Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:B105:B13
Extra
PDB:
ATOM 1 O3' G A 104 -13.005-126.586 134.814 1.00104.27 O
ATOM 2 P G A 105 -13.906-127.202 136.000 1.00104.78 P
ATOM 3 OP1 G A 105 -15.301-127.316 135.503 1.00 99.28 O
ATOM 4 OP2 G A 105 -13.630-126.418 137.235 1.00 97.95 O
ATOM 5 O5' G A 105 -13.310-128.663 136.230 1.00100.13 O
ATOM 6 C5' G A 105 -13.225-129.607 135.160 1.00 98.57 C
ATOM 7 C4' G A 105 -12.432-130.820 135.594 1.00 98.20 C
ATOM 8 O4' G A 105 -11.056-130.418 135.842 1.00 97.78 O
ATOM 9 C3' G A 105 -12.862-131.440 136.916 1.00104.42 C
ATOM 10 O3' G A 105 -14.024-132.251 136.856 1.00101.74 O
ATOM 11 C2' G A 105 -11.593-132.138 137.395 1.00101.33 C
ATOM 12 O2' G A 105 -11.322-133.415 136.847 1.00 98.14 O
ATOM 13 C1' G A 105 -10.531-131.139 136.952 1.00 98.86 C
ATOM 14 N9 G A 105 -10.293-130.211 138.055 1.00 96.90 N
ATOM 15 C8 G A 105 -10.475-128.849 138.068 1.00 96.19 C
ATOM 16 N7 G A 105 -10.203-128.309 139.226 1.00 96.44 N
ATOM 17 C5 G A 105 -9.814-129.377 140.024 1.00 95.20 C
ATOM 18 C6 G A 105 -9.405-129.414 141.386 1.00 94.78 C
ATOM 19 O6 G A 105 -9.299-128.476 142.189 1.00 89.04 O
ATOM 20 N1 G A 105 -9.105-130.712 141.793 1.00 97.87 N
ATOM 21 C2 G A 105 -9.193-131.832 140.998 1.00 98.77 C
ATOM 22 N2 G A 105 -8.875-133.004 141.576 1.00 96.48 N
ATOM 23 N3 G A 105 -9.568-131.808 139.732 1.00 98.17 N
ATOM 24 C4 G A 105 -9.860-130.557 139.313 1.00 96.21 C
ATOM 25 P U A 106 -15.137-132.108 138.010 1.00 93.57 P
ATOM 26 OP1 U A 106 -16.415-132.556 137.412 1.00 94.90 O
ATOM 27 OP2 U A 106 -15.037-130.750 138.609 1.00 88.41 O
ATOM 28 O5' U A 106 -14.685-133.157 139.124 1.00104.61 O
TER
ATOM 1 O3' A B 12 -5.842-139.703 143.852 1.00 98.97 O
ATOM 2 P U B 13 -5.407-139.073 142.423 1.00 98.06 P
ATOM 3 OP1 U B 13 -5.193-140.166 141.443 1.00 91.60 O
ATOM 4 OP2 U B 13 -4.324-138.088 142.681 1.00 94.07 O
ATOM 5 O5' U B 13 -6.678-138.260 141.909 1.00108.54 O
ATOM 6 C5' U B 13 -6.993-136.978 142.436 1.00105.71 C
ATOM 7 C4' U B 13 -8.474-136.737 142.316 1.00101.60 C
ATOM 8 O4' U B 13 -8.796-136.434 140.936 1.00104.16 O
ATOM 9 C3' U B 13 -9.321-137.933 142.726 1.00103.22 C
ATOM 10 O3' U B 13 -10.419-137.492 143.514 1.00108.06 O
ATOM 11 C2' U B 13 -9.714-138.573 141.392 1.00100.40 C
ATOM 12 O2' U B 13 -10.984-139.192 141.420 1.00103.95 O
ATOM 13 C1' U B 13 -9.710-137.383 140.424 1.00103.07 C
ATOM 14 N1 U B 13 -9.286-137.730 139.052 1.00102.94 N
ATOM 15 C2 U B 13 -8.783-136.719 138.216 1.00101.33 C
ATOM 16 O2 U B 13 -8.699-135.547 138.546 1.00 96.28 O
ATOM 17 N3 U B 13 -8.389-137.141 136.972 1.00105.30 N
ATOM 18 C4 U B 13 -8.445-138.425 136.472 1.00106.66 C
ATOM 19 O4 U B 13 -7.999-138.659 135.347 1.00104.79 O
ATOM 20 C5 U B 13 -8.987-139.394 137.369 1.00104.66 C
ATOM 21 C6 U B 13 -9.376-139.027 138.592 1.00104.49 C
ATOM 22 P A B 14 -10.273-137.472 145.118 1.00107.53 P
ATOM 23 OP1 A B 14 -10.975-136.284 145.678 1.00104.38 O
ATOM 24 OP2 A B 14 -8.847-137.726 145.468 1.00103.57 O
ATOM 25 O5' A B 14 -11.050-138.770 145.585 1.00102.21 O
TER
ATOM 2 P G A 105 -13.906-127.202 136.000 1.00104.78 P
ATOM 3 OP1 G A 105 -15.301-127.316 135.503 1.00 99.28 O
ATOM 4 OP2 G A 105 -13.630-126.418 137.235 1.00 97.95 O
ATOM 5 O5' G A 105 -13.310-128.663 136.230 1.00100.13 O
ATOM 6 C5' G A 105 -13.225-129.607 135.160 1.00 98.57 C
ATOM 7 C4' G A 105 -12.432-130.820 135.594 1.00 98.20 C
ATOM 8 O4' G A 105 -11.056-130.418 135.842 1.00 97.78 O
ATOM 9 C3' G A 105 -12.862-131.440 136.916 1.00104.42 C
ATOM 10 O3' G A 105 -14.024-132.251 136.856 1.00101.74 O
ATOM 11 C2' G A 105 -11.593-132.138 137.395 1.00101.33 C
ATOM 12 O2' G A 105 -11.322-133.415 136.847 1.00 98.14 O
ATOM 13 C1' G A 105 -10.531-131.139 136.952 1.00 98.86 C
ATOM 14 N9 G A 105 -10.293-130.211 138.055 1.00 96.90 N
ATOM 15 C8 G A 105 -10.475-128.849 138.068 1.00 96.19 C
ATOM 16 N7 G A 105 -10.203-128.309 139.226 1.00 96.44 N
ATOM 17 C5 G A 105 -9.814-129.377 140.024 1.00 95.20 C
ATOM 18 C6 G A 105 -9.405-129.414 141.386 1.00 94.78 C
ATOM 19 O6 G A 105 -9.299-128.476 142.189 1.00 89.04 O
ATOM 20 N1 G A 105 -9.105-130.712 141.793 1.00 97.87 N
ATOM 21 C2 G A 105 -9.193-131.832 140.998 1.00 98.77 C
ATOM 22 N2 G A 105 -8.875-133.004 141.576 1.00 96.48 N
ATOM 23 N3 G A 105 -9.568-131.808 139.732 1.00 98.17 N
ATOM 24 C4 G A 105 -9.860-130.557 139.313 1.00 96.21 C
ATOM 25 P U A 106 -15.137-132.108 138.010 1.00 93.57 P
ATOM 26 OP1 U A 106 -16.415-132.556 137.412 1.00 94.90 O
ATOM 27 OP2 U A 106 -15.037-130.750 138.609 1.00 88.41 O
ATOM 28 O5' U A 106 -14.685-133.157 139.124 1.00104.61 O
TER
ATOM 1 O3' A B 12 -5.842-139.703 143.852 1.00 98.97 O
ATOM 2 P U B 13 -5.407-139.073 142.423 1.00 98.06 P
ATOM 3 OP1 U B 13 -5.193-140.166 141.443 1.00 91.60 O
ATOM 4 OP2 U B 13 -4.324-138.088 142.681 1.00 94.07 O
ATOM 5 O5' U B 13 -6.678-138.260 141.909 1.00108.54 O
ATOM 6 C5' U B 13 -6.993-136.978 142.436 1.00105.71 C
ATOM 7 C4' U B 13 -8.474-136.737 142.316 1.00101.60 C
ATOM 8 O4' U B 13 -8.796-136.434 140.936 1.00104.16 O
ATOM 9 C3' U B 13 -9.321-137.933 142.726 1.00103.22 C
ATOM 10 O3' U B 13 -10.419-137.492 143.514 1.00108.06 O
ATOM 11 C2' U B 13 -9.714-138.573 141.392 1.00100.40 C
ATOM 12 O2' U B 13 -10.984-139.192 141.420 1.00103.95 O
ATOM 13 C1' U B 13 -9.710-137.383 140.424 1.00103.07 C
ATOM 14 N1 U B 13 -9.286-137.730 139.052 1.00102.94 N
ATOM 15 C2 U B 13 -8.783-136.719 138.216 1.00101.33 C
ATOM 16 O2 U B 13 -8.699-135.547 138.546 1.00 96.28 O
ATOM 17 N3 U B 13 -8.389-137.141 136.972 1.00105.30 N
ATOM 18 C4 U B 13 -8.445-138.425 136.472 1.00106.66 C
ATOM 19 O4 U B 13 -7.999-138.659 135.347 1.00104.79 O
ATOM 20 C5 U B 13 -8.987-139.394 137.369 1.00104.66 C
ATOM 21 C6 U B 13 -9.376-139.027 138.592 1.00104.49 C
ATOM 22 P A B 14 -10.273-137.472 145.118 1.00107.53 P
ATOM 23 OP1 A B 14 -10.975-136.284 145.678 1.00104.38 O
ATOM 24 OP2 A B 14 -8.847-137.726 145.468 1.00103.57 O
ATOM 25 O5' A B 14 -11.050-138.770 145.585 1.00102.21 O
TER
Atoms:
OP1: (-15.301,-127.316,135.503)
OP2: (-13.630,-126.418,137.235)
C3': (-12.862,-131.440,136.916)
C1': (-10.531,-131.139,136.952)
C5': (-13.225,-129.607,135.160)
O6: (-9.299,-128.476,142.189)
O4': (-11.056,-130.418,135.842)
C8: (-10.475,-128.849,138.068)
C2: (-9.193,-131.832,140.998)
C6: (-9.405,-129.414,141.386)
C5: (-9.814,-129.377,140.024)
C4: (-9.860,-130.557,139.313)
P: (-13.906,-127.202,136.000)
C4': (-12.432,-130.820,135.594)
C2': (-11.593,-132.138,137.395)
O2': (-11.322,-133.415,136.847)
N1: (-9.105,-130.712,141.793)
N2: (-8.875,-133.004,141.576)
N3: (-9.568,-131.808,139.732)
N7: (-10.203,-128.309,139.226)
N9: (-10.293,-130.211,138.055)
O5': (-13.310,-128.663,136.230)
O3': (-14.024,-132.251,136.856)
OP2: (-13.630,-126.418,137.235)
C3': (-12.862,-131.440,136.916)
C1': (-10.531,-131.139,136.952)
C5': (-13.225,-129.607,135.160)
O6: (-9.299,-128.476,142.189)
O4': (-11.056,-130.418,135.842)
C8: (-10.475,-128.849,138.068)
C2: (-9.193,-131.832,140.998)
C6: (-9.405,-129.414,141.386)
C5: (-9.814,-129.377,140.024)
C4: (-9.860,-130.557,139.313)
P: (-13.906,-127.202,136.000)
C4': (-12.432,-130.820,135.594)
C2': (-11.593,-132.138,137.395)
O2': (-11.322,-133.415,136.847)
N1: (-9.105,-130.712,141.793)
N2: (-8.875,-133.004,141.576)
N3: (-9.568,-131.808,139.732)
N7: (-10.203,-128.309,139.226)
N9: (-10.293,-130.211,138.055)
O5': (-13.310,-128.663,136.230)
O3': (-14.024,-132.251,136.856)
C4: (-8.445,-138.425,136.472)
N3: (-8.389,-137.141,136.972)
OP1: (-5.193,-140.166,141.443)
OP2: (-4.324,-138.088,142.681)
C2: (-8.783,-136.719,138.216)
C1': (-9.710,-137.383,140.424)
C3': (-9.321,-137.933,142.726)
O5': (-6.678,-138.260,141.909)
O4': (-8.796,-136.434,140.936)
C5': (-6.993,-136.978,142.436)
P: (-5.407,-139.073,142.423)
C4': (-8.474,-136.737,142.316)
C2': (-9.714,-138.573,141.392)
O2': (-10.984,-139.192,141.420)
N1: (-9.286,-137.730,139.052)
O4: (-7.999,-138.659,135.347)
O2: (-8.699,-135.547,138.546)
C6: (-9.376,-139.027,138.592)
C5: (-8.987,-139.394,137.369)
O3': (-10.419,-137.492,143.514)
N3: (-8.389,-137.141,136.972)
OP1: (-5.193,-140.166,141.443)
OP2: (-4.324,-138.088,142.681)
C2: (-8.783,-136.719,138.216)
C1': (-9.710,-137.383,140.424)
C3': (-9.321,-137.933,142.726)
O5': (-6.678,-138.260,141.909)
O4': (-8.796,-136.434,140.936)
C5': (-6.993,-136.978,142.436)
P: (-5.407,-139.073,142.423)
C4': (-8.474,-136.737,142.316)
C2': (-9.714,-138.573,141.392)
O2': (-10.984,-139.192,141.420)
N1: (-9.286,-137.730,139.052)
O4: (-7.999,-138.659,135.347)
O2: (-8.699,-135.547,138.546)
C6: (-9.376,-139.027,138.592)
C5: (-8.987,-139.394,137.369)
O3': (-10.419,-137.492,143.514)
Image (generated by PyMOL):