Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11061:1587
Extra
PDB:
ATOM 1 O3' G A1060 41.689 -19.760 55.389 1.00 32.02 O
ATOM 2 P G A1061 41.163 -21.126 54.786 1.00 30.16 P
ATOM 3 OP1 G A1061 39.817 -21.194 55.140 1.00 30.16 O
ATOM 4 OP2 G A1061 42.065 -22.244 55.194 1.00 30.22 O
ATOM 5 O5' G A1061 41.274 -20.915 53.236 1.00 30.27 O
ATOM 6 C5' G A1061 42.531 -20.954 52.609 1.00 30.31 C
ATOM 7 C4' G A1061 43.004 -19.562 52.376 1.00 30.22 C
ATOM 8 O4' G A1061 44.424 -19.491 52.519 1.00 30.20 O
ATOM 9 C3' G A1061 42.712 -18.980 51.003 1.00 30.31 C
ATOM 10 O3' G A1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 11 C2' G A1061 43.745 -17.891 50.914 1.00 30.24 C
ATOM 12 O2' G A1061 43.328 -16.796 51.703 1.00 30.10 O
ATOM 13 C1' G A1061 44.933 -18.557 51.608 1.00 30.22 C
ATOM 14 N9 G A1061 45.775 -19.282 50.671 1.00 30.36 N
ATOM 15 C8 G A1061 45.891 -20.613 50.605 1.00 30.47 C
ATOM 16 N7 G A1061 46.735 -20.919 49.689 1.00 30.59 N
ATOM 17 C5 G A1061 47.172 -19.729 49.164 1.00 30.55 C
ATOM 18 C6 G A1061 48.083 -19.443 48.162 1.00 30.65 C
ATOM 19 O6 G A1061 48.726 -20.227 47.492 1.00 30.80 O
ATOM 20 N1 G A1061 48.235 -18.112 47.947 1.00 30.58 N
ATOM 21 C2 G A1061 47.603 -17.146 48.646 1.00 30.44 C
ATOM 22 N2 G A1061 47.888 -15.892 48.306 1.00 30.41 N
ATOM 23 N3 G A1061 46.747 -17.390 49.606 1.00 30.34 N
ATOM 24 C4 G A1061 46.597 -18.702 49.786 1.00 30.41 C
ATOM 25 P C A1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 26 OP1 C A1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 27 OP2 C A1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 28 O5' C A1062 41.269 -17.585 48.583 1.00 28.41 O
TER
ATOM 1 O3' U B 586 44.916 -12.990 56.264 1.00 33.60 O
ATOM 2 P U B 587 45.340 -14.360 55.596 1.00 32.72 P
ATOM 3 OP1 U B 587 44.304 -15.324 55.852 1.00 32.74 O
ATOM 4 OP2 U B 587 46.689 -14.639 56.057 1.00 32.72 O
ATOM 5 O5' U B 587 45.393 -14.021 54.057 1.00 32.81 O
ATOM 6 C5' U B 587 46.334 -14.695 53.258 1.00 32.90 C
ATOM 7 C4' U B 587 46.268 -14.257 51.849 1.00 33.00 C
ATOM 8 O4' U B 587 44.924 -14.294 51.449 1.00 33.03 O
ATOM 9 C3' U B 587 46.684 -12.843 51.594 1.00 32.97 C
ATOM 10 O3' U B 587 48.072 -12.710 51.509 1.00 32.99 O
ATOM 11 C2' U B 587 45.981 -12.536 50.316 1.00 33.07 C
ATOM 12 O2' U B 587 46.661 -13.139 49.250 1.00 33.20 O
ATOM 13 C1' U B 587 44.668 -13.280 50.539 1.00 33.07 C
ATOM 14 N1 U B 587 43.621 -12.404 51.105 1.00 33.00 N
ATOM 15 C2 U B 587 42.938 -11.805 50.145 1.00 33.07 C
ATOM 16 O2 U B 587 43.191 -12.071 48.974 1.00 33.20 O
ATOM 17 N3 U B 587 42.001 -10.936 50.615 1.00 33.02 N
ATOM 18 C4 U B 587 41.682 -10.656 51.912 1.00 32.90 C
ATOM 19 O4 U B 587 40.785 -9.843 52.103 1.00 32.89 O
ATOM 20 C5 U B 587 42.421 -11.342 52.898 1.00 32.82 C
ATOM 21 C6 U B 587 43.357 -12.165 52.436 1.00 32.87 C
ATOM 22 P G B 588 48.806 -11.581 52.319 1.00 34.98 P
ATOM 23 OP1 G B 588 50.240 -11.778 52.151 1.00 35.03 O
ATOM 24 OP2 G B 588 48.269 -11.561 53.659 1.00 34.87 O
ATOM 25 O5' G B 588 48.361 -10.310 51.542 1.00 35.01 O
TER
ATOM 2 P G A1061 41.163 -21.126 54.786 1.00 30.16 P
ATOM 3 OP1 G A1061 39.817 -21.194 55.140 1.00 30.16 O
ATOM 4 OP2 G A1061 42.065 -22.244 55.194 1.00 30.22 O
ATOM 5 O5' G A1061 41.274 -20.915 53.236 1.00 30.27 O
ATOM 6 C5' G A1061 42.531 -20.954 52.609 1.00 30.31 C
ATOM 7 C4' G A1061 43.004 -19.562 52.376 1.00 30.22 C
ATOM 8 O4' G A1061 44.424 -19.491 52.519 1.00 30.20 O
ATOM 9 C3' G A1061 42.712 -18.980 51.003 1.00 30.31 C
ATOM 10 O3' G A1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 11 C2' G A1061 43.745 -17.891 50.914 1.00 30.24 C
ATOM 12 O2' G A1061 43.328 -16.796 51.703 1.00 30.10 O
ATOM 13 C1' G A1061 44.933 -18.557 51.608 1.00 30.22 C
ATOM 14 N9 G A1061 45.775 -19.282 50.671 1.00 30.36 N
ATOM 15 C8 G A1061 45.891 -20.613 50.605 1.00 30.47 C
ATOM 16 N7 G A1061 46.735 -20.919 49.689 1.00 30.59 N
ATOM 17 C5 G A1061 47.172 -19.729 49.164 1.00 30.55 C
ATOM 18 C6 G A1061 48.083 -19.443 48.162 1.00 30.65 C
ATOM 19 O6 G A1061 48.726 -20.227 47.492 1.00 30.80 O
ATOM 20 N1 G A1061 48.235 -18.112 47.947 1.00 30.58 N
ATOM 21 C2 G A1061 47.603 -17.146 48.646 1.00 30.44 C
ATOM 22 N2 G A1061 47.888 -15.892 48.306 1.00 30.41 N
ATOM 23 N3 G A1061 46.747 -17.390 49.606 1.00 30.34 N
ATOM 24 C4 G A1061 46.597 -18.702 49.786 1.00 30.41 C
ATOM 25 P C A1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 26 OP1 C A1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 27 OP2 C A1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 28 O5' C A1062 41.269 -17.585 48.583 1.00 28.41 O
TER
ATOM 1 O3' U B 586 44.916 -12.990 56.264 1.00 33.60 O
ATOM 2 P U B 587 45.340 -14.360 55.596 1.00 32.72 P
ATOM 3 OP1 U B 587 44.304 -15.324 55.852 1.00 32.74 O
ATOM 4 OP2 U B 587 46.689 -14.639 56.057 1.00 32.72 O
ATOM 5 O5' U B 587 45.393 -14.021 54.057 1.00 32.81 O
ATOM 6 C5' U B 587 46.334 -14.695 53.258 1.00 32.90 C
ATOM 7 C4' U B 587 46.268 -14.257 51.849 1.00 33.00 C
ATOM 8 O4' U B 587 44.924 -14.294 51.449 1.00 33.03 O
ATOM 9 C3' U B 587 46.684 -12.843 51.594 1.00 32.97 C
ATOM 10 O3' U B 587 48.072 -12.710 51.509 1.00 32.99 O
ATOM 11 C2' U B 587 45.981 -12.536 50.316 1.00 33.07 C
ATOM 12 O2' U B 587 46.661 -13.139 49.250 1.00 33.20 O
ATOM 13 C1' U B 587 44.668 -13.280 50.539 1.00 33.07 C
ATOM 14 N1 U B 587 43.621 -12.404 51.105 1.00 33.00 N
ATOM 15 C2 U B 587 42.938 -11.805 50.145 1.00 33.07 C
ATOM 16 O2 U B 587 43.191 -12.071 48.974 1.00 33.20 O
ATOM 17 N3 U B 587 42.001 -10.936 50.615 1.00 33.02 N
ATOM 18 C4 U B 587 41.682 -10.656 51.912 1.00 32.90 C
ATOM 19 O4 U B 587 40.785 -9.843 52.103 1.00 32.89 O
ATOM 20 C5 U B 587 42.421 -11.342 52.898 1.00 32.82 C
ATOM 21 C6 U B 587 43.357 -12.165 52.436 1.00 32.87 C
ATOM 22 P G B 588 48.806 -11.581 52.319 1.00 34.98 P
ATOM 23 OP1 G B 588 50.240 -11.778 52.151 1.00 35.03 O
ATOM 24 OP2 G B 588 48.269 -11.561 53.659 1.00 34.87 O
ATOM 25 O5' G B 588 48.361 -10.310 51.542 1.00 35.01 O
TER
Atoms:
OP1: (39.817,-21.194,55.140)
OP2: (42.065,-22.244,55.194)
C3': (42.712,-18.980,51.003)
C1': (44.933,-18.557,51.608)
C5': (42.531,-20.954,52.609)
O6: (48.726,-20.227,47.492)
O4': (44.424,-19.491,52.519)
C8: (45.891,-20.613,50.605)
C2: (47.603,-17.146,48.646)
C6: (48.083,-19.443,48.162)
C5: (47.172,-19.729,49.164)
C4: (46.597,-18.702,49.786)
P: (41.163,-21.126,54.786)
C4': (43.004,-19.562,52.376)
C2': (43.745,-17.891,50.914)
O2': (43.328,-16.796,51.703)
N1: (48.235,-18.112,47.947)
N2: (47.888,-15.892,48.306)
N3: (46.747,-17.390,49.606)
N7: (46.735,-20.919,49.689)
N9: (45.775,-19.282,50.671)
O5': (41.274,-20.915,53.236)
O3': (41.395,-18.472,50.942)
OP2: (42.065,-22.244,55.194)
C3': (42.712,-18.980,51.003)
C1': (44.933,-18.557,51.608)
C5': (42.531,-20.954,52.609)
O6: (48.726,-20.227,47.492)
O4': (44.424,-19.491,52.519)
C8: (45.891,-20.613,50.605)
C2: (47.603,-17.146,48.646)
C6: (48.083,-19.443,48.162)
C5: (47.172,-19.729,49.164)
C4: (46.597,-18.702,49.786)
P: (41.163,-21.126,54.786)
C4': (43.004,-19.562,52.376)
C2': (43.745,-17.891,50.914)
O2': (43.328,-16.796,51.703)
N1: (48.235,-18.112,47.947)
N2: (47.888,-15.892,48.306)
N3: (46.747,-17.390,49.606)
N7: (46.735,-20.919,49.689)
N9: (45.775,-19.282,50.671)
O5': (41.274,-20.915,53.236)
O3': (41.395,-18.472,50.942)
C4: (41.682,-10.656,51.912)
N3: (42.001,-10.936,50.615)
OP1: (44.304,-15.324,55.852)
OP2: (46.689,-14.639,56.057)
C2: (42.938,-11.805,50.145)
C1': (44.668,-13.280,50.539)
C3': (46.684,-12.843,51.594)
O5': (45.393,-14.021,54.057)
O4': (44.924,-14.294,51.449)
C5': (46.334,-14.695,53.258)
P: (45.340,-14.360,55.596)
C4': (46.268,-14.257,51.849)
C2': (45.981,-12.536,50.316)
O2': (46.661,-13.139,49.250)
N1: (43.621,-12.404,51.105)
O4: (40.785,-9.843,52.103)
O2: (43.191,-12.071,48.974)
C6: (43.357,-12.165,52.436)
C5: (42.421,-11.342,52.898)
O3': (48.072,-12.710,51.509)
N3: (42.001,-10.936,50.615)
OP1: (44.304,-15.324,55.852)
OP2: (46.689,-14.639,56.057)
C2: (42.938,-11.805,50.145)
C1': (44.668,-13.280,50.539)
C3': (46.684,-12.843,51.594)
O5': (45.393,-14.021,54.057)
O4': (44.924,-14.294,51.449)
C5': (46.334,-14.695,53.258)
P: (45.340,-14.360,55.596)
C4': (46.268,-14.257,51.849)
C2': (45.981,-12.536,50.316)
O2': (46.661,-13.139,49.250)
N1: (43.621,-12.404,51.105)
O4: (40.785,-9.843,52.103)
O2: (43.191,-12.071,48.974)
C6: (43.357,-12.165,52.436)
C5: (42.421,-11.342,52.898)
O3': (48.072,-12.710,51.509)
Image (generated by PyMOL):