Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1612:11054
Extra
PDB:
ATOM 1 O3' C A 611 64.180 -39.320 79.377 1.00 47.99 O
ATOM 2 P G A 612 65.456 -39.861 78.609 1.00 37.18 P
ATOM 3 OP1 G A 612 65.580 -41.301 78.944 1.00 37.52 O
ATOM 4 OP2 G A 612 66.578 -38.941 78.916 1.00 37.17 O
ATOM 5 O5' G A 612 65.016 -39.695 77.065 1.00 36.97 O
ATOM 6 C5' G A 612 63.736 -40.093 76.614 1.00 36.86 C
ATOM 7 C4' G A 612 63.519 -39.663 75.202 1.00 36.65 C
ATOM 8 O4' G A 612 63.145 -38.280 75.194 1.00 36.34 O
ATOM 9 C3' G A 612 64.737 -39.686 74.322 1.00 36.74 C
ATOM 10 O3' G A 612 65.050 -40.979 73.842 1.00 37.01 O
ATOM 11 C2' G A 612 64.383 -38.679 73.234 1.00 36.43 C
ATOM 12 O2' G A 612 63.477 -39.244 72.331 1.00 36.39 O
ATOM 13 C1' G A 612 63.627 -37.640 74.038 1.00 36.20 C
ATOM 14 N9 G A 612 64.486 -36.530 74.450 1.00 36.12 N
ATOM 15 C8 G A 612 65.078 -36.371 75.671 1.00 36.24 C
ATOM 16 N7 G A 612 65.818 -35.306 75.695 1.00 36.15 N
ATOM 17 C5 G A 612 65.704 -34.761 74.430 1.00 35.95 C
ATOM 18 C6 G A 612 66.291 -33.617 73.863 1.00 35.80 C
ATOM 19 O6 G A 612 67.062 -32.811 74.377 1.00 35.80 O
ATOM 20 N1 G A 612 65.900 -33.430 72.564 1.00 35.64 N
ATOM 21 C2 G A 612 65.059 -34.259 71.878 1.00 35.65 C
ATOM 22 N2 G A 612 64.775 -33.930 70.579 1.00 35.50 N
ATOM 23 N3 G A 612 64.555 -35.345 72.416 1.00 35.80 N
ATOM 24 C4 G A 612 64.899 -35.518 73.665 1.00 35.94 C
ATOM 25 P U A 613 66.571 -41.377 73.569 1.00 44.94 P
ATOM 26 OP1 U A 613 66.609 -42.798 73.225 1.00 45.23 O
ATOM 27 OP2 U A 613 67.353 -40.925 74.740 1.00 45.01 O
ATOM 28 O5' U A 613 66.912 -40.499 72.310 1.00 44.73 O
TER
ATOM 1 O3' U B1053 64.195 -41.009 66.302 1.00 35.78 O
ATOM 2 P U B1054 62.724 -40.395 66.523 1.00 39.10 P
ATOM 3 OP1 U B1054 62.203 -40.923 67.819 1.00 39.17 O
ATOM 4 OP2 U B1054 61.980 -40.649 65.287 1.00 39.07 O
ATOM 5 O5' U B1054 62.978 -38.846 66.654 1.00 38.82 O
ATOM 6 C5' U B1054 63.716 -38.322 67.727 1.00 38.81 C
ATOM 7 C4' U B1054 64.332 -37.033 67.346 1.00 38.63 C
ATOM 8 O4' U B1054 65.002 -37.186 66.084 1.00 38.71 O
ATOM 9 C3' U B1054 63.369 -35.908 67.074 1.00 38.31 C
ATOM 10 O3' U B1054 62.859 -35.319 68.250 1.00 38.18 O
ATOM 11 C2' U B1054 64.210 -34.963 66.261 1.00 38.23 C
ATOM 12 O2' U B1054 65.025 -34.229 67.129 1.00 38.20 O
ATOM 13 C1' U B1054 65.093 -35.931 65.463 1.00 38.49 C
ATOM 14 N1 U B1054 64.656 -36.069 64.061 1.00 38.46 N
ATOM 15 C2 U B1054 64.895 -35.046 63.129 1.00 38.31 C
ATOM 16 O2 U B1054 65.478 -33.995 63.402 1.00 38.19 O
ATOM 17 N3 U B1054 64.409 -35.340 61.879 1.00 38.32 N
ATOM 18 C4 U B1054 63.754 -36.512 61.527 1.00 38.47 C
ATOM 19 O4 U B1054 63.369 -36.675 60.390 1.00 38.49 O
ATOM 20 C5 U B1054 63.545 -37.502 62.506 1.00 38.62 C
ATOM 21 C6 U B1054 64.008 -37.239 63.713 1.00 38.60 C
ATOM 22 P U B1055 61.297 -34.949 68.324 1.00 36.93 P
ATOM 23 OP1 U B1055 60.943 -34.862 69.752 1.00 36.92 O
ATOM 24 OP2 U B1055 60.580 -35.904 67.445 1.00 37.01 O
ATOM 25 O5' U B1055 61.259 -33.507 67.702 1.00 36.68 O
TER
ATOM 2 P G A 612 65.456 -39.861 78.609 1.00 37.18 P
ATOM 3 OP1 G A 612 65.580 -41.301 78.944 1.00 37.52 O
ATOM 4 OP2 G A 612 66.578 -38.941 78.916 1.00 37.17 O
ATOM 5 O5' G A 612 65.016 -39.695 77.065 1.00 36.97 O
ATOM 6 C5' G A 612 63.736 -40.093 76.614 1.00 36.86 C
ATOM 7 C4' G A 612 63.519 -39.663 75.202 1.00 36.65 C
ATOM 8 O4' G A 612 63.145 -38.280 75.194 1.00 36.34 O
ATOM 9 C3' G A 612 64.737 -39.686 74.322 1.00 36.74 C
ATOM 10 O3' G A 612 65.050 -40.979 73.842 1.00 37.01 O
ATOM 11 C2' G A 612 64.383 -38.679 73.234 1.00 36.43 C
ATOM 12 O2' G A 612 63.477 -39.244 72.331 1.00 36.39 O
ATOM 13 C1' G A 612 63.627 -37.640 74.038 1.00 36.20 C
ATOM 14 N9 G A 612 64.486 -36.530 74.450 1.00 36.12 N
ATOM 15 C8 G A 612 65.078 -36.371 75.671 1.00 36.24 C
ATOM 16 N7 G A 612 65.818 -35.306 75.695 1.00 36.15 N
ATOM 17 C5 G A 612 65.704 -34.761 74.430 1.00 35.95 C
ATOM 18 C6 G A 612 66.291 -33.617 73.863 1.00 35.80 C
ATOM 19 O6 G A 612 67.062 -32.811 74.377 1.00 35.80 O
ATOM 20 N1 G A 612 65.900 -33.430 72.564 1.00 35.64 N
ATOM 21 C2 G A 612 65.059 -34.259 71.878 1.00 35.65 C
ATOM 22 N2 G A 612 64.775 -33.930 70.579 1.00 35.50 N
ATOM 23 N3 G A 612 64.555 -35.345 72.416 1.00 35.80 N
ATOM 24 C4 G A 612 64.899 -35.518 73.665 1.00 35.94 C
ATOM 25 P U A 613 66.571 -41.377 73.569 1.00 44.94 P
ATOM 26 OP1 U A 613 66.609 -42.798 73.225 1.00 45.23 O
ATOM 27 OP2 U A 613 67.353 -40.925 74.740 1.00 45.01 O
ATOM 28 O5' U A 613 66.912 -40.499 72.310 1.00 44.73 O
TER
ATOM 1 O3' U B1053 64.195 -41.009 66.302 1.00 35.78 O
ATOM 2 P U B1054 62.724 -40.395 66.523 1.00 39.10 P
ATOM 3 OP1 U B1054 62.203 -40.923 67.819 1.00 39.17 O
ATOM 4 OP2 U B1054 61.980 -40.649 65.287 1.00 39.07 O
ATOM 5 O5' U B1054 62.978 -38.846 66.654 1.00 38.82 O
ATOM 6 C5' U B1054 63.716 -38.322 67.727 1.00 38.81 C
ATOM 7 C4' U B1054 64.332 -37.033 67.346 1.00 38.63 C
ATOM 8 O4' U B1054 65.002 -37.186 66.084 1.00 38.71 O
ATOM 9 C3' U B1054 63.369 -35.908 67.074 1.00 38.31 C
ATOM 10 O3' U B1054 62.859 -35.319 68.250 1.00 38.18 O
ATOM 11 C2' U B1054 64.210 -34.963 66.261 1.00 38.23 C
ATOM 12 O2' U B1054 65.025 -34.229 67.129 1.00 38.20 O
ATOM 13 C1' U B1054 65.093 -35.931 65.463 1.00 38.49 C
ATOM 14 N1 U B1054 64.656 -36.069 64.061 1.00 38.46 N
ATOM 15 C2 U B1054 64.895 -35.046 63.129 1.00 38.31 C
ATOM 16 O2 U B1054 65.478 -33.995 63.402 1.00 38.19 O
ATOM 17 N3 U B1054 64.409 -35.340 61.879 1.00 38.32 N
ATOM 18 C4 U B1054 63.754 -36.512 61.527 1.00 38.47 C
ATOM 19 O4 U B1054 63.369 -36.675 60.390 1.00 38.49 O
ATOM 20 C5 U B1054 63.545 -37.502 62.506 1.00 38.62 C
ATOM 21 C6 U B1054 64.008 -37.239 63.713 1.00 38.60 C
ATOM 22 P U B1055 61.297 -34.949 68.324 1.00 36.93 P
ATOM 23 OP1 U B1055 60.943 -34.862 69.752 1.00 36.92 O
ATOM 24 OP2 U B1055 60.580 -35.904 67.445 1.00 37.01 O
ATOM 25 O5' U B1055 61.259 -33.507 67.702 1.00 36.68 O
TER
Atoms:
OP1: (65.580,-41.301,78.944)
OP2: (66.578,-38.941,78.916)
C3': (64.737,-39.686,74.322)
C1': (63.627,-37.640,74.038)
C5': (63.736,-40.093,76.614)
O6: (67.062,-32.811,74.377)
O4': (63.145,-38.280,75.194)
C8: (65.078,-36.371,75.671)
C2: (65.059,-34.259,71.878)
C6: (66.291,-33.617,73.863)
C5: (65.704,-34.761,74.430)
C4: (64.899,-35.518,73.665)
P: (65.456,-39.861,78.609)
C4': (63.519,-39.663,75.202)
C2': (64.383,-38.679,73.234)
O2': (63.477,-39.244,72.331)
N1: (65.900,-33.430,72.564)
N2: (64.775,-33.930,70.579)
N3: (64.555,-35.345,72.416)
N7: (65.818,-35.306,75.695)
N9: (64.486,-36.530,74.450)
O5': (65.016,-39.695,77.065)
O3': (65.050,-40.979,73.842)
OP2: (66.578,-38.941,78.916)
C3': (64.737,-39.686,74.322)
C1': (63.627,-37.640,74.038)
C5': (63.736,-40.093,76.614)
O6: (67.062,-32.811,74.377)
O4': (63.145,-38.280,75.194)
C8: (65.078,-36.371,75.671)
C2: (65.059,-34.259,71.878)
C6: (66.291,-33.617,73.863)
C5: (65.704,-34.761,74.430)
C4: (64.899,-35.518,73.665)
P: (65.456,-39.861,78.609)
C4': (63.519,-39.663,75.202)
C2': (64.383,-38.679,73.234)
O2': (63.477,-39.244,72.331)
N1: (65.900,-33.430,72.564)
N2: (64.775,-33.930,70.579)
N3: (64.555,-35.345,72.416)
N7: (65.818,-35.306,75.695)
N9: (64.486,-36.530,74.450)
O5': (65.016,-39.695,77.065)
O3': (65.050,-40.979,73.842)
C4: (63.754,-36.512,61.527)
N3: (64.409,-35.340,61.879)
OP1: (62.203,-40.923,67.819)
OP2: (61.980,-40.649,65.287)
C2: (64.895,-35.046,63.129)
C1': (65.093,-35.931,65.463)
C3': (63.369,-35.908,67.074)
O5': (62.978,-38.846,66.654)
O4': (65.002,-37.186,66.084)
C5': (63.716,-38.322,67.727)
P: (62.724,-40.395,66.523)
C4': (64.332,-37.033,67.346)
C2': (64.210,-34.963,66.261)
O2': (65.025,-34.229,67.129)
N1: (64.656,-36.069,64.061)
O4: (63.369,-36.675,60.390)
O2: (65.478,-33.995,63.402)
C6: (64.008,-37.239,63.713)
C5: (63.545,-37.502,62.506)
O3': (62.859,-35.319,68.250)
N3: (64.409,-35.340,61.879)
OP1: (62.203,-40.923,67.819)
OP2: (61.980,-40.649,65.287)
C2: (64.895,-35.046,63.129)
C1': (65.093,-35.931,65.463)
C3': (63.369,-35.908,67.074)
O5': (62.978,-38.846,66.654)
O4': (65.002,-37.186,66.084)
C5': (63.716,-38.322,67.727)
P: (62.724,-40.395,66.523)
C4': (64.332,-37.033,67.346)
C2': (64.210,-34.963,66.261)
O2': (65.025,-34.229,67.129)
N1: (64.656,-36.069,64.061)
O4: (63.369,-36.675,60.390)
O2: (65.478,-33.995,63.402)
C6: (64.008,-37.239,63.713)
C5: (63.545,-37.502,62.506)
O3': (62.859,-35.319,68.250)
Image (generated by PyMOL):