ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01278:0505

Extra

PDB:
ATOM 1 O3' A A1277 18.965 128.320 61.653 1.00 38.31 O
ATOM 2 P G A1278 18.847 128.256 63.258 1.00 38.96 P
ATOM 3 OP1 G A1278 19.445 126.962 63.684 1.00 38.28 O
ATOM 4 OP2 G A1278 17.472 128.597 63.674 1.00 37.92 O
ATOM 5 O5' G A1278 19.787 129.441 63.761 1.00 41.40 O
ATOM 6 C5' G A1278 21.190 129.477 63.435 1.00 38.13 C
ATOM 7 C4' G A1278 21.771 130.821 63.807 1.00 40.01 C
ATOM 8 O4' G A1278 21.121 131.866 63.035 1.00 39.59 O
ATOM 9 C3' G A1278 21.558 131.252 65.247 1.00 39.18 C
ATOM 10 O3' G A1278 22.514 130.670 66.121 1.00 40.13 O
ATOM 11 C2' G A1278 21.716 132.761 65.153 1.00 39.28 C
ATOM 12 O2' G A1278 23.082 133.133 65.101 1.00 36.89 O
ATOM 13 C1' G A1278 21.021 133.051 63.816 1.00 38.88 C
ATOM 14 N9 G A1278 19.604 133.373 63.965 1.00 37.97 N
ATOM 15 C8 G A1278 18.552 132.515 63.763 1.00 39.37 C
ATOM 16 N7 G A1278 17.392 133.054 64.021 1.00 39.23 N
ATOM 17 C5 G A1278 17.691 134.349 64.413 1.00 37.26 C
ATOM 18 C6 G A1278 16.836 135.399 64.844 1.00 37.18 C
ATOM 19 O6 G A1278 15.604 135.386 64.989 1.00 32.73 O
ATOM 20 N1 G A1278 17.551 136.555 65.130 1.00 35.78 N
ATOM 21 C2 G A1278 18.904 136.689 65.021 1.00 35.51 C
ATOM 22 N2 G A1278 19.391 137.914 65.303 1.00 35.10 N
ATOM 23 N3 G A1278 19.721 135.707 64.652 1.00 37.74 N
ATOM 24 C4 G A1278 19.051 134.575 64.362 1.00 37.49 C
ATOM 25 P U A1279 22.051 130.149 67.574 1.00 41.68 P
ATOM 26 OP1 U A1279 23.232 129.448 68.143 1.00 42.03 O
ATOM 27 OP2 U A1279 20.754 129.432 67.459 1.00 38.99 O
ATOM 28 O5' U A1279 21.820 131.479 68.410 1.00 38.17 O
TER

ATOM 1 O3' A B 504 22.372 145.140 61.053 1.00 42.74 O
ATOM 2 P U B 505 22.546 145.157 62.650 1.00 41.11 P
ATOM 3 OP1 U B 505 21.433 145.919 63.250 1.00 43.35 O
ATOM 4 OP2 U B 505 23.943 145.573 62.937 1.00 45.31 O
ATOM 5 O5' U B 505 22.390 143.621 63.049 1.00 40.47 O
ATOM 6 C5' U B 505 21.204 142.874 62.706 1.00 36.92 C
ATOM 7 C4' U B 505 21.457 141.395 62.880 1.00 36.98 C
ATOM 8 O4' U B 505 22.581 141.021 62.049 1.00 37.15 O
ATOM 9 C3' U B 505 21.845 140.963 64.286 1.00 37.48 C
ATOM 10 O3' U B 505 20.664 140.645 65.018 1.00 38.62 O
ATOM 11 C2' U B 505 22.664 139.703 64.037 1.00 38.16 C
ATOM 12 O2' U B 505 21.838 138.571 63.867 1.00 40.32 O
ATOM 13 C1' U B 505 23.338 140.017 62.695 1.00 37.99 C
ATOM 14 N1 U B 505 24.753 140.430 62.729 1.00 38.41 N
ATOM 15 C2 U B 505 25.717 139.446 62.950 1.00 38.05 C
ATOM 16 O2 U B 505 25.448 138.274 63.151 1.00 37.37 O
ATOM 17 N3 U B 505 27.016 139.889 62.920 1.00 38.44 N
ATOM 18 C4 U B 505 27.455 141.176 62.707 1.00 38.04 C
ATOM 19 O4 U B 505 28.669 141.401 62.693 1.00 38.24 O
ATOM 20 C5 U B 505 26.413 142.143 62.516 1.00 37.40 C
ATOM 21 C6 U B 505 25.131 141.750 62.534 1.00 39.32 C
ATOM 22 P G B 506 20.347 141.373 66.421 1.00 42.99 P
ATOM 23 OP1 G B 506 19.166 140.688 67.008 1.00 43.11 O
ATOM 24 OP2 G B 506 20.317 142.846 66.243 1.00 42.23 O
ATOM 25 O5' G B 506 21.615 141.029 67.312 1.00 45.03 O
TER

Atoms:
OP1: (19.445,126.962,63.684)
OP2: (17.472,128.597,63.674)
C3': (21.558,131.252,65.247)
C1': (21.021,133.051,63.816)
C5': (21.190,129.477,63.435)
O6: (15.604,135.386,64.989)
O4': (21.121,131.866,63.035)
C8: (18.552,132.515,63.763)
C2: (18.904,136.689,65.021)
C6: (16.836,135.399,64.844)
C5: (17.691,134.349,64.413)
C4: (19.051,134.575,64.362)
P: (18.847,128.256,63.258)
C4': (21.771,130.821,63.807)
C2': (21.716,132.761,65.153)
O2': (23.082,133.133,65.101)
N1: (17.551,136.555,65.130)
N2: (19.391,137.914,65.303)
N3: (19.721,135.707,64.652)
N7: (17.392,133.054,64.021)
N9: (19.604,133.373,63.965)
O5': (19.787,129.441,63.761)
O3': (22.514,130.670,66.121)
C4: (27.455,141.176,62.707)
N3: (27.016,139.889,62.920)
OP1: (21.433,145.919,63.250)
OP2: (23.943,145.573,62.937)
C2: (25.717,139.446,62.950)
C1': (23.338,140.017,62.695)
C3': (21.845,140.963,64.286)
O5': (22.390,143.621,63.049)
O4': (22.581,141.021,62.049)
C5': (21.204,142.874,62.706)
P: (22.546,145.157,62.650)
C4': (21.457,141.395,62.880)
C2': (22.664,139.703,64.037)
O2': (21.838,138.571,63.867)
N1: (24.753,140.430,62.729)
O4: (28.669,141.401,62.693)
O2: (25.448,138.274,63.151)
C6: (25.131,141.750,62.534)
C5: (26.413,142.143,62.516)
O3': (20.664,140.645,65.018)
Image (generated by PyMOL):
PyMOL image
show in jmol