ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01997:01391

Extra

PDB:
ATOM 1 O3' G A1996 41.455 165.756 91.538 1.00 37.16 O
ATOM 2 P G A1997 41.344 164.462 90.611 1.00 41.52 P
ATOM 3 OP1 G A1997 40.142 164.662 89.766 1.00 40.92 O
ATOM 4 OP2 G A1997 41.455 163.251 91.457 1.00 41.80 O
ATOM 5 O5' G A1997 42.644 164.532 89.695 1.00 38.94 O
ATOM 6 C5' G A1997 42.773 165.549 88.697 1.00 38.31 C
ATOM 7 C4' G A1997 44.091 165.424 87.983 1.00 37.73 C
ATOM 8 O4' G A1997 45.187 165.686 88.904 1.00 38.64 O
ATOM 9 C3' G A1997 44.436 164.052 87.445 1.00 36.83 C
ATOM 10 O3' G A1997 43.735 163.714 86.261 1.00 36.06 O
ATOM 11 C2' G A1997 45.935 164.187 87.228 1.00 36.82 C
ATOM 12 O2' G A1997 46.242 164.941 86.076 1.00 37.76 O
ATOM 13 C1' G A1997 46.341 164.968 88.482 1.00 36.89 C
ATOM 14 N9 G A1997 46.764 164.065 89.552 1.00 35.23 N
ATOM 15 C8 G A1997 46.033 163.655 90.643 1.00 34.92 C
ATOM 16 N7 G A1997 46.666 162.789 91.387 1.00 33.73 N
ATOM 17 C5 G A1997 47.892 162.627 90.758 1.00 34.08 C
ATOM 18 C6 G A1997 48.995 161.800 91.092 1.00 34.18 C
ATOM 19 O6 G A1997 49.102 160.998 92.031 1.00 33.97 O
ATOM 20 N1 G A1997 50.043 161.960 90.193 1.00 32.27 N
ATOM 21 C2 G A1997 50.028 162.796 89.109 1.00 32.35 C
ATOM 22 N2 G A1997 51.141 162.830 88.368 1.00 31.34 N
ATOM 23 N3 G A1997 49.001 163.550 88.774 1.00 33.74 N
ATOM 24 C4 G A1997 47.976 163.421 89.637 1.00 33.98 C
ATOM 25 P U A1998 43.391 162.172 85.966 1.00 37.13 P
ATOM 26 OP1 U A1998 42.528 162.091 84.768 1.00 36.03 O
ATOM 27 OP2 U A1998 42.934 161.570 87.242 1.00 33.30 O
ATOM 28 O5' U A1998 44.802 161.544 85.577 1.00 35.88 O
TER

ATOM 1 O3' C B1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 2 P U B1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 3 OP1 U B1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 4 OP2 U B1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 5 O5' U B1391 51.913 163.969 83.412 1.00 41.93 O
ATOM 6 C5' U B1391 50.882 163.275 84.138 1.00 43.11 C
ATOM 7 C4' U B1391 50.141 164.234 85.033 1.00 43.16 C
ATOM 8 O4' U B1391 51.060 164.765 86.022 1.00 43.67 O
ATOM 9 C3' U B1391 49.581 165.449 84.318 1.00 42.46 C
ATOM 10 O3' U B1391 48.301 165.154 83.756 1.00 42.08 O
ATOM 11 C2' U B1391 49.547 166.492 85.430 1.00 42.62 C
ATOM 12 O2' U B1391 48.445 166.340 86.298 1.00 41.98 O
ATOM 13 C1' U B1391 50.823 166.147 86.206 1.00 42.78 C
ATOM 14 N1 U B1391 52.035 166.877 85.792 1.00 43.96 N
ATOM 15 C2 U B1391 52.072 168.245 85.993 1.00 44.61 C
ATOM 16 O2 U B1391 51.142 168.867 86.470 1.00 47.01 O
ATOM 17 N3 U B1391 53.240 168.860 85.613 1.00 42.67 N
ATOM 18 C4 U B1391 54.347 168.266 85.064 1.00 41.64 C
ATOM 19 O4 U B1391 55.339 168.948 84.823 1.00 41.64 O
ATOM 20 C5 U B1391 54.233 166.859 84.870 1.00 42.97 C
ATOM 21 C6 U B1391 53.111 166.226 85.230 1.00 43.35 C
ATOM 22 P G B1392 47.933 165.664 82.273 1.00 42.36 P
ATOM 23 OP1 G B1392 46.539 165.238 82.000 1.00 40.35 O
ATOM 24 OP2 G B1392 49.014 165.283 81.329 1.00 42.01 O
ATOM 25 O5' G B1392 47.938 167.246 82.398 1.00 41.44 O
TER

Atoms:
OP1: (40.142,164.662,89.766)
OP2: (41.455,163.251,91.457)
C3': (44.436,164.052,87.445)
C1': (46.341,164.968,88.482)
C5': (42.773,165.549,88.697)
O6: (49.102,160.998,92.031)
O4': (45.187,165.686,88.904)
C8: (46.033,163.655,90.643)
C2: (50.028,162.796,89.109)
C6: (48.995,161.800,91.092)
C5: (47.892,162.627,90.758)
C4: (47.976,163.421,89.637)
P: (41.344,164.462,90.611)
C4': (44.091,165.424,87.983)
C2': (45.935,164.187,87.228)
O2': (46.242,164.941,86.076)
N1: (50.043,161.960,90.193)
N2: (51.141,162.830,88.368)
N3: (49.001,163.550,88.774)
N7: (46.666,162.789,91.387)
N9: (46.764,164.065,89.552)
O5': (42.644,164.532,89.695)
O3': (43.735,163.714,86.261)
C4: (54.347,168.266,85.064)
N3: (53.240,168.860,85.613)
OP1: (51.888,162.273,81.574)
OP2: (53.577,164.210,81.552)
C2: (52.072,168.245,85.993)
C1': (50.823,166.147,86.206)
C3': (49.581,165.449,84.318)
O5': (51.913,163.969,83.412)
O4': (51.060,164.765,86.022)
C5': (50.882,163.275,84.138)
P: (52.777,163.212,82.311)
C4': (50.141,164.234,85.033)
C2': (49.547,166.492,85.430)
O2': (48.445,166.340,86.298)
N1: (52.035,166.877,85.792)
O4: (55.339,168.948,84.823)
O2: (51.142,168.867,86.470)
C6: (53.111,166.226,85.230)
C5: (54.233,166.859,84.870)
O3': (48.301,165.154,83.756)
Image (generated by PyMOL):
PyMOL image
show in jmol