Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01278:0505
Extra
PDB:
ATOM 1 O3' A A1277 19.746 129.438 61.670 1.00 46.67 O
ATOM 2 P G A1278 19.620 129.377 63.272 1.00 47.62 P
ATOM 3 OP1 G A1278 20.183 128.076 63.694 1.00 47.07 O
ATOM 4 OP2 G A1278 18.239 129.735 63.663 1.00 46.65 O
ATOM 5 O5' G A1278 20.572 130.554 63.768 1.00 48.39 O
ATOM 6 C5' G A1278 21.964 130.614 63.372 1.00 47.16 C
ATOM 7 C4' G A1278 22.570 131.922 63.817 1.00 45.52 C
ATOM 8 O4' G A1278 21.957 133.018 63.081 1.00 46.34 O
ATOM 9 C3' G A1278 22.297 132.256 65.269 1.00 45.89 C
ATOM 10 O3' G A1278 23.187 131.607 66.153 1.00 45.02 O
ATOM 11 C2' G A1278 22.410 133.771 65.283 1.00 47.04 C
ATOM 12 O2' G A1278 23.743 134.229 65.291 1.00 47.43 O
ATOM 13 C1' G A1278 21.743 134.124 63.951 1.00 47.38 C
ATOM 14 N9 G A1278 20.299 134.328 64.113 1.00 47.49 N
ATOM 15 C8 G A1278 19.312 133.379 63.996 1.00 46.85 C
ATOM 16 N7 G A1278 18.119 133.847 64.249 1.00 47.66 N
ATOM 17 C5 G A1278 18.324 135.190 64.537 1.00 46.19 C
ATOM 18 C6 G A1278 17.397 136.206 64.896 1.00 45.89 C
ATOM 19 O6 G A1278 16.167 136.128 65.000 1.00 45.67 O
ATOM 20 N1 G A1278 18.033 137.416 65.130 1.00 44.59 N
ATOM 21 C2 G A1278 19.381 137.638 65.010 1.00 45.27 C
ATOM 22 N2 G A1278 19.806 138.894 65.269 1.00 44.42 N
ATOM 23 N3 G A1278 20.253 136.704 64.661 1.00 46.53 N
ATOM 24 C4 G A1278 19.660 135.510 64.448 1.00 46.80 C
ATOM 25 P C A1279 22.717 131.288 67.657 1.00 47.17 P
ATOM 26 OP1 C A1279 23.917 130.771 68.349 1.00 49.78 O
ATOM 27 OP2 C A1279 21.470 130.473 67.643 1.00 44.83 O
ATOM 28 O5' C A1279 22.411 132.717 68.282 1.00 44.71 O
TER
ATOM 1 O3' A B 504 23.317 146.393 61.370 1.00 48.49 O
ATOM 2 P U B 505 23.256 146.182 62.958 1.00 48.56 P
ATOM 3 OP1 U B 505 21.990 146.770 63.457 1.00 48.19 O
ATOM 4 OP2 U B 505 24.546 146.633 63.535 1.00 50.66 O
ATOM 5 O5' U B 505 23.140 144.606 63.124 1.00 46.35 O
ATOM 6 C5' U B 505 21.913 143.929 62.828 1.00 45.46 C
ATOM 7 C4' U B 505 22.114 142.441 62.924 1.00 45.90 C
ATOM 8 O4' U B 505 23.211 142.064 62.061 1.00 43.59 O
ATOM 9 C3' U B 505 22.500 141.930 64.300 1.00 44.21 C
ATOM 10 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 11 C2' U B 505 23.247 140.648 63.972 1.00 43.75 C
ATOM 12 O2' U B 505 22.345 139.598 63.716 1.00 41.69 O
ATOM 13 C1' U B 505 23.943 141.018 62.659 1.00 45.54 C
ATOM 14 N1 U B 505 25.350 141.437 62.754 1.00 48.00 N
ATOM 15 C2 U B 505 26.321 140.457 62.899 1.00 48.19 C
ATOM 16 O2 U B 505 26.062 139.273 62.992 1.00 49.10 O
ATOM 17 N3 U B 505 27.611 140.920 62.931 1.00 49.68 N
ATOM 18 C4 U B 505 28.026 142.233 62.837 1.00 50.63 C
ATOM 19 O4 U B 505 29.231 142.488 62.782 1.00 52.06 O
ATOM 20 C5 U B 505 26.968 143.181 62.713 1.00 51.40 C
ATOM 21 C6 U B 505 25.699 142.763 62.678 1.00 50.22 C
ATOM 22 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 23 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 24 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 25 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
TER
ATOM 2 P G A1278 19.620 129.377 63.272 1.00 47.62 P
ATOM 3 OP1 G A1278 20.183 128.076 63.694 1.00 47.07 O
ATOM 4 OP2 G A1278 18.239 129.735 63.663 1.00 46.65 O
ATOM 5 O5' G A1278 20.572 130.554 63.768 1.00 48.39 O
ATOM 6 C5' G A1278 21.964 130.614 63.372 1.00 47.16 C
ATOM 7 C4' G A1278 22.570 131.922 63.817 1.00 45.52 C
ATOM 8 O4' G A1278 21.957 133.018 63.081 1.00 46.34 O
ATOM 9 C3' G A1278 22.297 132.256 65.269 1.00 45.89 C
ATOM 10 O3' G A1278 23.187 131.607 66.153 1.00 45.02 O
ATOM 11 C2' G A1278 22.410 133.771 65.283 1.00 47.04 C
ATOM 12 O2' G A1278 23.743 134.229 65.291 1.00 47.43 O
ATOM 13 C1' G A1278 21.743 134.124 63.951 1.00 47.38 C
ATOM 14 N9 G A1278 20.299 134.328 64.113 1.00 47.49 N
ATOM 15 C8 G A1278 19.312 133.379 63.996 1.00 46.85 C
ATOM 16 N7 G A1278 18.119 133.847 64.249 1.00 47.66 N
ATOM 17 C5 G A1278 18.324 135.190 64.537 1.00 46.19 C
ATOM 18 C6 G A1278 17.397 136.206 64.896 1.00 45.89 C
ATOM 19 O6 G A1278 16.167 136.128 65.000 1.00 45.67 O
ATOM 20 N1 G A1278 18.033 137.416 65.130 1.00 44.59 N
ATOM 21 C2 G A1278 19.381 137.638 65.010 1.00 45.27 C
ATOM 22 N2 G A1278 19.806 138.894 65.269 1.00 44.42 N
ATOM 23 N3 G A1278 20.253 136.704 64.661 1.00 46.53 N
ATOM 24 C4 G A1278 19.660 135.510 64.448 1.00 46.80 C
ATOM 25 P C A1279 22.717 131.288 67.657 1.00 47.17 P
ATOM 26 OP1 C A1279 23.917 130.771 68.349 1.00 49.78 O
ATOM 27 OP2 C A1279 21.470 130.473 67.643 1.00 44.83 O
ATOM 28 O5' C A1279 22.411 132.717 68.282 1.00 44.71 O
TER
ATOM 1 O3' A B 504 23.317 146.393 61.370 1.00 48.49 O
ATOM 2 P U B 505 23.256 146.182 62.958 1.00 48.56 P
ATOM 3 OP1 U B 505 21.990 146.770 63.457 1.00 48.19 O
ATOM 4 OP2 U B 505 24.546 146.633 63.535 1.00 50.66 O
ATOM 5 O5' U B 505 23.140 144.606 63.124 1.00 46.35 O
ATOM 6 C5' U B 505 21.913 143.929 62.828 1.00 45.46 C
ATOM 7 C4' U B 505 22.114 142.441 62.924 1.00 45.90 C
ATOM 8 O4' U B 505 23.211 142.064 62.061 1.00 43.59 O
ATOM 9 C3' U B 505 22.500 141.930 64.300 1.00 44.21 C
ATOM 10 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 11 C2' U B 505 23.247 140.648 63.972 1.00 43.75 C
ATOM 12 O2' U B 505 22.345 139.598 63.716 1.00 41.69 O
ATOM 13 C1' U B 505 23.943 141.018 62.659 1.00 45.54 C
ATOM 14 N1 U B 505 25.350 141.437 62.754 1.00 48.00 N
ATOM 15 C2 U B 505 26.321 140.457 62.899 1.00 48.19 C
ATOM 16 O2 U B 505 26.062 139.273 62.992 1.00 49.10 O
ATOM 17 N3 U B 505 27.611 140.920 62.931 1.00 49.68 N
ATOM 18 C4 U B 505 28.026 142.233 62.837 1.00 50.63 C
ATOM 19 O4 U B 505 29.231 142.488 62.782 1.00 52.06 O
ATOM 20 C5 U B 505 26.968 143.181 62.713 1.00 51.40 C
ATOM 21 C6 U B 505 25.699 142.763 62.678 1.00 50.22 C
ATOM 22 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 23 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 24 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 25 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
TER
Atoms:
OP1: (20.183,128.076,63.694)
OP2: (18.239,129.735,63.663)
C3': (22.297,132.256,65.269)
C1': (21.743,134.124,63.951)
C5': (21.964,130.614,63.372)
O6: (16.167,136.128,65.000)
O4': (21.957,133.018,63.081)
C8: (19.312,133.379,63.996)
C2: (19.381,137.638,65.010)
C6: (17.397,136.206,64.896)
C5: (18.324,135.190,64.537)
C4: (19.660,135.510,64.448)
P: (19.620,129.377,63.272)
C4': (22.570,131.922,63.817)
C2': (22.410,133.771,65.283)
O2': (23.743,134.229,65.291)
N1: (18.033,137.416,65.130)
N2: (19.806,138.894,65.269)
N3: (20.253,136.704,64.661)
N7: (18.119,133.847,64.249)
N9: (20.299,134.328,64.113)
O5': (20.572,130.554,63.768)
O3': (23.187,131.607,66.153)
OP2: (18.239,129.735,63.663)
C3': (22.297,132.256,65.269)
C1': (21.743,134.124,63.951)
C5': (21.964,130.614,63.372)
O6: (16.167,136.128,65.000)
O4': (21.957,133.018,63.081)
C8: (19.312,133.379,63.996)
C2: (19.381,137.638,65.010)
C6: (17.397,136.206,64.896)
C5: (18.324,135.190,64.537)
C4: (19.660,135.510,64.448)
P: (19.620,129.377,63.272)
C4': (22.570,131.922,63.817)
C2': (22.410,133.771,65.283)
O2': (23.743,134.229,65.291)
N1: (18.033,137.416,65.130)
N2: (19.806,138.894,65.269)
N3: (20.253,136.704,64.661)
N7: (18.119,133.847,64.249)
N9: (20.299,134.328,64.113)
O5': (20.572,130.554,63.768)
O3': (23.187,131.607,66.153)
C4: (28.026,142.233,62.837)
N3: (27.611,140.920,62.931)
OP1: (21.990,146.770,63.457)
OP2: (24.546,146.633,63.535)
C2: (26.321,140.457,62.899)
C1': (23.943,141.018,62.659)
C3': (22.500,141.930,64.300)
O5': (23.140,144.606,63.124)
O4': (23.211,142.064,62.061)
C5': (21.913,143.929,62.828)
P: (23.256,146.182,62.958)
C4': (22.114,142.441,62.924)
C2': (23.247,140.648,63.972)
O2': (22.345,139.598,63.716)
N1: (25.350,141.437,62.754)
O4: (29.231,142.488,62.782)
O2: (26.062,139.273,62.992)
C6: (25.699,142.763,62.678)
C5: (26.968,143.181,62.713)
O3': (21.316,141.620,65.027)
N3: (27.611,140.920,62.931)
OP1: (21.990,146.770,63.457)
OP2: (24.546,146.633,63.535)
C2: (26.321,140.457,62.899)
C1': (23.943,141.018,62.659)
C3': (22.500,141.930,64.300)
O5': (23.140,144.606,63.124)
O4': (23.211,142.064,62.061)
C5': (21.913,143.929,62.828)
P: (23.256,146.182,62.958)
C4': (22.114,142.441,62.924)
C2': (23.247,140.648,63.972)
O2': (22.345,139.598,63.716)
N1: (25.350,141.437,62.754)
O4: (29.231,142.488,62.782)
O2: (26.062,139.273,62.992)
C6: (25.699,142.763,62.678)
C5: (26.968,143.181,62.713)
O3': (21.316,141.620,65.027)
Image (generated by PyMOL):