Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 92.603 102.192 5.796 1.00 60.88 O
ATOM 2 P A A 366 92.723 101.649 7.304 1.00 62.76 P
ATOM 3 OP1 A A 366 93.422 102.707 8.078 1.00 62.45 O
ATOM 4 OP2 A A 366 93.279 100.269 7.286 1.00 61.00 O
ATOM 5 O5' A A 366 91.208 101.580 7.803 1.00 60.65 O
ATOM 6 C5' A A 366 90.421 102.784 7.931 1.00 60.18 C
ATOM 7 C4' A A 366 89.002 102.449 8.326 1.00 59.73 C
ATOM 8 O4' A A 366 88.350 101.728 7.251 1.00 60.90 O
ATOM 9 C3' A A 366 88.842 101.542 9.536 1.00 59.03 C
ATOM 10 O3' A A 366 88.934 102.288 10.743 1.00 57.39 O
ATOM 11 C2' A A 366 87.453 100.953 9.322 1.00 59.32 C
ATOM 12 O2' A A 366 86.407 101.813 9.728 1.00 59.80 O
ATOM 13 C1' A A 366 87.423 100.801 7.798 1.00 60.87 C
ATOM 14 N9 A A 366 87.777 99.456 7.341 1.00 61.53 N
ATOM 15 C8 A A 366 89.025 98.903 7.140 1.00 60.99 C
ATOM 16 N7 A A 366 88.990 97.653 6.748 1.00 59.84 N
ATOM 17 C5 A A 366 87.632 97.362 6.682 1.00 60.37 C
ATOM 18 C6 A A 366 86.929 96.194 6.339 1.00 60.02 C
ATOM 19 N6 A A 366 87.517 95.051 5.988 1.00 60.72 N
ATOM 20 N1 A A 366 85.580 96.241 6.374 1.00 60.95 N
ATOM 21 C2 A A 366 84.985 97.387 6.736 1.00 61.27 C
ATOM 22 N3 A A 366 85.534 98.546 7.084 1.00 60.63 N
ATOM 23 C4 A A 366 86.876 98.466 7.036 1.00 60.76 C
ATOM 24 P G A 367 89.340 101.552 12.112 1.00 56.93 P
ATOM 25 OP1 G A 367 90.619 100.816 11.908 1.00 53.61 O
ATOM 26 OP2 G A 367 88.137 100.825 12.605 1.00 55.67 O
ATOM 27 O5' G A 367 89.627 102.758 13.106 1.00 54.38 O
TER
ATOM 1 O3' U B 397 92.789 92.954 9.143 1.00 67.53 O
ATOM 2 P A B 398 92.642 92.538 7.604 1.00 67.57 P
ATOM 3 OP1 A B 398 93.698 91.537 7.274 1.00 67.83 O
ATOM 4 OP2 A B 398 92.517 93.771 6.787 1.00 67.31 O
ATOM 5 O5' A B 398 91.228 91.817 7.585 1.00 68.11 O
ATOM 6 C5' A B 398 91.004 90.624 8.346 1.00 68.58 C
ATOM 7 C4' A B 398 89.537 90.303 8.371 1.00 69.41 C
ATOM 8 O4' A B 398 88.863 91.222 9.276 1.00 69.37 O
ATOM 9 C3' A B 398 88.832 90.436 7.024 1.00 70.02 C
ATOM 10 O3' A B 398 87.831 89.433 6.899 1.00 72.16 O
ATOM 11 C2' A B 398 88.196 91.821 7.123 1.00 68.80 C
ATOM 12 O2' A B 398 87.058 92.004 6.306 1.00 67.79 O
ATOM 13 C1' A B 398 87.803 91.855 8.594 1.00 69.37 C
ATOM 14 N9 A B 398 87.624 93.203 9.129 1.00 70.46 N
ATOM 15 C8 A B 398 88.575 94.153 9.421 1.00 69.99 C
ATOM 16 N7 A B 398 88.076 95.282 9.863 1.00 69.82 N
ATOM 17 C5 A B 398 86.704 95.061 9.870 1.00 70.49 C
ATOM 18 C6 A B 398 85.612 95.877 10.226 1.00 70.85 C
ATOM 19 N6 A B 398 85.739 97.136 10.663 1.00 70.95 N
ATOM 20 N1 A B 398 84.370 95.350 10.114 1.00 70.68 N
ATOM 21 C2 A B 398 84.245 94.090 9.674 1.00 70.09 C
ATOM 22 N3 A B 398 85.191 93.227 9.309 1.00 69.65 N
ATOM 23 C4 A B 398 86.412 93.781 9.430 1.00 70.49 C
ATOM 24 P A B 399 88.020 88.248 5.831 1.00 72.94 P
ATOM 25 OP1 A B 399 88.536 88.829 4.561 1.00 72.81 O
ATOM 26 OP2 A B 399 86.761 87.456 5.815 1.00 72.03 O
ATOM 27 O5' A B 399 89.185 87.366 6.464 1.00 72.68 O
TER
ATOM 2 P A A 366 92.723 101.649 7.304 1.00 62.76 P
ATOM 3 OP1 A A 366 93.422 102.707 8.078 1.00 62.45 O
ATOM 4 OP2 A A 366 93.279 100.269 7.286 1.00 61.00 O
ATOM 5 O5' A A 366 91.208 101.580 7.803 1.00 60.65 O
ATOM 6 C5' A A 366 90.421 102.784 7.931 1.00 60.18 C
ATOM 7 C4' A A 366 89.002 102.449 8.326 1.00 59.73 C
ATOM 8 O4' A A 366 88.350 101.728 7.251 1.00 60.90 O
ATOM 9 C3' A A 366 88.842 101.542 9.536 1.00 59.03 C
ATOM 10 O3' A A 366 88.934 102.288 10.743 1.00 57.39 O
ATOM 11 C2' A A 366 87.453 100.953 9.322 1.00 59.32 C
ATOM 12 O2' A A 366 86.407 101.813 9.728 1.00 59.80 O
ATOM 13 C1' A A 366 87.423 100.801 7.798 1.00 60.87 C
ATOM 14 N9 A A 366 87.777 99.456 7.341 1.00 61.53 N
ATOM 15 C8 A A 366 89.025 98.903 7.140 1.00 60.99 C
ATOM 16 N7 A A 366 88.990 97.653 6.748 1.00 59.84 N
ATOM 17 C5 A A 366 87.632 97.362 6.682 1.00 60.37 C
ATOM 18 C6 A A 366 86.929 96.194 6.339 1.00 60.02 C
ATOM 19 N6 A A 366 87.517 95.051 5.988 1.00 60.72 N
ATOM 20 N1 A A 366 85.580 96.241 6.374 1.00 60.95 N
ATOM 21 C2 A A 366 84.985 97.387 6.736 1.00 61.27 C
ATOM 22 N3 A A 366 85.534 98.546 7.084 1.00 60.63 N
ATOM 23 C4 A A 366 86.876 98.466 7.036 1.00 60.76 C
ATOM 24 P G A 367 89.340 101.552 12.112 1.00 56.93 P
ATOM 25 OP1 G A 367 90.619 100.816 11.908 1.00 53.61 O
ATOM 26 OP2 G A 367 88.137 100.825 12.605 1.00 55.67 O
ATOM 27 O5' G A 367 89.627 102.758 13.106 1.00 54.38 O
TER
ATOM 1 O3' U B 397 92.789 92.954 9.143 1.00 67.53 O
ATOM 2 P A B 398 92.642 92.538 7.604 1.00 67.57 P
ATOM 3 OP1 A B 398 93.698 91.537 7.274 1.00 67.83 O
ATOM 4 OP2 A B 398 92.517 93.771 6.787 1.00 67.31 O
ATOM 5 O5' A B 398 91.228 91.817 7.585 1.00 68.11 O
ATOM 6 C5' A B 398 91.004 90.624 8.346 1.00 68.58 C
ATOM 7 C4' A B 398 89.537 90.303 8.371 1.00 69.41 C
ATOM 8 O4' A B 398 88.863 91.222 9.276 1.00 69.37 O
ATOM 9 C3' A B 398 88.832 90.436 7.024 1.00 70.02 C
ATOM 10 O3' A B 398 87.831 89.433 6.899 1.00 72.16 O
ATOM 11 C2' A B 398 88.196 91.821 7.123 1.00 68.80 C
ATOM 12 O2' A B 398 87.058 92.004 6.306 1.00 67.79 O
ATOM 13 C1' A B 398 87.803 91.855 8.594 1.00 69.37 C
ATOM 14 N9 A B 398 87.624 93.203 9.129 1.00 70.46 N
ATOM 15 C8 A B 398 88.575 94.153 9.421 1.00 69.99 C
ATOM 16 N7 A B 398 88.076 95.282 9.863 1.00 69.82 N
ATOM 17 C5 A B 398 86.704 95.061 9.870 1.00 70.49 C
ATOM 18 C6 A B 398 85.612 95.877 10.226 1.00 70.85 C
ATOM 19 N6 A B 398 85.739 97.136 10.663 1.00 70.95 N
ATOM 20 N1 A B 398 84.370 95.350 10.114 1.00 70.68 N
ATOM 21 C2 A B 398 84.245 94.090 9.674 1.00 70.09 C
ATOM 22 N3 A B 398 85.191 93.227 9.309 1.00 69.65 N
ATOM 23 C4 A B 398 86.412 93.781 9.430 1.00 70.49 C
ATOM 24 P A B 399 88.020 88.248 5.831 1.00 72.94 P
ATOM 25 OP1 A B 399 88.536 88.829 4.561 1.00 72.81 O
ATOM 26 OP2 A B 399 86.761 87.456 5.815 1.00 72.03 O
ATOM 27 O5' A B 399 89.185 87.366 6.464 1.00 72.68 O
TER
Atoms:
OP1: (93.422,102.707,8.078)
OP2: (93.279,100.269,7.286)
C3': (88.842,101.542,9.536)
C1': (87.423,100.801,7.798)
C5': (90.421,102.784,7.931)
O4': (88.350,101.728,7.251)
C8: (89.025,98.903,7.140)
O2': (86.407,101.813,9.728)
C6: (86.929,96.194,6.339)
C5: (87.632,97.362,6.682)
C4: (86.876,98.466,7.036)
P: (92.723,101.649,7.304)
C4': (89.002,102.449,8.326)
C2': (87.453,100.953,9.322)
C2: (84.985,97.387,6.736)
N1: (85.580,96.241,6.374)
N3: (85.534,98.546,7.084)
N6: (87.517,95.051,5.988)
N7: (88.990,97.653,6.748)
N9: (87.777,99.456,7.341)
O5': (91.208,101.580,7.803)
O3': (88.934,102.288,10.743)
OP2: (93.279,100.269,7.286)
C3': (88.842,101.542,9.536)
C1': (87.423,100.801,7.798)
C5': (90.421,102.784,7.931)
O4': (88.350,101.728,7.251)
C8: (89.025,98.903,7.140)
O2': (86.407,101.813,9.728)
C6: (86.929,96.194,6.339)
C5: (87.632,97.362,6.682)
C4: (86.876,98.466,7.036)
P: (92.723,101.649,7.304)
C4': (89.002,102.449,8.326)
C2': (87.453,100.953,9.322)
C2: (84.985,97.387,6.736)
N1: (85.580,96.241,6.374)
N3: (85.534,98.546,7.084)
N6: (87.517,95.051,5.988)
N7: (88.990,97.653,6.748)
N9: (87.777,99.456,7.341)
O5': (91.208,101.580,7.803)
O3': (88.934,102.288,10.743)
OP1: (93.698,91.537,7.274)
OP2: (92.517,93.771,6.787)
C3': (88.832,90.436,7.024)
C1': (87.803,91.855,8.594)
C5': (91.004,90.624,8.346)
O4': (88.863,91.222,9.276)
C8: (88.575,94.153,9.421)
O2': (87.058,92.004,6.306)
C6: (85.612,95.877,10.226)
C5: (86.704,95.061,9.870)
C4: (86.412,93.781,9.430)
P: (92.642,92.538,7.604)
C4': (89.537,90.303,8.371)
C2': (88.196,91.821,7.123)
C2: (84.245,94.090,9.674)
N1: (84.370,95.350,10.114)
N3: (85.191,93.227,9.309)
N6: (85.739,97.136,10.663)
N7: (88.076,95.282,9.863)
N9: (87.624,93.203,9.129)
O5': (91.228,91.817,7.585)
O3': (87.831,89.433,6.899)
OP2: (92.517,93.771,6.787)
C3': (88.832,90.436,7.024)
C1': (87.803,91.855,8.594)
C5': (91.004,90.624,8.346)
O4': (88.863,91.222,9.276)
C8: (88.575,94.153,9.421)
O2': (87.058,92.004,6.306)
C6: (85.612,95.877,10.226)
C5: (86.704,95.061,9.870)
C4: (86.412,93.781,9.430)
P: (92.642,92.538,7.604)
C4': (89.537,90.303,8.371)
C2': (88.196,91.821,7.123)
C2: (84.245,94.090,9.674)
N1: (84.370,95.350,10.114)
N3: (85.191,93.227,9.309)
N6: (85.739,97.136,10.663)
N7: (88.076,95.282,9.863)
N9: (87.624,93.203,9.129)
O5': (91.228,91.817,7.585)
O3': (87.831,89.433,6.899)
Image (generated by PyMOL):