ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A611:A113

Extra

PDB:
ATOM 1 O3' A A 610 126.660 98.814 -12.209 1.00 64.69 O
ATOM 2 P G A 611 125.676 98.638 -13.467 1.00 60.92 P
ATOM 3 OP1 G A 611 126.349 99.195 -14.679 1.00 62.76 O
ATOM 4 OP2 G A 611 124.350 99.151 -13.083 1.00 61.54 O
ATOM 5 O5' G A 611 125.589 97.065 -13.655 1.00 57.96 O
ATOM 6 C5' G A 611 126.759 96.299 -13.987 1.00 51.61 C
ATOM 7 C4' G A 611 126.422 94.832 -14.082 1.00 46.83 C
ATOM 8 O4' G A 611 126.167 94.282 -12.763 1.00 45.55 O
ATOM 9 C3' G A 611 125.183 94.511 -14.887 1.00 43.50 C
ATOM 10 O3' G A 611 125.458 94.447 -16.247 1.00 40.91 O
ATOM 11 C2' G A 611 124.761 93.166 -14.320 1.00 44.73 C
ATOM 12 O2' G A 611 125.492 92.102 -14.893 1.00 42.81 O
ATOM 13 C1' G A 611 125.121 93.328 -12.838 1.00 46.26 C
ATOM 14 N9 G A 611 123.989 93.847 -12.069 1.00 48.47 N
ATOM 15 C8 G A 611 123.704 95.171 -11.822 1.00 48.95 C
ATOM 16 N7 G A 611 122.599 95.345 -11.153 1.00 49.57 N
ATOM 17 C5 G A 611 122.125 94.058 -10.931 1.00 49.62 C
ATOM 18 C6 G A 611 120.955 93.617 -10.270 1.00 49.02 C
ATOM 19 O6 G A 611 120.067 94.292 -9.747 1.00 50.49 O
ATOM 20 N1 G A 611 120.863 92.235 -10.264 1.00 48.96 N
ATOM 21 C2 G A 611 121.768 91.382 -10.832 1.00 49.05 C
ATOM 22 N2 G A 611 121.497 90.075 -10.710 1.00 50.13 N
ATOM 23 N3 G A 611 122.858 91.777 -11.468 1.00 49.35 N
ATOM 24 C4 G A 611 122.975 93.120 -11.478 1.00 49.09 C
ATOM 25 P C A 612 124.297 94.789 -17.293 1.00 41.63 P
ATOM 26 OP1 C A 612 124.852 94.757 -18.686 1.00 41.69 O
ATOM 27 OP2 C A 612 123.623 96.011 -16.810 1.00 42.72 O
ATOM 28 O5' C A 612 123.278 93.580 -17.130 1.00 40.48 O
TER

ATOM 1 O3' G B 112 126.431 83.572 -8.303 1.00 28.12 O
ATOM 2 P U B 113 124.840 83.671 -8.199 1.00 27.24 P
ATOM 3 OP1 U B 113 124.569 84.323 -6.862 1.00 26.92 O
ATOM 4 OP2 U B 113 124.273 82.338 -8.516 1.00 25.70 O
ATOM 5 O5' U B 113 124.463 84.632 -9.401 1.00 25.50 O
ATOM 6 C5' U B 113 124.789 86.021 -9.375 1.00 24.24 C
ATOM 7 C4' U B 113 124.360 86.664 -10.667 1.00 24.69 C
ATOM 8 O4' U B 113 125.174 86.138 -11.746 1.00 25.96 O
ATOM 9 C3' U B 113 122.941 86.370 -11.116 1.00 25.05 C
ATOM 10 O3' U B 113 121.992 87.197 -10.516 1.00 25.63 O
ATOM 11 C2' U B 113 123.016 86.589 -12.620 1.00 25.06 C
ATOM 12 O2' U B 113 122.930 87.952 -12.978 1.00 24.80 O
ATOM 13 C1' U B 113 124.411 86.054 -12.937 1.00 23.23 C
ATOM 14 N1 U B 113 124.347 84.641 -13.332 1.00 23.18 N
ATOM 15 C2 U B 113 124.192 84.331 -14.689 1.00 21.05 C
ATOM 16 O2 U B 113 124.162 85.167 -15.572 1.00 17.32 O
ATOM 17 N3 U B 113 124.075 82.993 -14.959 1.00 19.57 N
ATOM 18 C4 U B 113 124.109 81.961 -14.049 1.00 20.65 C
ATOM 19 O4 U B 113 123.944 80.814 -14.443 1.00 23.46 O
ATOM 20 C5 U B 113 124.300 82.358 -12.683 1.00 22.07 C
ATOM 21 C6 U B 113 124.411 83.644 -12.378 1.00 22.15 C
ATOM 22 P G B 114 120.468 86.700 -10.411 1.00 28.57 P
ATOM 23 OP1 G B 114 119.795 87.780 -9.639 1.00 29.69 O
ATOM 24 OP2 G B 114 120.395 85.293 -9.938 1.00 27.89 O
ATOM 25 O5' G B 114 119.936 86.742 -11.905 1.00 26.89 O
TER

Atoms:
OP1: (126.349,99.195,-14.679)
OP2: (124.350,99.151,-13.083)
C3': (125.183,94.511,-14.887)
C1': (125.121,93.328,-12.838)
C5': (126.759,96.299,-13.987)
O6: (120.067,94.292,-9.747)
O4': (126.167,94.282,-12.763)
C8: (123.704,95.171,-11.822)
C2: (121.768,91.382,-10.832)
C6: (120.955,93.617,-10.270)
C5: (122.125,94.058,-10.931)
C4: (122.975,93.120,-11.478)
P: (125.676,98.638,-13.467)
C4': (126.422,94.832,-14.082)
C2': (124.761,93.166,-14.320)
O2': (125.492,92.102,-14.893)
N1: (120.863,92.235,-10.264)
N2: (121.497,90.075,-10.710)
N3: (122.858,91.777,-11.468)
N7: (122.599,95.345,-11.153)
N9: (123.989,93.847,-12.069)
O5': (125.589,97.065,-13.655)
O3': (125.458,94.447,-16.247)
C4: (124.109,81.961,-14.049)
N3: (124.075,82.993,-14.959)
OP1: (124.569,84.323,-6.862)
OP2: (124.273,82.338,-8.516)
C2: (124.192,84.331,-14.689)
C1': (124.411,86.054,-12.937)
C3': (122.941,86.370,-11.116)
O5': (124.463,84.632,-9.401)
O4': (125.174,86.138,-11.746)
C5': (124.789,86.021,-9.375)
P: (124.840,83.671,-8.199)
C4': (124.360,86.664,-10.667)
C2': (123.016,86.589,-12.620)
O2': (122.930,87.952,-12.978)
N1: (124.347,84.641,-13.332)
O4: (123.944,80.814,-14.443)
O2: (124.162,85.167,-15.572)
C6: (124.411,83.644,-12.378)
C5: (124.300,82.358,-12.683)
O3': (121.992,87.197,-10.516)
Image (generated by PyMOL):
PyMOL image
show in jmol