Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1925:A1281
Extra
PDB:
ATOM 1 O3' G A1924 43.117 -87.050 2.550 1.00 35.04 O
ATOM 2 P G A1925 43.950 -87.051 1.157 1.00 39.56 P
ATOM 3 OP1 G A1925 43.712 -88.300 0.380 1.00 32.30 O
ATOM 4 OP2 G A1925 45.335 -86.662 1.514 1.00 43.31 O
ATOM 5 O5' G A1925 43.397 -85.833 0.291 1.00 40.10 O
ATOM 6 C5' G A1925 42.460 -86.098 -0.740 1.00 39.58 C
ATOM 7 C4' G A1925 41.961 -84.832 -1.390 1.00 42.53 C
ATOM 8 O4' G A1925 41.672 -83.818 -0.389 1.00 47.57 O
ATOM 9 C3' G A1925 42.913 -84.136 -2.328 1.00 43.70 C
ATOM 10 O3' G A1925 42.923 -84.777 -3.583 1.00 39.21 O
ATOM 11 C2' G A1925 42.341 -82.731 -2.392 1.00 47.06 C
ATOM 12 O2' G A1925 41.246 -82.685 -3.280 1.00 49.41 O
ATOM 13 C1' G A1925 41.882 -82.521 -0.945 1.00 51.39 C
ATOM 14 N9 G A1925 42.955 -81.865 -0.205 1.00 50.09 N
ATOM 15 C8 G A1925 43.758 -82.427 0.758 1.00 52.33 C
ATOM 16 N7 G A1925 44.728 -81.641 1.137 1.00 54.96 N
ATOM 17 C5 G A1925 44.540 -80.484 0.405 1.00 47.13 C
ATOM 18 C6 G A1925 45.304 -79.318 0.361 1.00 45.96 C
ATOM 19 O6 G A1925 46.359 -79.068 0.970 1.00 47.11 O
ATOM 20 N1 G A1925 44.759 -78.390 -0.514 1.00 46.38 N
ATOM 21 C2 G A1925 43.628 -78.577 -1.265 1.00 48.49 C
ATOM 22 N2 G A1925 43.273 -77.563 -2.056 1.00 42.87 N
ATOM 23 N3 G A1925 42.908 -79.675 -1.243 1.00 47.41 N
ATOM 24 C4 G A1925 43.422 -80.586 -0.397 1.00 46.36 C
ATOM 25 P U A1926 44.332 -85.066 -4.280 1.00 45.05 P
ATOM 26 OP1 U A1926 44.108 -86.107 -5.331 1.00 36.15 O
ATOM 27 OP2 U A1926 45.287 -85.346 -3.158 1.00 36.94 O
ATOM 28 O5' U A1926 44.653 -83.657 -4.966 1.00 33.79 O
TER
ATOM 1 O3' G B1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 2 P U B1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 3 OP1 U B1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 4 OP2 U B1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 5 O5' U B1281 40.810 -76.753 -6.371 1.00 41.45 O
ATOM 6 C5' U B1281 41.843 -77.591 -5.859 1.00 45.07 C
ATOM 7 C4' U B1281 41.272 -78.557 -4.861 1.00 46.97 C
ATOM 8 O4' U B1281 40.867 -77.872 -3.649 1.00 46.18 O
ATOM 9 C3' U B1281 40.008 -79.232 -5.361 1.00 42.57 C
ATOM 10 O3' U B1281 40.388 -80.330 -6.171 1.00 38.39 O
ATOM 11 C2' U B1281 39.280 -79.590 -4.071 1.00 45.17 C
ATOM 12 O2' U B1281 39.797 -80.739 -3.453 1.00 39.58 O
ATOM 13 C1' U B1281 39.648 -78.417 -3.167 1.00 43.75 C
ATOM 14 N1 U B1281 38.653 -77.345 -3.213 1.00 42.79 N
ATOM 15 C2 U B1281 37.475 -77.468 -2.485 1.00 46.33 C
ATOM 16 O2 U B1281 37.181 -78.469 -1.844 1.00 50.91 O
ATOM 17 N3 U B1281 36.647 -76.368 -2.550 1.00 46.62 N
ATOM 18 C4 U B1281 36.866 -75.205 -3.269 1.00 50.25 C
ATOM 19 O4 U B1281 36.043 -74.285 -3.225 1.00 46.66 O
ATOM 20 C5 U B1281 38.088 -75.194 -4.016 1.00 53.26 C
ATOM 21 C6 U B1281 38.912 -76.241 -3.963 1.00 42.57 C
ATOM 22 P C B1282 39.274 -81.068 -7.034 1.00 53.13 P
ATOM 23 OP1 C B1282 39.909 -82.070 -7.930 1.00 42.91 O
ATOM 24 OP2 C B1282 38.392 -80.003 -7.625 1.00 47.36 O
ATOM 25 O5' C B1282 38.468 -81.837 -5.902 1.00 44.47 O
TER
ATOM 2 P G A1925 43.950 -87.051 1.157 1.00 39.56 P
ATOM 3 OP1 G A1925 43.712 -88.300 0.380 1.00 32.30 O
ATOM 4 OP2 G A1925 45.335 -86.662 1.514 1.00 43.31 O
ATOM 5 O5' G A1925 43.397 -85.833 0.291 1.00 40.10 O
ATOM 6 C5' G A1925 42.460 -86.098 -0.740 1.00 39.58 C
ATOM 7 C4' G A1925 41.961 -84.832 -1.390 1.00 42.53 C
ATOM 8 O4' G A1925 41.672 -83.818 -0.389 1.00 47.57 O
ATOM 9 C3' G A1925 42.913 -84.136 -2.328 1.00 43.70 C
ATOM 10 O3' G A1925 42.923 -84.777 -3.583 1.00 39.21 O
ATOM 11 C2' G A1925 42.341 -82.731 -2.392 1.00 47.06 C
ATOM 12 O2' G A1925 41.246 -82.685 -3.280 1.00 49.41 O
ATOM 13 C1' G A1925 41.882 -82.521 -0.945 1.00 51.39 C
ATOM 14 N9 G A1925 42.955 -81.865 -0.205 1.00 50.09 N
ATOM 15 C8 G A1925 43.758 -82.427 0.758 1.00 52.33 C
ATOM 16 N7 G A1925 44.728 -81.641 1.137 1.00 54.96 N
ATOM 17 C5 G A1925 44.540 -80.484 0.405 1.00 47.13 C
ATOM 18 C6 G A1925 45.304 -79.318 0.361 1.00 45.96 C
ATOM 19 O6 G A1925 46.359 -79.068 0.970 1.00 47.11 O
ATOM 20 N1 G A1925 44.759 -78.390 -0.514 1.00 46.38 N
ATOM 21 C2 G A1925 43.628 -78.577 -1.265 1.00 48.49 C
ATOM 22 N2 G A1925 43.273 -77.563 -2.056 1.00 42.87 N
ATOM 23 N3 G A1925 42.908 -79.675 -1.243 1.00 47.41 N
ATOM 24 C4 G A1925 43.422 -80.586 -0.397 1.00 46.36 C
ATOM 25 P U A1926 44.332 -85.066 -4.280 1.00 45.05 P
ATOM 26 OP1 U A1926 44.108 -86.107 -5.331 1.00 36.15 O
ATOM 27 OP2 U A1926 45.287 -85.346 -3.158 1.00 36.94 O
ATOM 28 O5' U A1926 44.653 -83.657 -4.966 1.00 33.79 O
TER
ATOM 1 O3' G B1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 2 P U B1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 3 OP1 U B1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 4 OP2 U B1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 5 O5' U B1281 40.810 -76.753 -6.371 1.00 41.45 O
ATOM 6 C5' U B1281 41.843 -77.591 -5.859 1.00 45.07 C
ATOM 7 C4' U B1281 41.272 -78.557 -4.861 1.00 46.97 C
ATOM 8 O4' U B1281 40.867 -77.872 -3.649 1.00 46.18 O
ATOM 9 C3' U B1281 40.008 -79.232 -5.361 1.00 42.57 C
ATOM 10 O3' U B1281 40.388 -80.330 -6.171 1.00 38.39 O
ATOM 11 C2' U B1281 39.280 -79.590 -4.071 1.00 45.17 C
ATOM 12 O2' U B1281 39.797 -80.739 -3.453 1.00 39.58 O
ATOM 13 C1' U B1281 39.648 -78.417 -3.167 1.00 43.75 C
ATOM 14 N1 U B1281 38.653 -77.345 -3.213 1.00 42.79 N
ATOM 15 C2 U B1281 37.475 -77.468 -2.485 1.00 46.33 C
ATOM 16 O2 U B1281 37.181 -78.469 -1.844 1.00 50.91 O
ATOM 17 N3 U B1281 36.647 -76.368 -2.550 1.00 46.62 N
ATOM 18 C4 U B1281 36.866 -75.205 -3.269 1.00 50.25 C
ATOM 19 O4 U B1281 36.043 -74.285 -3.225 1.00 46.66 O
ATOM 20 C5 U B1281 38.088 -75.194 -4.016 1.00 53.26 C
ATOM 21 C6 U B1281 38.912 -76.241 -3.963 1.00 42.57 C
ATOM 22 P C B1282 39.274 -81.068 -7.034 1.00 53.13 P
ATOM 23 OP1 C B1282 39.909 -82.070 -7.930 1.00 42.91 O
ATOM 24 OP2 C B1282 38.392 -80.003 -7.625 1.00 47.36 O
ATOM 25 O5' C B1282 38.468 -81.837 -5.902 1.00 44.47 O
TER
Atoms:
OP1: (43.712,-88.300,0.380)
OP2: (45.335,-86.662,1.514)
C3': (42.913,-84.136,-2.328)
C1': (41.882,-82.521,-0.945)
C5': (42.460,-86.098,-0.740)
O6: (46.359,-79.068,0.970)
O4': (41.672,-83.818,-0.389)
C8: (43.758,-82.427,0.758)
C2: (43.628,-78.577,-1.265)
C6: (45.304,-79.318,0.361)
C5: (44.540,-80.484,0.405)
C4: (43.422,-80.586,-0.397)
P: (43.950,-87.051,1.157)
C4': (41.961,-84.832,-1.390)
C2': (42.341,-82.731,-2.392)
O2': (41.246,-82.685,-3.280)
N1: (44.759,-78.390,-0.514)
N2: (43.273,-77.563,-2.056)
N3: (42.908,-79.675,-1.243)
N7: (44.728,-81.641,1.137)
N9: (42.955,-81.865,-0.205)
O5': (43.397,-85.833,0.291)
O3': (42.923,-84.777,-3.583)
OP2: (45.335,-86.662,1.514)
C3': (42.913,-84.136,-2.328)
C1': (41.882,-82.521,-0.945)
C5': (42.460,-86.098,-0.740)
O6: (46.359,-79.068,0.970)
O4': (41.672,-83.818,-0.389)
C8: (43.758,-82.427,0.758)
C2: (43.628,-78.577,-1.265)
C6: (45.304,-79.318,0.361)
C5: (44.540,-80.484,0.405)
C4: (43.422,-80.586,-0.397)
P: (43.950,-87.051,1.157)
C4': (41.961,-84.832,-1.390)
C2': (42.341,-82.731,-2.392)
O2': (41.246,-82.685,-3.280)
N1: (44.759,-78.390,-0.514)
N2: (43.273,-77.563,-2.056)
N3: (42.908,-79.675,-1.243)
N7: (44.728,-81.641,1.137)
N9: (42.955,-81.865,-0.205)
O5': (43.397,-85.833,0.291)
O3': (42.923,-84.777,-3.583)
C4: (36.866,-75.205,-3.269)
N3: (36.647,-76.368,-2.550)
OP1: (41.225,-77.748,-8.622)
OP2: (39.109,-76.404,-8.136)
C2: (37.475,-77.468,-2.485)
C1': (39.648,-78.417,-3.167)
C3': (40.008,-79.232,-5.361)
O5': (40.810,-76.753,-6.371)
O4': (40.867,-77.872,-3.649)
C5': (41.843,-77.591,-5.859)
P: (40.569,-76.611,-7.942)
C4': (41.272,-78.557,-4.861)
C2': (39.280,-79.590,-4.071)
O2': (39.797,-80.739,-3.453)
N1: (38.653,-77.345,-3.213)
O4: (36.043,-74.285,-3.225)
O2: (37.181,-78.469,-1.844)
C6: (38.912,-76.241,-3.963)
C5: (38.088,-75.194,-4.016)
O3': (40.388,-80.330,-6.171)
N3: (36.647,-76.368,-2.550)
OP1: (41.225,-77.748,-8.622)
OP2: (39.109,-76.404,-8.136)
C2: (37.475,-77.468,-2.485)
C1': (39.648,-78.417,-3.167)
C3': (40.008,-79.232,-5.361)
O5': (40.810,-76.753,-6.371)
O4': (40.867,-77.872,-3.649)
C5': (41.843,-77.591,-5.859)
P: (40.569,-76.611,-7.942)
C4': (41.272,-78.557,-4.861)
C2': (39.280,-79.590,-4.071)
O2': (39.797,-80.739,-3.453)
N1: (38.653,-77.345,-3.213)
O4: (36.043,-74.285,-3.225)
O2: (37.181,-78.469,-1.844)
C6: (38.912,-76.241,-3.963)
C5: (38.088,-75.194,-4.016)
O3': (40.388,-80.330,-6.171)
Image (generated by PyMOL):