ATOM 7 C4' G A1278 21.719 130.632 63.744 1.00 42.02 C
ATOM 8 O4' G A1278 21.126 131.705 62.965 1.00 42.26 O
ATOM 9 C3' G A1278 21.486 131.043 65.185 1.00 40.98 C
ATOM 10 O3' G A1278 22.424 130.415 66.049 1.00 42.01 O
ATOM 11 C2' G A1278 21.672 132.553 65.115 1.00 41.57 C
ATOM 12 O2' G A1278 23.044 132.894 65.091 1.00 40.38 O
ATOM 13 C1' G A1278 21.014 132.876 63.766 1.00 40.68 C
ATOM 14 N9 G A1278 19.594 133.196 63.893 1.00 39.35 N
ATOM 15 C8 G A1278 18.549 132.332 63.689 1.00 39.88 C
ATOM 16 N7 G A1278 17.386 132.862 63.950 1.00 40.92 N
ATOM 17 C5 G A1278 17.676 134.161 64.336 1.00 38.75 C
ATOM 18 C6 G A1278 16.816 135.200 64.762 1.00 38.95 C
ATOM 19 O6 G A1278 15.591 135.173 64.909 1.00 36.17 O
ATOM 20 N1 G A1278 17.518 136.365 65.040 1.00 37.16 N
ATOM 21 C2 G A1278 18.868 136.514 64.931 1.00 37.46 C
ATOM 22 N2 G A1278 19.343 137.744 65.217 1.00 37.87 N
ATOM 23 N3 G A1278 19.694 135.540 64.562 1.00 39.84 N
ATOM 24 C4 G A1278 19.031 134.397 64.280 1.00 39.71 C
ATOM 25 P U A1279 21.980 129.969 67.534 1.00 42.86 P
ATOM 26 OP1 U A1279 23.179 129.311 68.105 1.00 45.39 O
ATOM 27 OP2 U A1279 20.691 129.226 67.469 1.00 42.15 O
ATOM 28 O5' U A1279 21.754 131.337 68.315 1.00 40.76 O
TER
ATOM 1 O3' A B 504 22.382 145.030 60.970 1.00 45.43 O
ATOM 2 P U B 505 22.500 144.985 62.572 1.00 44.27 P
ATOM 3 OP1 U B 505 21.335 145.699 63.146 1.00 45.36 O
ATOM 4 OP2 U B 505 23.864 145.424 62.934 1.00 47.73 O
ATOM 5 O5' U B 505 22.373 143.431 62.911 1.00 42.08 O
ATOM 6 C5' U B 505 21.174 142.696 62.605 1.00 38.34 C
ATOM 7 C4' U B 505 21.412 141.214 62.798 1.00 40.06 C
ATOM 8 O4' U B 505 22.513 140.796 61.954 1.00 39.35 O
ATOM 9 C3' U B 505 21.808 140.799 64.206 1.00 39.78 C
ATOM 10 O3' U B 505 20.627 140.506 64.946 1.00 40.85 O
ATOM 11 C2' U B 505 22.606 139.523 63.970 1.00 40.71 C
ATOM 12 O2' U B 505 21.766 138.399 63.844 1.00 41.78 O
ATOM 13 C1' U B 505 23.273 139.804 62.617 1.00 39.90 C
ATOM 14 N1 U B 505 24.684 140.232 62.654 1.00 41.36 N
ATOM 15 C2 U B 505 25.654 139.262 62.877 1.00 40.55 C
ATOM 16 O2 U B 505 25.392 138.086 63.065 1.00 42.08 O
ATOM 17 N3 U B 505 26.945 139.723 62.873 1.00 40.43 N
ATOM 18 C4 U B 505 27.367 141.022 62.672 1.00 39.98 C
ATOM 19 O4 U B 505 28.579 141.274 62.683 1.00 38.40 O
ATOM 20 C5 U B 505 26.313 141.967 62.463 1.00 38.83 C
ATOM 21 C6 U B 505 25.044 141.555 62.461 1.00 39.92 C
ATOM 22 P G B 506 20.331 141.247 66.344 1.00 45.49 P
ATOM 23 OP1 G B 506 19.128 140.601 66.933 1.00 44.81 O
ATOM 24 OP2 G B 506 20.341 142.722 66.151 1.00 44.48 O
ATOM 25 O5' G B 506 21.590 140.878 67.244 1.00 45.56 O
TER
Atoms:
OP1: (19.331,126.810,63.663)
OP2: (17.387,128.474,63.661)
C3': (21.486,131.043,65.185)
C1': (21.014,132.876,63.766)
C5': (21.102,129.314,63.353)
O6: (15.591,135.173,64.909)
O4': (21.126,131.705,62.965)
C8: (18.549,132.332,63.689)
C2: (18.868,136.514,64.931)
C6: (16.816,135.200,64.762)
C5: (17.676,134.161,64.336)
C4: (19.031,134.397,64.280)
P: (18.756,128.115,63.242)
C4': (21.719,130.632,63.744)
C2': (21.672,132.553,65.115)
O2': (23.044,132.894,65.091)
N1: (17.518,136.365,65.040)
N2: (19.343,137.744,65.217)
N3: (19.694,135.540,64.562)
N7: (17.386,132.862,63.950)
N9: (19.594,133.196,63.893)
O5': (19.714,129.287,63.734)
O3': (22.424,130.415,66.049)
OP2: (17.387,128.474,63.661)
C3': (21.486,131.043,65.185)
C1': (21.014,132.876,63.766)
C5': (21.102,129.314,63.353)
O6: (15.591,135.173,64.909)
O4': (21.126,131.705,62.965)
C8: (18.549,132.332,63.689)
C2: (18.868,136.514,64.931)
C6: (16.816,135.200,64.762)
C5: (17.676,134.161,64.336)
C4: (19.031,134.397,64.280)
P: (18.756,128.115,63.242)
C4': (21.719,130.632,63.744)
C2': (21.672,132.553,65.115)
O2': (23.044,132.894,65.091)
N1: (17.518,136.365,65.040)
N2: (19.343,137.744,65.217)
N3: (19.694,135.540,64.562)
N7: (17.386,132.862,63.950)
N9: (19.594,133.196,63.893)
O5': (19.714,129.287,63.734)
O3': (22.424,130.415,66.049)
C4: (27.367,141.022,62.672)
N3: (26.945,139.723,62.873)
OP1: (21.335,145.699,63.146)
OP2: (23.864,145.424,62.934)
C2: (25.654,139.262,62.877)
C1': (23.273,139.804,62.617)
C3': (21.808,140.799,64.206)
O5': (22.373,143.431,62.911)
O4': (22.513,140.796,61.954)
C5': (21.174,142.696,62.605)
P: (22.500,144.985,62.572)
C4': (21.412,141.214,62.798)
C2': (22.606,139.523,63.970)
O2': (21.766,138.399,63.844)
N1: (24.684,140.232,62.654)
O4: (28.579,141.274,62.683)
O2: (25.392,138.086,63.065)
C6: (25.044,141.555,62.461)
C5: (26.313,141.967,62.463)
O3': (20.627,140.506,64.946)
N3: (26.945,139.723,62.873)
OP1: (21.335,145.699,63.146)
OP2: (23.864,145.424,62.934)
C2: (25.654,139.262,62.877)
C1': (23.273,139.804,62.617)
C3': (21.808,140.799,64.206)
O5': (22.373,143.431,62.911)
O4': (22.513,140.796,61.954)
C5': (21.174,142.696,62.605)
P: (22.500,144.985,62.572)
C4': (21.412,141.214,62.798)
C2': (22.606,139.523,63.970)
O2': (21.766,138.399,63.844)
N1: (24.684,140.232,62.654)
O4: (28.579,141.274,62.683)
O2: (25.392,138.086,63.065)
C6: (25.044,141.555,62.461)
C5: (26.313,141.967,62.463)
O3': (20.627,140.506,64.946)
Image (generated by PyMOL):