Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1278:A505
Extra
PDB:
ATOM 1 O3' A A1277 19.630 129.131 61.704 1.00 41.24 O
ATOM 2 P G A1278 19.426 129.077 63.287 1.00 40.31 P
ATOM 3 OP1 G A1278 19.964 127.770 63.714 1.00 39.64 O
ATOM 4 OP2 G A1278 18.026 129.425 63.574 1.00 40.01 O
ATOM 5 O5' G A1278 20.346 130.262 63.827 1.00 39.40 O
ATOM 6 C5' G A1278 21.771 130.257 63.572 1.00 38.49 C
ATOM 7 C4' G A1278 22.374 131.579 63.941 1.00 37.88 C
ATOM 8 O4' G A1278 21.708 132.613 63.185 1.00 38.54 O
ATOM 9 C3' G A1278 22.132 131.991 65.374 1.00 38.02 C
ATOM 10 O3' G A1278 23.083 131.406 66.229 1.00 37.43 O
ATOM 11 C2' G A1278 22.294 133.492 65.297 1.00 38.96 C
ATOM 12 O2' G A1278 23.662 133.819 65.170 1.00 39.04 O
ATOM 13 C1' G A1278 21.565 133.779 63.985 1.00 38.96 C
ATOM 14 N9 G A1278 20.135 134.030 64.185 1.00 38.78 N
ATOM 15 C8 G A1278 19.108 133.121 64.106 1.00 38.48 C
ATOM 16 N7 G A1278 17.936 133.652 64.327 1.00 38.92 N
ATOM 17 C5 G A1278 18.209 134.984 64.584 1.00 37.75 C
ATOM 18 C6 G A1278 17.345 136.054 64.896 1.00 38.28 C
ATOM 19 O6 G A1278 16.111 136.046 65.022 1.00 39.74 O
ATOM 20 N1 G A1278 18.049 137.240 65.066 1.00 38.38 N
ATOM 21 C2 G A1278 19.410 137.381 64.945 1.00 39.42 C
ATOM 22 N2 G A1278 19.922 138.624 65.150 1.00 39.62 N
ATOM 23 N3 G A1278 20.218 136.388 64.650 1.00 39.00 N
ATOM 24 C4 G A1278 19.560 135.232 64.491 1.00 38.08 C
ATOM 25 P U A1279 22.633 130.904 67.675 1.00 36.61 P
ATOM 26 OP1 U A1279 23.847 130.328 68.299 1.00 39.20 O
ATOM 27 OP2 U A1279 21.441 130.060 67.487 1.00 33.84 O
ATOM 28 O5' U A1279 22.310 132.261 68.433 1.00 35.58 O
TER
ATOM 1 O3' A B 504 23.256 146.022 61.390 1.00 46.07 O
ATOM 2 P U B 505 23.172 145.735 62.960 1.00 46.40 P
ATOM 3 OP1 U B 505 21.869 146.175 63.522 1.00 45.30 O
ATOM 4 OP2 U B 505 24.431 146.258 63.545 1.00 46.73 O
ATOM 5 O5' U B 505 23.075 144.155 63.017 1.00 44.62 O
ATOM 6 C5' U B 505 21.821 143.514 62.760 1.00 44.27 C
ATOM 7 C4' U B 505 21.976 142.026 62.855 1.00 44.46 C
ATOM 8 O4' U B 505 23.061 141.638 61.991 1.00 43.63 O
ATOM 9 C3' U B 505 22.375 141.536 64.235 1.00 43.42 C
ATOM 10 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 11 C2' U B 505 23.127 140.255 63.934 1.00 43.66 C
ATOM 12 O2' U B 505 22.222 139.193 63.736 1.00 44.66 O
ATOM 13 C1' U B 505 23.807 140.606 62.608 1.00 44.29 C
ATOM 14 N1 U B 505 25.202 141.050 62.719 1.00 45.02 N
ATOM 15 C2 U B 505 26.173 140.085 62.871 1.00 44.85 C
ATOM 16 O2 U B 505 25.927 138.901 62.940 1.00 44.31 O
ATOM 17 N3 U B 505 27.455 140.561 62.928 1.00 46.02 N
ATOM 18 C4 U B 505 27.862 141.878 62.841 1.00 46.54 C
ATOM 19 O4 U B 505 29.066 142.138 62.811 1.00 47.09 O
ATOM 20 C5 U B 505 26.801 142.822 62.699 1.00 46.09 C
ATOM 21 C6 U B 505 25.538 142.389 62.650 1.00 46.42 C
ATOM 22 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 23 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 24 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 25 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
TER
ATOM 2 P G A1278 19.426 129.077 63.287 1.00 40.31 P
ATOM 3 OP1 G A1278 19.964 127.770 63.714 1.00 39.64 O
ATOM 4 OP2 G A1278 18.026 129.425 63.574 1.00 40.01 O
ATOM 5 O5' G A1278 20.346 130.262 63.827 1.00 39.40 O
ATOM 6 C5' G A1278 21.771 130.257 63.572 1.00 38.49 C
ATOM 7 C4' G A1278 22.374 131.579 63.941 1.00 37.88 C
ATOM 8 O4' G A1278 21.708 132.613 63.185 1.00 38.54 O
ATOM 9 C3' G A1278 22.132 131.991 65.374 1.00 38.02 C
ATOM 10 O3' G A1278 23.083 131.406 66.229 1.00 37.43 O
ATOM 11 C2' G A1278 22.294 133.492 65.297 1.00 38.96 C
ATOM 12 O2' G A1278 23.662 133.819 65.170 1.00 39.04 O
ATOM 13 C1' G A1278 21.565 133.779 63.985 1.00 38.96 C
ATOM 14 N9 G A1278 20.135 134.030 64.185 1.00 38.78 N
ATOM 15 C8 G A1278 19.108 133.121 64.106 1.00 38.48 C
ATOM 16 N7 G A1278 17.936 133.652 64.327 1.00 38.92 N
ATOM 17 C5 G A1278 18.209 134.984 64.584 1.00 37.75 C
ATOM 18 C6 G A1278 17.345 136.054 64.896 1.00 38.28 C
ATOM 19 O6 G A1278 16.111 136.046 65.022 1.00 39.74 O
ATOM 20 N1 G A1278 18.049 137.240 65.066 1.00 38.38 N
ATOM 21 C2 G A1278 19.410 137.381 64.945 1.00 39.42 C
ATOM 22 N2 G A1278 19.922 138.624 65.150 1.00 39.62 N
ATOM 23 N3 G A1278 20.218 136.388 64.650 1.00 39.00 N
ATOM 24 C4 G A1278 19.560 135.232 64.491 1.00 38.08 C
ATOM 25 P U A1279 22.633 130.904 67.675 1.00 36.61 P
ATOM 26 OP1 U A1279 23.847 130.328 68.299 1.00 39.20 O
ATOM 27 OP2 U A1279 21.441 130.060 67.487 1.00 33.84 O
ATOM 28 O5' U A1279 22.310 132.261 68.433 1.00 35.58 O
TER
ATOM 1 O3' A B 504 23.256 146.022 61.390 1.00 46.07 O
ATOM 2 P U B 505 23.172 145.735 62.960 1.00 46.40 P
ATOM 3 OP1 U B 505 21.869 146.175 63.522 1.00 45.30 O
ATOM 4 OP2 U B 505 24.431 146.258 63.545 1.00 46.73 O
ATOM 5 O5' U B 505 23.075 144.155 63.017 1.00 44.62 O
ATOM 6 C5' U B 505 21.821 143.514 62.760 1.00 44.27 C
ATOM 7 C4' U B 505 21.976 142.026 62.855 1.00 44.46 C
ATOM 8 O4' U B 505 23.061 141.638 61.991 1.00 43.63 O
ATOM 9 C3' U B 505 22.375 141.536 64.235 1.00 43.42 C
ATOM 10 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 11 C2' U B 505 23.127 140.255 63.934 1.00 43.66 C
ATOM 12 O2' U B 505 22.222 139.193 63.736 1.00 44.66 O
ATOM 13 C1' U B 505 23.807 140.606 62.608 1.00 44.29 C
ATOM 14 N1 U B 505 25.202 141.050 62.719 1.00 45.02 N
ATOM 15 C2 U B 505 26.173 140.085 62.871 1.00 44.85 C
ATOM 16 O2 U B 505 25.927 138.901 62.940 1.00 44.31 O
ATOM 17 N3 U B 505 27.455 140.561 62.928 1.00 46.02 N
ATOM 18 C4 U B 505 27.862 141.878 62.841 1.00 46.54 C
ATOM 19 O4 U B 505 29.066 142.138 62.811 1.00 47.09 O
ATOM 20 C5 U B 505 26.801 142.822 62.699 1.00 46.09 C
ATOM 21 C6 U B 505 25.538 142.389 62.650 1.00 46.42 C
ATOM 22 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 23 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 24 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 25 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
TER
Atoms:
OP1: (19.964,127.770,63.714)
OP2: (18.026,129.425,63.574)
C3': (22.132,131.991,65.374)
C1': (21.565,133.779,63.985)
C5': (21.771,130.257,63.572)
O6: (16.111,136.046,65.022)
O4': (21.708,132.613,63.185)
C8: (19.108,133.121,64.106)
C2: (19.410,137.381,64.945)
C6: (17.345,136.054,64.896)
C5: (18.209,134.984,64.584)
C4: (19.560,135.232,64.491)
P: (19.426,129.077,63.287)
C4': (22.374,131.579,63.941)
C2': (22.294,133.492,65.297)
O2': (23.662,133.819,65.170)
N1: (18.049,137.240,65.066)
N2: (19.922,138.624,65.150)
N3: (20.218,136.388,64.650)
N7: (17.936,133.652,64.327)
N9: (20.135,134.030,64.185)
O5': (20.346,130.262,63.827)
O3': (23.083,131.406,66.229)
OP2: (18.026,129.425,63.574)
C3': (22.132,131.991,65.374)
C1': (21.565,133.779,63.985)
C5': (21.771,130.257,63.572)
O6: (16.111,136.046,65.022)
O4': (21.708,132.613,63.185)
C8: (19.108,133.121,64.106)
C2: (19.410,137.381,64.945)
C6: (17.345,136.054,64.896)
C5: (18.209,134.984,64.584)
C4: (19.560,135.232,64.491)
P: (19.426,129.077,63.287)
C4': (22.374,131.579,63.941)
C2': (22.294,133.492,65.297)
O2': (23.662,133.819,65.170)
N1: (18.049,137.240,65.066)
N2: (19.922,138.624,65.150)
N3: (20.218,136.388,64.650)
N7: (17.936,133.652,64.327)
N9: (20.135,134.030,64.185)
O5': (20.346,130.262,63.827)
O3': (23.083,131.406,66.229)
C4: (27.862,141.878,62.841)
N3: (27.455,140.561,62.928)
OP1: (21.869,146.175,63.522)
OP2: (24.431,146.258,63.545)
C2: (26.173,140.085,62.871)
C1': (23.807,140.606,62.608)
C3': (22.375,141.536,64.235)
O5': (23.075,144.155,63.017)
O4': (23.061,141.638,61.991)
C5': (21.821,143.514,62.760)
P: (23.172,145.735,62.960)
C4': (21.976,142.026,62.855)
C2': (23.127,140.255,63.934)
O2': (22.222,139.193,63.736)
N1: (25.202,141.050,62.719)
O4: (29.066,142.138,62.811)
O2: (25.927,138.901,62.940)
C6: (25.538,142.389,62.650)
C5: (26.801,142.822,62.699)
O3': (21.198,141.228,64.962)
N3: (27.455,140.561,62.928)
OP1: (21.869,146.175,63.522)
OP2: (24.431,146.258,63.545)
C2: (26.173,140.085,62.871)
C1': (23.807,140.606,62.608)
C3': (22.375,141.536,64.235)
O5': (23.075,144.155,63.017)
O4': (23.061,141.638,61.991)
C5': (21.821,143.514,62.760)
P: (23.172,145.735,62.960)
C4': (21.976,142.026,62.855)
C2': (23.127,140.255,63.934)
O2': (22.222,139.193,63.736)
N1: (25.202,141.050,62.719)
O4: (29.066,142.138,62.811)
O2: (25.927,138.901,62.940)
C6: (25.538,142.389,62.650)
C5: (26.801,142.822,62.699)
O3': (21.198,141.228,64.962)
Image (generated by PyMOL):