Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01278:0505
Extra
PDB:
ATOM 1 O3' A A1277 19.393 129.050 61.457 1.00 33.59 O
ATOM 2 P G A1278 19.277 128.956 63.052 1.00 33.00 P
ATOM 3 OP1 G A1278 19.900 127.668 63.447 1.00 32.16 O
ATOM 4 OP2 G A1278 17.874 129.246 63.441 1.00 31.72 O
ATOM 5 O5' G A1278 20.210 130.140 63.557 1.00 34.53 O
ATOM 6 C5' G A1278 21.594 130.202 63.161 1.00 34.16 C
ATOM 7 C4' G A1278 22.171 131.542 63.519 1.00 32.64 C
ATOM 8 O4' G A1278 21.478 132.571 62.769 1.00 34.17 O
ATOM 9 C3' G A1278 21.967 131.950 64.961 1.00 33.34 C
ATOM 10 O3' G A1278 22.933 131.355 65.814 1.00 34.65 O
ATOM 11 C2' G A1278 22.081 133.464 64.877 1.00 33.56 C
ATOM 12 O2' G A1278 23.424 133.890 64.746 1.00 33.75 O
ATOM 13 C1' G A1278 21.343 133.738 63.565 1.00 33.33 C
ATOM 14 N9 G A1278 19.918 134.003 63.746 1.00 33.04 N
ATOM 15 C8 G A1278 18.887 133.114 63.567 1.00 33.69 C
ATOM 16 N7 G A1278 17.715 133.626 63.831 1.00 33.65 N
ATOM 17 C5 G A1278 17.987 134.935 64.202 1.00 33.44 C
ATOM 18 C6 G A1278 17.113 135.968 64.612 1.00 33.15 C
ATOM 19 O6 G A1278 15.881 135.934 64.729 1.00 34.10 O
ATOM 20 N1 G A1278 17.805 137.137 64.905 1.00 32.34 N
ATOM 21 C2 G A1278 19.160 137.298 64.811 1.00 32.55 C
ATOM 22 N2 G A1278 19.633 138.518 65.127 1.00 31.88 N
ATOM 23 N3 G A1278 19.992 136.338 64.432 1.00 33.73 N
ATOM 24 C4 G A1278 19.341 135.189 64.146 1.00 33.60 C
ATOM 25 P C A1279 22.519 130.939 67.314 1.00 36.32 P
ATOM 26 OP1 C A1279 23.738 130.353 67.923 1.00 35.84 O
ATOM 27 OP2 C A1279 21.259 130.152 67.282 1.00 35.72 O
ATOM 28 O5' C A1279 22.195 132.316 68.043 1.00 33.68 O
TER
ATOM 1 O3' A B 504 22.904 145.886 61.027 1.00 37.51 O
ATOM 2 P U B 505 22.895 145.712 62.621 1.00 38.11 P
ATOM 3 OP1 U B 505 21.693 146.377 63.174 1.00 38.24 O
ATOM 4 OP2 U B 505 24.230 146.085 63.126 1.00 39.53 O
ATOM 5 O5' U B 505 22.710 144.148 62.826 1.00 36.79 O
ATOM 6 C5' U B 505 21.497 143.486 62.437 1.00 34.75 C
ATOM 7 C4' U B 505 21.673 142.000 62.577 1.00 34.41 C
ATOM 8 O4' U B 505 22.800 141.592 61.763 1.00 34.06 O
ATOM 9 C3' U B 505 22.034 141.563 63.985 1.00 33.20 C
ATOM 10 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 11 C2' U B 505 22.825 140.285 63.760 1.00 34.14 C
ATOM 12 O2' U B 505 21.962 139.177 63.610 1.00 33.64 O
ATOM 13 C1' U B 505 23.537 140.591 62.436 1.00 34.86 C
ATOM 14 N1 U B 505 24.944 141.019 62.515 1.00 36.64 N
ATOM 15 C2 U B 505 25.913 140.034 62.670 1.00 37.78 C
ATOM 16 O2 U B 505 25.645 138.853 62.799 1.00 38.61 O
ATOM 17 N3 U B 505 27.210 140.486 62.669 1.00 37.82 N
ATOM 18 C4 U B 505 27.634 141.789 62.540 1.00 37.72 C
ATOM 19 O4 U B 505 28.841 142.022 62.482 1.00 37.47 O
ATOM 20 C5 U B 505 26.579 142.756 62.415 1.00 36.79 C
ATOM 21 C6 U B 505 25.304 142.350 62.410 1.00 36.76 C
ATOM 22 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 23 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 24 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 25 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
TER
ATOM 2 P G A1278 19.277 128.956 63.052 1.00 33.00 P
ATOM 3 OP1 G A1278 19.900 127.668 63.447 1.00 32.16 O
ATOM 4 OP2 G A1278 17.874 129.246 63.441 1.00 31.72 O
ATOM 5 O5' G A1278 20.210 130.140 63.557 1.00 34.53 O
ATOM 6 C5' G A1278 21.594 130.202 63.161 1.00 34.16 C
ATOM 7 C4' G A1278 22.171 131.542 63.519 1.00 32.64 C
ATOM 8 O4' G A1278 21.478 132.571 62.769 1.00 34.17 O
ATOM 9 C3' G A1278 21.967 131.950 64.961 1.00 33.34 C
ATOM 10 O3' G A1278 22.933 131.355 65.814 1.00 34.65 O
ATOM 11 C2' G A1278 22.081 133.464 64.877 1.00 33.56 C
ATOM 12 O2' G A1278 23.424 133.890 64.746 1.00 33.75 O
ATOM 13 C1' G A1278 21.343 133.738 63.565 1.00 33.33 C
ATOM 14 N9 G A1278 19.918 134.003 63.746 1.00 33.04 N
ATOM 15 C8 G A1278 18.887 133.114 63.567 1.00 33.69 C
ATOM 16 N7 G A1278 17.715 133.626 63.831 1.00 33.65 N
ATOM 17 C5 G A1278 17.987 134.935 64.202 1.00 33.44 C
ATOM 18 C6 G A1278 17.113 135.968 64.612 1.00 33.15 C
ATOM 19 O6 G A1278 15.881 135.934 64.729 1.00 34.10 O
ATOM 20 N1 G A1278 17.805 137.137 64.905 1.00 32.34 N
ATOM 21 C2 G A1278 19.160 137.298 64.811 1.00 32.55 C
ATOM 22 N2 G A1278 19.633 138.518 65.127 1.00 31.88 N
ATOM 23 N3 G A1278 19.992 136.338 64.432 1.00 33.73 N
ATOM 24 C4 G A1278 19.341 135.189 64.146 1.00 33.60 C
ATOM 25 P C A1279 22.519 130.939 67.314 1.00 36.32 P
ATOM 26 OP1 C A1279 23.738 130.353 67.923 1.00 35.84 O
ATOM 27 OP2 C A1279 21.259 130.152 67.282 1.00 35.72 O
ATOM 28 O5' C A1279 22.195 132.316 68.043 1.00 33.68 O
TER
ATOM 1 O3' A B 504 22.904 145.886 61.027 1.00 37.51 O
ATOM 2 P U B 505 22.895 145.712 62.621 1.00 38.11 P
ATOM 3 OP1 U B 505 21.693 146.377 63.174 1.00 38.24 O
ATOM 4 OP2 U B 505 24.230 146.085 63.126 1.00 39.53 O
ATOM 5 O5' U B 505 22.710 144.148 62.826 1.00 36.79 O
ATOM 6 C5' U B 505 21.497 143.486 62.437 1.00 34.75 C
ATOM 7 C4' U B 505 21.673 142.000 62.577 1.00 34.41 C
ATOM 8 O4' U B 505 22.800 141.592 61.763 1.00 34.06 O
ATOM 9 C3' U B 505 22.034 141.563 63.985 1.00 33.20 C
ATOM 10 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 11 C2' U B 505 22.825 140.285 63.760 1.00 34.14 C
ATOM 12 O2' U B 505 21.962 139.177 63.610 1.00 33.64 O
ATOM 13 C1' U B 505 23.537 140.591 62.436 1.00 34.86 C
ATOM 14 N1 U B 505 24.944 141.019 62.515 1.00 36.64 N
ATOM 15 C2 U B 505 25.913 140.034 62.670 1.00 37.78 C
ATOM 16 O2 U B 505 25.645 138.853 62.799 1.00 38.61 O
ATOM 17 N3 U B 505 27.210 140.486 62.669 1.00 37.82 N
ATOM 18 C4 U B 505 27.634 141.789 62.540 1.00 37.72 C
ATOM 19 O4 U B 505 28.841 142.022 62.482 1.00 37.47 O
ATOM 20 C5 U B 505 26.579 142.756 62.415 1.00 36.79 C
ATOM 21 C6 U B 505 25.304 142.350 62.410 1.00 36.76 C
ATOM 22 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 23 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 24 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 25 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
TER
Atoms:
OP1: (19.900,127.668,63.447)
OP2: (17.874,129.246,63.441)
C3': (21.967,131.950,64.961)
C1': (21.343,133.738,63.565)
C5': (21.594,130.202,63.161)
O6: (15.881,135.934,64.729)
O4': (21.478,132.571,62.769)
C8: (18.887,133.114,63.567)
C2: (19.160,137.298,64.811)
C6: (17.113,135.968,64.612)
C5: (17.987,134.935,64.202)
C4: (19.341,135.189,64.146)
P: (19.277,128.956,63.052)
C4': (22.171,131.542,63.519)
C2': (22.081,133.464,64.877)
O2': (23.424,133.890,64.746)
N1: (17.805,137.137,64.905)
N2: (19.633,138.518,65.127)
N3: (19.992,136.338,64.432)
N7: (17.715,133.626,63.831)
N9: (19.918,134.003,63.746)
O5': (20.210,130.140,63.557)
O3': (22.933,131.355,65.814)
OP2: (17.874,129.246,63.441)
C3': (21.967,131.950,64.961)
C1': (21.343,133.738,63.565)
C5': (21.594,130.202,63.161)
O6: (15.881,135.934,64.729)
O4': (21.478,132.571,62.769)
C8: (18.887,133.114,63.567)
C2: (19.160,137.298,64.811)
C6: (17.113,135.968,64.612)
C5: (17.987,134.935,64.202)
C4: (19.341,135.189,64.146)
P: (19.277,128.956,63.052)
C4': (22.171,131.542,63.519)
C2': (22.081,133.464,64.877)
O2': (23.424,133.890,64.746)
N1: (17.805,137.137,64.905)
N2: (19.633,138.518,65.127)
N3: (19.992,136.338,64.432)
N7: (17.715,133.626,63.831)
N9: (19.918,134.003,63.746)
O5': (20.210,130.140,63.557)
O3': (22.933,131.355,65.814)
C4: (27.634,141.789,62.540)
N3: (27.210,140.486,62.669)
OP1: (21.693,146.377,63.174)
OP2: (24.230,146.085,63.126)
C2: (25.913,140.034,62.670)
C1': (23.537,140.591,62.436)
C3': (22.034,141.563,63.985)
O5': (22.710,144.148,62.826)
O4': (22.800,141.592,61.763)
C5': (21.497,143.486,62.437)
P: (22.895,145.712,62.621)
C4': (21.673,142.000,62.577)
C2': (22.825,140.285,63.760)
O2': (21.962,139.177,63.610)
N1: (24.944,141.019,62.515)
O4: (28.841,142.022,62.482)
O2: (25.645,138.853,62.799)
C6: (25.304,142.350,62.410)
C5: (26.579,142.756,62.415)
O3': (20.852,141.296,64.718)
N3: (27.210,140.486,62.669)
OP1: (21.693,146.377,63.174)
OP2: (24.230,146.085,63.126)
C2: (25.913,140.034,62.670)
C1': (23.537,140.591,62.436)
C3': (22.034,141.563,63.985)
O5': (22.710,144.148,62.826)
O4': (22.800,141.592,61.763)
C5': (21.497,143.486,62.437)
P: (22.895,145.712,62.621)
C4': (21.673,142.000,62.577)
C2': (22.825,140.285,63.760)
O2': (21.962,139.177,63.610)
N1: (24.944,141.019,62.515)
O4: (28.841,142.022,62.482)
O2: (25.645,138.853,62.799)
C6: (25.304,142.350,62.410)
C5: (26.579,142.756,62.415)
O3': (20.852,141.296,64.718)
Image (generated by PyMOL):