Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A359:A47
Extra
PDB:
ATOM 1 O3' G A 358 -39.617 55.820 119.562 1.00 17.08 O
ATOM 2 P G A 359 -40.712 56.366 118.535 1.00 10.38 P
ATOM 3 OP1 G A 359 -41.485 57.402 119.231 1.00 10.38 O
ATOM 4 OP2 G A 359 -41.434 55.198 117.992 1.00 10.38 O
ATOM 5 O5' G A 359 -39.825 57.023 117.411 1.00 10.38 O
ATOM 6 C5' G A 359 -38.742 57.858 117.754 1.00 10.38 C
ATOM 7 C4' G A 359 -37.743 57.951 116.634 1.00 10.38 C
ATOM 8 O4' G A 359 -36.878 56.780 116.635 1.00 10.38 O
ATOM 9 C3' G A 359 -38.310 57.970 115.226 1.00 10.38 C
ATOM 10 O3' G A 359 -38.864 59.215 114.857 1.00 10.38 O
ATOM 11 C2' G A 359 -37.102 57.558 114.409 1.00 10.38 C
ATOM 12 O2' G A 359 -36.162 58.611 114.331 1.00 10.38 O
ATOM 13 C1' G A 359 -36.531 56.458 115.303 1.00 10.38 C
ATOM 14 N9 G A 359 -37.125 55.156 114.958 1.00 10.69 N
ATOM 15 C8 G A 359 -38.338 54.656 115.322 1.00 10.69 C
ATOM 16 N7 G A 359 -38.573 53.507 114.774 1.00 10.69 N
ATOM 17 C5 G A 359 -37.466 53.245 113.992 1.00 10.69 C
ATOM 18 C6 G A 359 -37.143 52.154 113.160 1.00 10.69 C
ATOM 19 O6 G A 359 -37.800 51.132 112.929 1.00 10.69 O
ATOM 20 N1 G A 359 -35.895 52.320 112.561 1.00 10.69 N
ATOM 21 C2 G A 359 -35.056 53.398 112.728 1.00 10.69 C
ATOM 22 N2 G A 359 -33.886 53.396 112.060 1.00 10.69 N
ATOM 23 N3 G A 359 -35.372 54.415 113.491 1.00 10.69 N
ATOM 24 C4 G A 359 -36.571 54.263 114.085 1.00 10.69 C
ATOM 25 P G A 360 -40.238 59.275 114.034 1.00 9.64 P
ATOM 26 OP1 G A 360 -40.631 60.689 113.973 1.00 9.64 O
ATOM 27 OP2 G A 360 -41.174 58.301 114.636 1.00 9.64 O
ATOM 28 O5' G A 360 -39.809 58.772 112.593 1.00 9.64 O
TER
ATOM 1 O3' C B 46 -29.134 55.427 106.021 1.00 39.52 O
ATOM 2 P U B 47 -28.568 55.778 107.482 1.00 26.58 P
ATOM 3 OP1 U B 47 -27.584 56.874 107.316 1.00 26.58 O
ATOM 4 OP2 U B 47 -28.113 54.494 108.107 1.00 26.58 O
ATOM 5 O5' U B 47 -29.857 56.324 108.233 1.00 26.58 O
ATOM 6 C5' U B 47 -30.201 57.696 108.152 1.00 26.58 C
ATOM 7 C4' U B 47 -31.218 58.066 109.184 1.00 26.58 C
ATOM 8 O4' U B 47 -32.496 57.535 108.783 1.00 26.58 O
ATOM 9 C3' U B 47 -30.941 57.519 110.573 1.00 26.58 C
ATOM 10 O3' U B 47 -31.297 58.489 111.550 1.00 26.58 O
ATOM 11 C2' U B 47 -31.855 56.311 110.678 1.00 26.58 C
ATOM 12 O2' U B 47 -32.276 56.020 111.995 1.00 26.58 O
ATOM 13 C1' U B 47 -33.023 56.716 109.800 1.00 26.58 C
ATOM 14 N1 U B 47 -33.694 55.595 109.149 1.00 26.10 N
ATOM 15 C2 U B 47 -34.981 55.320 109.548 1.00 26.10 C
ATOM 16 O2 U B 47 -35.563 55.915 110.431 1.00 26.10 O
ATOM 17 N3 U B 47 -35.562 54.295 108.875 1.00 26.10 N
ATOM 18 C4 U B 47 -35.007 53.553 107.871 1.00 26.10 C
ATOM 19 O4 U B 47 -35.701 52.675 107.377 1.00 26.10 O
ATOM 20 C5 U B 47 -33.667 53.901 107.508 1.00 26.10 C
ATOM 21 C6 U B 47 -33.066 54.902 108.146 1.00 26.10 C
ATOM 22 P A B 48 -30.162 59.477 112.126 1.00 17.26 P
ATOM 23 OP1 A B 48 -30.736 60.853 112.104 1.00 17.26 O
ATOM 24 OP2 A B 48 -28.904 59.212 111.350 1.00 17.26 O
ATOM 25 O5' A B 48 -29.972 58.968 113.628 1.00 17.26 O
TER
ATOM 2 P G A 359 -40.712 56.366 118.535 1.00 10.38 P
ATOM 3 OP1 G A 359 -41.485 57.402 119.231 1.00 10.38 O
ATOM 4 OP2 G A 359 -41.434 55.198 117.992 1.00 10.38 O
ATOM 5 O5' G A 359 -39.825 57.023 117.411 1.00 10.38 O
ATOM 6 C5' G A 359 -38.742 57.858 117.754 1.00 10.38 C
ATOM 7 C4' G A 359 -37.743 57.951 116.634 1.00 10.38 C
ATOM 8 O4' G A 359 -36.878 56.780 116.635 1.00 10.38 O
ATOM 9 C3' G A 359 -38.310 57.970 115.226 1.00 10.38 C
ATOM 10 O3' G A 359 -38.864 59.215 114.857 1.00 10.38 O
ATOM 11 C2' G A 359 -37.102 57.558 114.409 1.00 10.38 C
ATOM 12 O2' G A 359 -36.162 58.611 114.331 1.00 10.38 O
ATOM 13 C1' G A 359 -36.531 56.458 115.303 1.00 10.38 C
ATOM 14 N9 G A 359 -37.125 55.156 114.958 1.00 10.69 N
ATOM 15 C8 G A 359 -38.338 54.656 115.322 1.00 10.69 C
ATOM 16 N7 G A 359 -38.573 53.507 114.774 1.00 10.69 N
ATOM 17 C5 G A 359 -37.466 53.245 113.992 1.00 10.69 C
ATOM 18 C6 G A 359 -37.143 52.154 113.160 1.00 10.69 C
ATOM 19 O6 G A 359 -37.800 51.132 112.929 1.00 10.69 O
ATOM 20 N1 G A 359 -35.895 52.320 112.561 1.00 10.69 N
ATOM 21 C2 G A 359 -35.056 53.398 112.728 1.00 10.69 C
ATOM 22 N2 G A 359 -33.886 53.396 112.060 1.00 10.69 N
ATOM 23 N3 G A 359 -35.372 54.415 113.491 1.00 10.69 N
ATOM 24 C4 G A 359 -36.571 54.263 114.085 1.00 10.69 C
ATOM 25 P G A 360 -40.238 59.275 114.034 1.00 9.64 P
ATOM 26 OP1 G A 360 -40.631 60.689 113.973 1.00 9.64 O
ATOM 27 OP2 G A 360 -41.174 58.301 114.636 1.00 9.64 O
ATOM 28 O5' G A 360 -39.809 58.772 112.593 1.00 9.64 O
TER
ATOM 1 O3' C B 46 -29.134 55.427 106.021 1.00 39.52 O
ATOM 2 P U B 47 -28.568 55.778 107.482 1.00 26.58 P
ATOM 3 OP1 U B 47 -27.584 56.874 107.316 1.00 26.58 O
ATOM 4 OP2 U B 47 -28.113 54.494 108.107 1.00 26.58 O
ATOM 5 O5' U B 47 -29.857 56.324 108.233 1.00 26.58 O
ATOM 6 C5' U B 47 -30.201 57.696 108.152 1.00 26.58 C
ATOM 7 C4' U B 47 -31.218 58.066 109.184 1.00 26.58 C
ATOM 8 O4' U B 47 -32.496 57.535 108.783 1.00 26.58 O
ATOM 9 C3' U B 47 -30.941 57.519 110.573 1.00 26.58 C
ATOM 10 O3' U B 47 -31.297 58.489 111.550 1.00 26.58 O
ATOM 11 C2' U B 47 -31.855 56.311 110.678 1.00 26.58 C
ATOM 12 O2' U B 47 -32.276 56.020 111.995 1.00 26.58 O
ATOM 13 C1' U B 47 -33.023 56.716 109.800 1.00 26.58 C
ATOM 14 N1 U B 47 -33.694 55.595 109.149 1.00 26.10 N
ATOM 15 C2 U B 47 -34.981 55.320 109.548 1.00 26.10 C
ATOM 16 O2 U B 47 -35.563 55.915 110.431 1.00 26.10 O
ATOM 17 N3 U B 47 -35.562 54.295 108.875 1.00 26.10 N
ATOM 18 C4 U B 47 -35.007 53.553 107.871 1.00 26.10 C
ATOM 19 O4 U B 47 -35.701 52.675 107.377 1.00 26.10 O
ATOM 20 C5 U B 47 -33.667 53.901 107.508 1.00 26.10 C
ATOM 21 C6 U B 47 -33.066 54.902 108.146 1.00 26.10 C
ATOM 22 P A B 48 -30.162 59.477 112.126 1.00 17.26 P
ATOM 23 OP1 A B 48 -30.736 60.853 112.104 1.00 17.26 O
ATOM 24 OP2 A B 48 -28.904 59.212 111.350 1.00 17.26 O
ATOM 25 O5' A B 48 -29.972 58.968 113.628 1.00 17.26 O
TER
Atoms:
OP1: (-41.485,57.402,119.231)
OP2: (-41.434,55.198,117.992)
C3': (-38.310,57.970,115.226)
C1': (-36.531,56.458,115.303)
C5': (-38.742,57.858,117.754)
O6: (-37.800,51.132,112.929)
O4': (-36.878,56.780,116.635)
C8: (-38.338,54.656,115.322)
C2: (-35.056,53.398,112.728)
C6: (-37.143,52.154,113.160)
C5: (-37.466,53.245,113.992)
C4: (-36.571,54.263,114.085)
P: (-40.712,56.366,118.535)
C4': (-37.743,57.951,116.634)
C2': (-37.102,57.558,114.409)
O2': (-36.162,58.611,114.331)
N1: (-35.895,52.320,112.561)
N2: (-33.886,53.396,112.060)
N3: (-35.372,54.415,113.491)
N7: (-38.573,53.507,114.774)
N9: (-37.125,55.156,114.958)
O5': (-39.825,57.023,117.411)
O3': (-38.864,59.215,114.857)
OP2: (-41.434,55.198,117.992)
C3': (-38.310,57.970,115.226)
C1': (-36.531,56.458,115.303)
C5': (-38.742,57.858,117.754)
O6: (-37.800,51.132,112.929)
O4': (-36.878,56.780,116.635)
C8: (-38.338,54.656,115.322)
C2: (-35.056,53.398,112.728)
C6: (-37.143,52.154,113.160)
C5: (-37.466,53.245,113.992)
C4: (-36.571,54.263,114.085)
P: (-40.712,56.366,118.535)
C4': (-37.743,57.951,116.634)
C2': (-37.102,57.558,114.409)
O2': (-36.162,58.611,114.331)
N1: (-35.895,52.320,112.561)
N2: (-33.886,53.396,112.060)
N3: (-35.372,54.415,113.491)
N7: (-38.573,53.507,114.774)
N9: (-37.125,55.156,114.958)
O5': (-39.825,57.023,117.411)
O3': (-38.864,59.215,114.857)
C4: (-35.007,53.553,107.871)
N3: (-35.562,54.295,108.875)
OP1: (-27.584,56.874,107.316)
OP2: (-28.113,54.494,108.107)
C2: (-34.981,55.320,109.548)
C1': (-33.023,56.716,109.800)
C3': (-30.941,57.519,110.573)
O5': (-29.857,56.324,108.233)
O4': (-32.496,57.535,108.783)
C5': (-30.201,57.696,108.152)
P: (-28.568,55.778,107.482)
C4': (-31.218,58.066,109.184)
C2': (-31.855,56.311,110.678)
O2': (-32.276,56.020,111.995)
N1: (-33.694,55.595,109.149)
O4: (-35.701,52.675,107.377)
O2: (-35.563,55.915,110.431)
C6: (-33.066,54.902,108.146)
C5: (-33.667,53.901,107.508)
O3': (-31.297,58.489,111.550)
N3: (-35.562,54.295,108.875)
OP1: (-27.584,56.874,107.316)
OP2: (-28.113,54.494,108.107)
C2: (-34.981,55.320,109.548)
C1': (-33.023,56.716,109.800)
C3': (-30.941,57.519,110.573)
O5': (-29.857,56.324,108.233)
O4': (-32.496,57.535,108.783)
C5': (-30.201,57.696,108.152)
P: (-28.568,55.778,107.482)
C4': (-31.218,58.066,109.184)
C2': (-31.855,56.311,110.678)
O2': (-32.276,56.020,111.995)
N1: (-33.694,55.595,109.149)
O4: (-35.701,52.675,107.377)
O2: (-35.563,55.915,110.431)
C6: (-33.066,54.902,108.146)
C5: (-33.667,53.901,107.508)
O3': (-31.297,58.489,111.550)
Image (generated by PyMOL):