Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A172:A213
Extra
PDB:
ATOM 1 O3' U A 171 84.341 60.017 -13.125 1.00 88.75 O
ATOM 2 P G A 172 84.920 60.943 -14.312 1.00 88.15 P
ATOM 3 OP1 G A 172 84.141 62.212 -14.244 1.00 87.66 O
ATOM 4 OP2 G A 172 84.969 60.159 -15.598 1.00 86.81 O
ATOM 5 O5' G A 172 86.376 61.322 -13.820 1.00 85.59 O
ATOM 6 C5' G A 172 87.482 61.352 -14.726 1.00 83.09 C
ATOM 7 C4' G A 172 88.740 60.957 -14.001 1.00 81.45 C
ATOM 8 O4' G A 172 88.572 59.631 -13.437 1.00 81.05 O
ATOM 9 C3' G A 172 89.972 60.855 -14.879 1.00 81.31 C
ATOM 10 O3' G A 172 90.593 62.118 -15.022 1.00 80.77 O
ATOM 11 C2' G A 172 90.839 59.854 -14.124 1.00 81.13 C
ATOM 12 O2' G A 172 91.564 60.453 -13.065 1.00 81.31 O
ATOM 13 C1' G A 172 89.785 58.903 -13.549 1.00 80.12 C
ATOM 14 N9 G A 172 89.542 57.740 -14.403 1.00 77.82 N
ATOM 15 C8 G A 172 88.403 57.468 -15.120 1.00 76.15 C
ATOM 16 N7 G A 172 88.483 56.364 -15.811 1.00 75.18 N
ATOM 17 C5 G A 172 89.749 55.873 -15.534 1.00 74.97 C
ATOM 18 C6 G A 172 90.404 54.707 -16.010 1.00 75.04 C
ATOM 19 O6 G A 172 89.974 53.846 -16.787 1.00 74.60 O
ATOM 20 N1 G A 172 91.688 54.591 -15.488 1.00 74.48 N
ATOM 21 C2 G A 172 92.266 55.480 -14.615 1.00 76.10 C
ATOM 22 N2 G A 172 93.524 55.197 -14.222 1.00 77.66 N
ATOM 23 N3 G A 172 91.662 56.569 -14.159 1.00 76.13 N
ATOM 24 C4 G A 172 90.416 56.703 -14.661 1.00 76.27 C
ATOM 25 P G A 173 91.260 62.519 -16.425 1.00 79.99 P
ATOM 26 OP1 G A 173 91.744 63.918 -16.242 1.00 79.56 O
ATOM 27 OP2 G A 173 90.309 62.194 -17.521 1.00 79.00 O
ATOM 28 O5' G A 173 92.518 61.543 -16.537 1.00 78.63 O
TER
ATOM 1 O3' U B 212 97.563 52.531 -7.270 1.00 69.01 O
ATOM 2 P U B 213 98.432 53.709 -7.926 1.00 69.71 P
ATOM 3 OP1 U B 213 99.318 53.006 -8.912 1.00 69.68 O
ATOM 4 OP2 U B 213 99.013 54.555 -6.844 1.00 67.43 O
ATOM 5 O5' U B 213 97.351 54.529 -8.736 1.00 68.56 O
ATOM 6 C5' U B 213 96.634 53.889 -9.799 1.00 69.60 C
ATOM 7 C4' U B 213 95.526 54.772 -10.301 1.00 70.59 C
ATOM 8 O4' U B 213 94.424 54.792 -9.360 1.00 69.43 O
ATOM 9 C3' U B 213 95.867 56.234 -10.516 1.00 72.13 C
ATOM 10 O3' U B 213 96.564 56.463 -11.738 1.00 74.47 O
ATOM 11 C2' U B 213 94.488 56.881 -10.483 1.00 71.46 C
ATOM 12 O2' U B 213 93.803 56.722 -11.711 1.00 72.96 O
ATOM 13 C1' U B 213 93.788 56.054 -9.404 1.00 69.52 C
ATOM 14 N1 U B 213 93.920 56.692 -8.086 1.00 68.47 N
ATOM 15 C2 U B 213 92.973 57.635 -7.733 1.00 69.28 C
ATOM 16 O2 U B 213 92.021 57.923 -8.448 1.00 71.03 O
ATOM 17 N3 U B 213 93.182 58.235 -6.516 1.00 67.99 N
ATOM 18 C4 U B 213 94.216 57.994 -5.640 1.00 66.80 C
ATOM 19 O4 U B 213 94.337 58.706 -4.647 1.00 68.18 O
ATOM 20 C5 U B 213 95.134 56.988 -6.062 1.00 65.74 C
ATOM 21 C6 U B 213 94.960 56.385 -7.236 1.00 67.77 C
ATOM 22 P C B 214 97.638 57.671 -11.833 1.00 75.41 P
ATOM 23 OP1 C B 214 98.295 57.465 -13.163 1.00 75.32 O
ATOM 24 OP2 C B 214 98.462 57.746 -10.586 1.00 73.75 O
ATOM 25 O5' C B 214 96.730 58.980 -11.917 1.00 74.00 O
TER
ATOM 2 P G A 172 84.920 60.943 -14.312 1.00 88.15 P
ATOM 3 OP1 G A 172 84.141 62.212 -14.244 1.00 87.66 O
ATOM 4 OP2 G A 172 84.969 60.159 -15.598 1.00 86.81 O
ATOM 5 O5' G A 172 86.376 61.322 -13.820 1.00 85.59 O
ATOM 6 C5' G A 172 87.482 61.352 -14.726 1.00 83.09 C
ATOM 7 C4' G A 172 88.740 60.957 -14.001 1.00 81.45 C
ATOM 8 O4' G A 172 88.572 59.631 -13.437 1.00 81.05 O
ATOM 9 C3' G A 172 89.972 60.855 -14.879 1.00 81.31 C
ATOM 10 O3' G A 172 90.593 62.118 -15.022 1.00 80.77 O
ATOM 11 C2' G A 172 90.839 59.854 -14.124 1.00 81.13 C
ATOM 12 O2' G A 172 91.564 60.453 -13.065 1.00 81.31 O
ATOM 13 C1' G A 172 89.785 58.903 -13.549 1.00 80.12 C
ATOM 14 N9 G A 172 89.542 57.740 -14.403 1.00 77.82 N
ATOM 15 C8 G A 172 88.403 57.468 -15.120 1.00 76.15 C
ATOM 16 N7 G A 172 88.483 56.364 -15.811 1.00 75.18 N
ATOM 17 C5 G A 172 89.749 55.873 -15.534 1.00 74.97 C
ATOM 18 C6 G A 172 90.404 54.707 -16.010 1.00 75.04 C
ATOM 19 O6 G A 172 89.974 53.846 -16.787 1.00 74.60 O
ATOM 20 N1 G A 172 91.688 54.591 -15.488 1.00 74.48 N
ATOM 21 C2 G A 172 92.266 55.480 -14.615 1.00 76.10 C
ATOM 22 N2 G A 172 93.524 55.197 -14.222 1.00 77.66 N
ATOM 23 N3 G A 172 91.662 56.569 -14.159 1.00 76.13 N
ATOM 24 C4 G A 172 90.416 56.703 -14.661 1.00 76.27 C
ATOM 25 P G A 173 91.260 62.519 -16.425 1.00 79.99 P
ATOM 26 OP1 G A 173 91.744 63.918 -16.242 1.00 79.56 O
ATOM 27 OP2 G A 173 90.309 62.194 -17.521 1.00 79.00 O
ATOM 28 O5' G A 173 92.518 61.543 -16.537 1.00 78.63 O
TER
ATOM 1 O3' U B 212 97.563 52.531 -7.270 1.00 69.01 O
ATOM 2 P U B 213 98.432 53.709 -7.926 1.00 69.71 P
ATOM 3 OP1 U B 213 99.318 53.006 -8.912 1.00 69.68 O
ATOM 4 OP2 U B 213 99.013 54.555 -6.844 1.00 67.43 O
ATOM 5 O5' U B 213 97.351 54.529 -8.736 1.00 68.56 O
ATOM 6 C5' U B 213 96.634 53.889 -9.799 1.00 69.60 C
ATOM 7 C4' U B 213 95.526 54.772 -10.301 1.00 70.59 C
ATOM 8 O4' U B 213 94.424 54.792 -9.360 1.00 69.43 O
ATOM 9 C3' U B 213 95.867 56.234 -10.516 1.00 72.13 C
ATOM 10 O3' U B 213 96.564 56.463 -11.738 1.00 74.47 O
ATOM 11 C2' U B 213 94.488 56.881 -10.483 1.00 71.46 C
ATOM 12 O2' U B 213 93.803 56.722 -11.711 1.00 72.96 O
ATOM 13 C1' U B 213 93.788 56.054 -9.404 1.00 69.52 C
ATOM 14 N1 U B 213 93.920 56.692 -8.086 1.00 68.47 N
ATOM 15 C2 U B 213 92.973 57.635 -7.733 1.00 69.28 C
ATOM 16 O2 U B 213 92.021 57.923 -8.448 1.00 71.03 O
ATOM 17 N3 U B 213 93.182 58.235 -6.516 1.00 67.99 N
ATOM 18 C4 U B 213 94.216 57.994 -5.640 1.00 66.80 C
ATOM 19 O4 U B 213 94.337 58.706 -4.647 1.00 68.18 O
ATOM 20 C5 U B 213 95.134 56.988 -6.062 1.00 65.74 C
ATOM 21 C6 U B 213 94.960 56.385 -7.236 1.00 67.77 C
ATOM 22 P C B 214 97.638 57.671 -11.833 1.00 75.41 P
ATOM 23 OP1 C B 214 98.295 57.465 -13.163 1.00 75.32 O
ATOM 24 OP2 C B 214 98.462 57.746 -10.586 1.00 73.75 O
ATOM 25 O5' C B 214 96.730 58.980 -11.917 1.00 74.00 O
TER
Atoms:
OP1: (84.141,62.212,-14.244)
OP2: (84.969,60.159,-15.598)
C3': (89.972,60.855,-14.879)
C1': (89.785,58.903,-13.549)
C5': (87.482,61.352,-14.726)
O6: (89.974,53.846,-16.787)
O4': (88.572,59.631,-13.437)
C8: (88.403,57.468,-15.120)
C2: (92.266,55.480,-14.615)
C6: (90.404,54.707,-16.010)
C5: (89.749,55.873,-15.534)
C4: (90.416,56.703,-14.661)
P: (84.920,60.943,-14.312)
C4': (88.740,60.957,-14.001)
C2': (90.839,59.854,-14.124)
O2': (91.564,60.453,-13.065)
N1: (91.688,54.591,-15.488)
N2: (93.524,55.197,-14.222)
N3: (91.662,56.569,-14.159)
N7: (88.483,56.364,-15.811)
N9: (89.542,57.740,-14.403)
O5': (86.376,61.322,-13.820)
O3': (90.593,62.118,-15.022)
OP2: (84.969,60.159,-15.598)
C3': (89.972,60.855,-14.879)
C1': (89.785,58.903,-13.549)
C5': (87.482,61.352,-14.726)
O6: (89.974,53.846,-16.787)
O4': (88.572,59.631,-13.437)
C8: (88.403,57.468,-15.120)
C2: (92.266,55.480,-14.615)
C6: (90.404,54.707,-16.010)
C5: (89.749,55.873,-15.534)
C4: (90.416,56.703,-14.661)
P: (84.920,60.943,-14.312)
C4': (88.740,60.957,-14.001)
C2': (90.839,59.854,-14.124)
O2': (91.564,60.453,-13.065)
N1: (91.688,54.591,-15.488)
N2: (93.524,55.197,-14.222)
N3: (91.662,56.569,-14.159)
N7: (88.483,56.364,-15.811)
N9: (89.542,57.740,-14.403)
O5': (86.376,61.322,-13.820)
O3': (90.593,62.118,-15.022)
C4: (94.216,57.994,-5.640)
N3: (93.182,58.235,-6.516)
OP1: (99.318,53.006,-8.912)
OP2: (99.013,54.555,-6.844)
C2: (92.973,57.635,-7.733)
C1': (93.788,56.054,-9.404)
C3': (95.867,56.234,-10.516)
O5': (97.351,54.529,-8.736)
O4': (94.424,54.792,-9.360)
C5': (96.634,53.889,-9.799)
P: (98.432,53.709,-7.926)
C4': (95.526,54.772,-10.301)
C2': (94.488,56.881,-10.483)
O2': (93.803,56.722,-11.711)
N1: (93.920,56.692,-8.086)
O4: (94.337,58.706,-4.647)
O2: (92.021,57.923,-8.448)
C6: (94.960,56.385,-7.236)
C5: (95.134,56.988,-6.062)
O3': (96.564,56.463,-11.738)
N3: (93.182,58.235,-6.516)
OP1: (99.318,53.006,-8.912)
OP2: (99.013,54.555,-6.844)
C2: (92.973,57.635,-7.733)
C1': (93.788,56.054,-9.404)
C3': (95.867,56.234,-10.516)
O5': (97.351,54.529,-8.736)
O4': (94.424,54.792,-9.360)
C5': (96.634,53.889,-9.799)
P: (98.432,53.709,-7.926)
C4': (95.526,54.772,-10.301)
C2': (94.488,56.881,-10.483)
O2': (93.803,56.722,-11.711)
N1: (93.920,56.692,-8.086)
O4: (94.337,58.706,-4.647)
O2: (92.021,57.923,-8.448)
C6: (94.960,56.385,-7.236)
C5: (95.134,56.988,-6.062)
O3': (96.564,56.463,-11.738)
Image (generated by PyMOL):