Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:061:058
Extra
PDB:
ATOM 1 O3' A A 60 47.185 158.229 32.108 1.00 54.83 O
ATOM 2 P G A 61 46.713 158.450 30.591 1.00 57.62 P
ATOM 3 OP1 G A 61 46.127 159.817 30.464 1.00 56.01 O
ATOM 4 OP2 G A 61 45.907 157.258 30.195 1.00 57.38 O
ATOM 5 O5' G A 61 48.083 158.420 29.788 1.00 54.97 O
ATOM 6 C5' G A 61 48.176 158.952 28.468 1.00 53.06 C
ATOM 7 C4' G A 61 49.322 159.919 28.398 1.00 52.16 C
ATOM 8 O4' G A 61 50.431 159.404 29.178 1.00 49.38 O
ATOM 9 C3' G A 61 49.873 160.168 27.004 1.00 52.60 C
ATOM 10 O3' G A 61 49.136 161.196 26.326 1.00 53.34 O
ATOM 11 C2' G A 61 51.326 160.517 27.303 1.00 51.00 C
ATOM 12 O2' G A 61 51.458 161.831 27.809 1.00 52.59 O
ATOM 13 C1' G A 61 51.631 159.549 28.450 1.00 48.19 C
ATOM 14 N9 G A 61 52.061 158.212 28.049 1.00 45.44 N
ATOM 15 C8 G A 61 51.374 157.037 28.245 1.00 44.92 C
ATOM 16 N7 G A 61 52.011 155.989 27.802 1.00 44.09 N
ATOM 17 C5 G A 61 53.190 156.499 27.279 1.00 44.25 C
ATOM 18 C6 G A 61 54.284 155.838 26.667 1.00 44.64 C
ATOM 19 O6 G A 61 54.440 154.628 26.463 1.00 45.98 O
ATOM 20 N1 G A 61 55.269 156.734 26.280 1.00 44.97 N
ATOM 21 C2 G A 61 55.215 158.090 26.459 1.00 46.19 C
ATOM 22 N2 G A 61 56.263 158.785 26.000 1.00 47.62 N
ATOM 23 N3 G A 61 54.207 158.721 27.040 1.00 45.97 N
ATOM 24 C4 G A 61 53.235 157.870 27.420 1.00 44.71 C
ATOM 25 P C A 62 48.581 160.939 24.829 1.00 54.60 P
ATOM 26 OP1 C A 62 47.672 162.061 24.498 1.00 53.69 O
ATOM 27 OP2 C A 62 48.092 159.545 24.700 1.00 53.95 O
ATOM 28 O5' C A 62 49.877 161.065 23.915 1.00 53.75 O
TER
ATOM 1 O3' A B 57 62.042 165.295 28.056 1.00 47.51 O
ATOM 2 P U B 58 62.003 165.443 26.459 1.00 45.56 P
ATOM 3 OP1 U B 58 62.953 164.464 25.863 1.00 44.59 O
ATOM 4 OP2 U B 58 62.164 166.884 26.169 1.00 45.21 O
ATOM 5 O5' U B 58 60.507 165.046 26.085 1.00 43.99 O
ATOM 6 C5' U B 58 59.432 165.970 26.321 1.00 43.42 C
ATOM 7 C4' U B 58 58.103 165.328 26.007 1.00 44.01 C
ATOM 8 O4' U B 58 58.137 164.811 24.649 1.00 44.54 O
ATOM 9 C3' U B 58 57.687 164.148 26.881 1.00 43.79 C
ATOM 10 O3' U B 58 56.256 164.130 26.909 1.00 44.79 O
ATOM 11 C2' U B 58 58.176 162.965 26.057 1.00 43.81 C
ATOM 12 O2' U B 58 57.553 161.738 26.373 1.00 43.50 O
ATOM 13 C1' U B 58 57.792 163.446 24.662 1.00 43.88 C
ATOM 14 N1 U B 58 58.430 162.779 23.520 1.00 44.67 N
ATOM 15 C2 U B 58 57.656 161.897 22.778 1.00 44.99 C
ATOM 16 O2 U B 58 56.492 161.632 23.049 1.00 43.72 O
ATOM 17 N3 U B 58 58.298 161.325 21.710 1.00 45.44 N
ATOM 18 C4 U B 58 59.605 161.522 21.325 1.00 45.91 C
ATOM 19 O4 U B 58 60.049 160.900 20.363 1.00 46.69 O
ATOM 20 C5 U B 58 60.340 162.435 22.146 1.00 46.41 C
ATOM 21 C6 U B 58 59.742 163.019 23.189 1.00 45.58 C
ATOM 22 P A B 59 55.463 164.469 28.265 1.00 46.17 P
ATOM 23 OP1 A B 59 54.155 165.043 27.884 1.00 48.85 O
ATOM 24 OP2 A B 59 56.354 165.234 29.178 1.00 45.24 O
ATOM 25 O5' A B 59 55.155 163.035 28.886 1.00 45.62 O
TER
ATOM 2 P G A 61 46.713 158.450 30.591 1.00 57.62 P
ATOM 3 OP1 G A 61 46.127 159.817 30.464 1.00 56.01 O
ATOM 4 OP2 G A 61 45.907 157.258 30.195 1.00 57.38 O
ATOM 5 O5' G A 61 48.083 158.420 29.788 1.00 54.97 O
ATOM 6 C5' G A 61 48.176 158.952 28.468 1.00 53.06 C
ATOM 7 C4' G A 61 49.322 159.919 28.398 1.00 52.16 C
ATOM 8 O4' G A 61 50.431 159.404 29.178 1.00 49.38 O
ATOM 9 C3' G A 61 49.873 160.168 27.004 1.00 52.60 C
ATOM 10 O3' G A 61 49.136 161.196 26.326 1.00 53.34 O
ATOM 11 C2' G A 61 51.326 160.517 27.303 1.00 51.00 C
ATOM 12 O2' G A 61 51.458 161.831 27.809 1.00 52.59 O
ATOM 13 C1' G A 61 51.631 159.549 28.450 1.00 48.19 C
ATOM 14 N9 G A 61 52.061 158.212 28.049 1.00 45.44 N
ATOM 15 C8 G A 61 51.374 157.037 28.245 1.00 44.92 C
ATOM 16 N7 G A 61 52.011 155.989 27.802 1.00 44.09 N
ATOM 17 C5 G A 61 53.190 156.499 27.279 1.00 44.25 C
ATOM 18 C6 G A 61 54.284 155.838 26.667 1.00 44.64 C
ATOM 19 O6 G A 61 54.440 154.628 26.463 1.00 45.98 O
ATOM 20 N1 G A 61 55.269 156.734 26.280 1.00 44.97 N
ATOM 21 C2 G A 61 55.215 158.090 26.459 1.00 46.19 C
ATOM 22 N2 G A 61 56.263 158.785 26.000 1.00 47.62 N
ATOM 23 N3 G A 61 54.207 158.721 27.040 1.00 45.97 N
ATOM 24 C4 G A 61 53.235 157.870 27.420 1.00 44.71 C
ATOM 25 P C A 62 48.581 160.939 24.829 1.00 54.60 P
ATOM 26 OP1 C A 62 47.672 162.061 24.498 1.00 53.69 O
ATOM 27 OP2 C A 62 48.092 159.545 24.700 1.00 53.95 O
ATOM 28 O5' C A 62 49.877 161.065 23.915 1.00 53.75 O
TER
ATOM 1 O3' A B 57 62.042 165.295 28.056 1.00 47.51 O
ATOM 2 P U B 58 62.003 165.443 26.459 1.00 45.56 P
ATOM 3 OP1 U B 58 62.953 164.464 25.863 1.00 44.59 O
ATOM 4 OP2 U B 58 62.164 166.884 26.169 1.00 45.21 O
ATOM 5 O5' U B 58 60.507 165.046 26.085 1.00 43.99 O
ATOM 6 C5' U B 58 59.432 165.970 26.321 1.00 43.42 C
ATOM 7 C4' U B 58 58.103 165.328 26.007 1.00 44.01 C
ATOM 8 O4' U B 58 58.137 164.811 24.649 1.00 44.54 O
ATOM 9 C3' U B 58 57.687 164.148 26.881 1.00 43.79 C
ATOM 10 O3' U B 58 56.256 164.130 26.909 1.00 44.79 O
ATOM 11 C2' U B 58 58.176 162.965 26.057 1.00 43.81 C
ATOM 12 O2' U B 58 57.553 161.738 26.373 1.00 43.50 O
ATOM 13 C1' U B 58 57.792 163.446 24.662 1.00 43.88 C
ATOM 14 N1 U B 58 58.430 162.779 23.520 1.00 44.67 N
ATOM 15 C2 U B 58 57.656 161.897 22.778 1.00 44.99 C
ATOM 16 O2 U B 58 56.492 161.632 23.049 1.00 43.72 O
ATOM 17 N3 U B 58 58.298 161.325 21.710 1.00 45.44 N
ATOM 18 C4 U B 58 59.605 161.522 21.325 1.00 45.91 C
ATOM 19 O4 U B 58 60.049 160.900 20.363 1.00 46.69 O
ATOM 20 C5 U B 58 60.340 162.435 22.146 1.00 46.41 C
ATOM 21 C6 U B 58 59.742 163.019 23.189 1.00 45.58 C
ATOM 22 P A B 59 55.463 164.469 28.265 1.00 46.17 P
ATOM 23 OP1 A B 59 54.155 165.043 27.884 1.00 48.85 O
ATOM 24 OP2 A B 59 56.354 165.234 29.178 1.00 45.24 O
ATOM 25 O5' A B 59 55.155 163.035 28.886 1.00 45.62 O
TER
Atoms:
OP1: (46.127,159.817,30.464)
OP2: (45.907,157.258,30.195)
C3': (49.873,160.168,27.004)
C1': (51.631,159.549,28.450)
C5': (48.176,158.952,28.468)
O6: (54.440,154.628,26.463)
O4': (50.431,159.404,29.178)
C8: (51.374,157.037,28.245)
C2: (55.215,158.090,26.459)
C6: (54.284,155.838,26.667)
C5: (53.190,156.499,27.279)
C4: (53.235,157.870,27.420)
P: (46.713,158.450,30.591)
C4': (49.322,159.919,28.398)
C2': (51.326,160.517,27.303)
O2': (51.458,161.831,27.809)
N1: (55.269,156.734,26.280)
N2: (56.263,158.785,26.000)
N3: (54.207,158.721,27.040)
N7: (52.011,155.989,27.802)
N9: (52.061,158.212,28.049)
O5': (48.083,158.420,29.788)
O3': (49.136,161.196,26.326)
OP2: (45.907,157.258,30.195)
C3': (49.873,160.168,27.004)
C1': (51.631,159.549,28.450)
C5': (48.176,158.952,28.468)
O6: (54.440,154.628,26.463)
O4': (50.431,159.404,29.178)
C8: (51.374,157.037,28.245)
C2: (55.215,158.090,26.459)
C6: (54.284,155.838,26.667)
C5: (53.190,156.499,27.279)
C4: (53.235,157.870,27.420)
P: (46.713,158.450,30.591)
C4': (49.322,159.919,28.398)
C2': (51.326,160.517,27.303)
O2': (51.458,161.831,27.809)
N1: (55.269,156.734,26.280)
N2: (56.263,158.785,26.000)
N3: (54.207,158.721,27.040)
N7: (52.011,155.989,27.802)
N9: (52.061,158.212,28.049)
O5': (48.083,158.420,29.788)
O3': (49.136,161.196,26.326)
C4: (59.605,161.522,21.325)
N3: (58.298,161.325,21.710)
OP1: (62.953,164.464,25.863)
OP2: (62.164,166.884,26.169)
C2: (57.656,161.897,22.778)
C1': (57.792,163.446,24.662)
C3': (57.687,164.148,26.881)
O5': (60.507,165.046,26.085)
O4': (58.137,164.811,24.649)
C5': (59.432,165.970,26.321)
P: (62.003,165.443,26.459)
C4': (58.103,165.328,26.007)
C2': (58.176,162.965,26.057)
O2': (57.553,161.738,26.373)
N1: (58.430,162.779,23.520)
O4: (60.049,160.900,20.363)
O2: (56.492,161.632,23.049)
C6: (59.742,163.019,23.189)
C5: (60.340,162.435,22.146)
O3': (56.256,164.130,26.909)
N3: (58.298,161.325,21.710)
OP1: (62.953,164.464,25.863)
OP2: (62.164,166.884,26.169)
C2: (57.656,161.897,22.778)
C1': (57.792,163.446,24.662)
C3': (57.687,164.148,26.881)
O5': (60.507,165.046,26.085)
O4': (58.137,164.811,24.649)
C5': (59.432,165.970,26.321)
P: (62.003,165.443,26.459)
C4': (58.103,165.328,26.007)
C2': (58.176,162.965,26.057)
O2': (57.553,161.738,26.373)
N1: (58.430,162.779,23.520)
O4: (60.049,160.900,20.363)
O2: (56.492,161.632,23.049)
C6: (59.742,163.019,23.189)
C5: (60.340,162.435,22.146)
O3': (56.256,164.130,26.909)
Image (generated by PyMOL):