Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11976:11499
Extra
PDB:
ATOM 1 O3' A A1975 21.345 -19.892 126.627 1.00 59.58 O
ATOM 2 P G A1976 19.971 -20.737 126.716 1.00 90.02 P
ATOM 3 OP1 G A1976 20.352 -22.154 127.009 1.00 90.18 O
ATOM 4 OP2 G A1976 19.160 -20.434 125.485 1.00 89.61 O
ATOM 5 O5' G A1976 19.282 -20.090 127.989 1.00 90.51 O
ATOM 6 C5' G A1976 20.067 -19.557 129.030 1.00 90.84 C
ATOM 7 C4' G A1976 19.471 -18.308 129.579 1.00 91.04 C
ATOM 8 O4' G A1976 19.687 -18.303 131.010 1.00 91.58 O
ATOM 9 C3' G A1976 20.099 -17.027 129.058 1.00 90.77 C
ATOM 10 O3' G A1976 19.165 -15.945 129.188 1.00 90.85 O
ATOM 11 C2' G A1976 21.220 -16.828 130.059 1.00 91.09 C
ATOM 12 O2' G A1976 21.731 -15.520 130.112 1.00 91.07 O
ATOM 13 C1' G A1976 20.504 -17.210 131.350 1.00 91.65 C
ATOM 14 N9 G A1976 21.390 -17.598 132.462 1.00 92.06 N
ATOM 15 C8 G A1976 22.052 -18.782 132.704 1.00 92.16 C
ATOM 16 N7 G A1976 22.756 -18.733 133.821 1.00 92.59 N
ATOM 17 C5 G A1976 22.562 -17.438 134.373 1.00 92.79 C
ATOM 18 C6 G A1976 23.039 -16.726 135.580 1.00 93.27 C
ATOM 19 O6 G A1976 23.790 -17.060 136.529 1.00 93.66 O
ATOM 20 N1 G A1976 22.547 -15.421 135.696 1.00 93.32 N
ATOM 21 C2 G A1976 21.708 -14.842 134.789 1.00 92.96 C
ATOM 22 N2 G A1976 21.336 -13.583 135.073 1.00 93.09 N
ATOM 23 N3 G A1976 21.268 -15.461 133.690 1.00 92.53 N
ATOM 24 C4 G A1976 21.706 -16.747 133.526 1.00 92.46 C
ATOM 25 P U A1977 18.208 -15.479 127.955 1.00 61.69 P
ATOM 26 OP1 U A1977 16.926 -14.992 128.563 1.00 61.99 O
ATOM 27 OP2 U A1977 18.144 -16.621 126.965 1.00 61.34 O
ATOM 28 O5' U A1977 19.007 -14.225 127.316 1.00 61.39 O
TER
ATOM 1 O3' U B1498 17.671 -5.100 138.378 1.00122.46 O
ATOM 2 P U B1499 16.597 -6.058 137.641 1.00161.82 P
ATOM 3 OP1 U B1499 15.961 -5.263 136.553 1.00161.43 O
ATOM 4 OP2 U B1499 15.725 -6.632 138.706 1.00162.03 O
ATOM 5 O5' U B1499 17.516 -7.211 137.010 1.00161.52 O
ATOM 6 C5' U B1499 17.138 -7.867 135.804 1.00160.88 C
ATOM 7 C4' U B1499 18.254 -8.720 135.226 1.00160.68 C
ATOM 8 O4' U B1499 19.484 -7.975 135.135 1.00160.92 O
ATOM 9 C3' U B1499 18.655 -9.964 136.003 1.00160.84 C
ATOM 10 O3' U B1499 17.735 -11.029 135.828 1.00160.49 O
ATOM 11 C2' U B1499 20.050 -10.272 135.443 1.00160.77 C
ATOM 12 O2' U B1499 19.960 -11.108 134.302 1.00160.17 O
ATOM 13 C1' U B1499 20.547 -8.891 134.997 1.00160.87 C
ATOM 14 N1 U B1499 21.723 -8.434 135.766 1.00161.41 N
ATOM 15 C2 U B1499 22.735 -7.948 134.963 1.00161.31 C
ATOM 16 O2 U B1499 22.618 -7.856 133.757 1.00160.83 O
ATOM 17 N3 U B1499 23.869 -7.532 135.602 1.00161.79 N
ATOM 18 C4 U B1499 24.106 -7.588 136.950 1.00162.35 C
ATOM 19 O4 U B1499 25.191 -7.174 137.366 1.00162.74 O
ATOM 20 C5 U B1499 23.022 -8.142 137.718 1.00162.42 C
ATOM 21 C6 U B1499 21.889 -8.550 137.124 1.00161.96 C
ATOM 22 P C B1500 17.749 -12.313 136.802 1.00137.24 P
ATOM 23 OP1 C B1500 16.937 -13.355 136.140 1.00136.71 O
ATOM 24 OP2 C B1500 17.346 -11.855 138.154 1.00137.79 O
ATOM 25 O5' C B1500 19.281 -12.754 136.810 1.00137.39 O
TER
ATOM 2 P G A1976 19.971 -20.737 126.716 1.00 90.02 P
ATOM 3 OP1 G A1976 20.352 -22.154 127.009 1.00 90.18 O
ATOM 4 OP2 G A1976 19.160 -20.434 125.485 1.00 89.61 O
ATOM 5 O5' G A1976 19.282 -20.090 127.989 1.00 90.51 O
ATOM 6 C5' G A1976 20.067 -19.557 129.030 1.00 90.84 C
ATOM 7 C4' G A1976 19.471 -18.308 129.579 1.00 91.04 C
ATOM 8 O4' G A1976 19.687 -18.303 131.010 1.00 91.58 O
ATOM 9 C3' G A1976 20.099 -17.027 129.058 1.00 90.77 C
ATOM 10 O3' G A1976 19.165 -15.945 129.188 1.00 90.85 O
ATOM 11 C2' G A1976 21.220 -16.828 130.059 1.00 91.09 C
ATOM 12 O2' G A1976 21.731 -15.520 130.112 1.00 91.07 O
ATOM 13 C1' G A1976 20.504 -17.210 131.350 1.00 91.65 C
ATOM 14 N9 G A1976 21.390 -17.598 132.462 1.00 92.06 N
ATOM 15 C8 G A1976 22.052 -18.782 132.704 1.00 92.16 C
ATOM 16 N7 G A1976 22.756 -18.733 133.821 1.00 92.59 N
ATOM 17 C5 G A1976 22.562 -17.438 134.373 1.00 92.79 C
ATOM 18 C6 G A1976 23.039 -16.726 135.580 1.00 93.27 C
ATOM 19 O6 G A1976 23.790 -17.060 136.529 1.00 93.66 O
ATOM 20 N1 G A1976 22.547 -15.421 135.696 1.00 93.32 N
ATOM 21 C2 G A1976 21.708 -14.842 134.789 1.00 92.96 C
ATOM 22 N2 G A1976 21.336 -13.583 135.073 1.00 93.09 N
ATOM 23 N3 G A1976 21.268 -15.461 133.690 1.00 92.53 N
ATOM 24 C4 G A1976 21.706 -16.747 133.526 1.00 92.46 C
ATOM 25 P U A1977 18.208 -15.479 127.955 1.00 61.69 P
ATOM 26 OP1 U A1977 16.926 -14.992 128.563 1.00 61.99 O
ATOM 27 OP2 U A1977 18.144 -16.621 126.965 1.00 61.34 O
ATOM 28 O5' U A1977 19.007 -14.225 127.316 1.00 61.39 O
TER
ATOM 1 O3' U B1498 17.671 -5.100 138.378 1.00122.46 O
ATOM 2 P U B1499 16.597 -6.058 137.641 1.00161.82 P
ATOM 3 OP1 U B1499 15.961 -5.263 136.553 1.00161.43 O
ATOM 4 OP2 U B1499 15.725 -6.632 138.706 1.00162.03 O
ATOM 5 O5' U B1499 17.516 -7.211 137.010 1.00161.52 O
ATOM 6 C5' U B1499 17.138 -7.867 135.804 1.00160.88 C
ATOM 7 C4' U B1499 18.254 -8.720 135.226 1.00160.68 C
ATOM 8 O4' U B1499 19.484 -7.975 135.135 1.00160.92 O
ATOM 9 C3' U B1499 18.655 -9.964 136.003 1.00160.84 C
ATOM 10 O3' U B1499 17.735 -11.029 135.828 1.00160.49 O
ATOM 11 C2' U B1499 20.050 -10.272 135.443 1.00160.77 C
ATOM 12 O2' U B1499 19.960 -11.108 134.302 1.00160.17 O
ATOM 13 C1' U B1499 20.547 -8.891 134.997 1.00160.87 C
ATOM 14 N1 U B1499 21.723 -8.434 135.766 1.00161.41 N
ATOM 15 C2 U B1499 22.735 -7.948 134.963 1.00161.31 C
ATOM 16 O2 U B1499 22.618 -7.856 133.757 1.00160.83 O
ATOM 17 N3 U B1499 23.869 -7.532 135.602 1.00161.79 N
ATOM 18 C4 U B1499 24.106 -7.588 136.950 1.00162.35 C
ATOM 19 O4 U B1499 25.191 -7.174 137.366 1.00162.74 O
ATOM 20 C5 U B1499 23.022 -8.142 137.718 1.00162.42 C
ATOM 21 C6 U B1499 21.889 -8.550 137.124 1.00161.96 C
ATOM 22 P C B1500 17.749 -12.313 136.802 1.00137.24 P
ATOM 23 OP1 C B1500 16.937 -13.355 136.140 1.00136.71 O
ATOM 24 OP2 C B1500 17.346 -11.855 138.154 1.00137.79 O
ATOM 25 O5' C B1500 19.281 -12.754 136.810 1.00137.39 O
TER
Atoms:
OP1: (20.352,-22.154,127.009)
OP2: (19.160,-20.434,125.485)
C3': (20.099,-17.027,129.058)
C1': (20.504,-17.210,131.350)
C5': (20.067,-19.557,129.030)
O6: (23.790,-17.060,136.529)
O4': (19.687,-18.303,131.010)
C8: (22.052,-18.782,132.704)
C2: (21.708,-14.842,134.789)
C6: (23.039,-16.726,135.580)
C5: (22.562,-17.438,134.373)
C4: (21.706,-16.747,133.526)
P: (19.971,-20.737,126.716)
C4': (19.471,-18.308,129.579)
C2': (21.220,-16.828,130.059)
O2': (21.731,-15.520,130.112)
N1: (22.547,-15.421,135.696)
N2: (21.336,-13.583,135.073)
N3: (21.268,-15.461,133.690)
N7: (22.756,-18.733,133.821)
N9: (21.390,-17.598,132.462)
O5': (19.282,-20.090,127.989)
O3': (19.165,-15.945,129.188)
OP2: (19.160,-20.434,125.485)
C3': (20.099,-17.027,129.058)
C1': (20.504,-17.210,131.350)
C5': (20.067,-19.557,129.030)
O6: (23.790,-17.060,136.529)
O4': (19.687,-18.303,131.010)
C8: (22.052,-18.782,132.704)
C2: (21.708,-14.842,134.789)
C6: (23.039,-16.726,135.580)
C5: (22.562,-17.438,134.373)
C4: (21.706,-16.747,133.526)
P: (19.971,-20.737,126.716)
C4': (19.471,-18.308,129.579)
C2': (21.220,-16.828,130.059)
O2': (21.731,-15.520,130.112)
N1: (22.547,-15.421,135.696)
N2: (21.336,-13.583,135.073)
N3: (21.268,-15.461,133.690)
N7: (22.756,-18.733,133.821)
N9: (21.390,-17.598,132.462)
O5': (19.282,-20.090,127.989)
O3': (19.165,-15.945,129.188)
C4: (24.106,-7.588,136.950)
N3: (23.869,-7.532,135.602)
OP1: (15.961,-5.263,136.553)
OP2: (15.725,-6.632,138.706)
C2: (22.735,-7.948,134.963)
C1': (20.547,-8.891,134.997)
C3': (18.655,-9.964,136.003)
O5': (17.516,-7.211,137.010)
O4': (19.484,-7.975,135.135)
C5': (17.138,-7.867,135.804)
P: (16.597,-6.058,137.641)
C4': (18.254,-8.720,135.226)
C2': (20.050,-10.272,135.443)
O2': (19.960,-11.108,134.302)
N1: (21.723,-8.434,135.766)
O4: (25.191,-7.174,137.366)
O2: (22.618,-7.856,133.757)
C6: (21.889,-8.550,137.124)
C5: (23.022,-8.142,137.718)
O3': (17.735,-11.029,135.828)
N3: (23.869,-7.532,135.602)
OP1: (15.961,-5.263,136.553)
OP2: (15.725,-6.632,138.706)
C2: (22.735,-7.948,134.963)
C1': (20.547,-8.891,134.997)
C3': (18.655,-9.964,136.003)
O5': (17.516,-7.211,137.010)
O4': (19.484,-7.975,135.135)
C5': (17.138,-7.867,135.804)
P: (16.597,-6.058,137.641)
C4': (18.254,-8.720,135.226)
C2': (20.050,-10.272,135.443)
O2': (19.960,-11.108,134.302)
N1: (21.723,-8.434,135.766)
O4: (25.191,-7.174,137.366)
O2: (22.618,-7.856,133.757)
C6: (21.889,-8.550,137.124)
C5: (23.022,-8.142,137.718)
O3': (17.735,-11.029,135.828)
Image (generated by PyMOL):