Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11122:11273
Extra
PDB:
ATOM 1 O3' G A1121 63.762 10.215 24.026 1.00 33.70 O
ATOM 2 P G A1122 65.264 10.644 23.699 1.00 37.17 P
ATOM 3 OP1 G A1122 65.875 11.192 24.927 1.00 36.98 O
ATOM 4 OP2 G A1122 65.217 11.483 22.520 1.00 37.54 O
ATOM 5 O5' G A1122 65.955 9.276 23.383 1.00 37.17 O
ATOM 6 C5' G A1122 67.169 8.917 24.037 1.00 37.06 C
ATOM 7 C4' G A1122 67.535 7.492 23.770 1.00 37.04 C
ATOM 8 O4' G A1122 66.859 6.642 24.733 1.00 36.69 O
ATOM 9 C3' G A1122 67.125 6.967 22.406 1.00 37.30 C
ATOM 10 O3' G A1122 68.095 7.197 21.435 1.00 37.63 O
ATOM 11 C2' G A1122 66.840 5.488 22.652 1.00 37.11 C
ATOM 12 O2' G A1122 68.026 4.728 22.596 1.00 37.17 O
ATOM 13 C1' G A1122 66.366 5.484 24.099 1.00 36.73 C
ATOM 14 N9 G A1122 64.899 5.475 24.262 1.00 36.58 N
ATOM 15 C8 G A1122 64.107 6.573 24.374 1.00 36.58 C
ATOM 16 N7 G A1122 62.882 6.277 24.692 1.00 36.41 N
ATOM 17 C5 G A1122 62.882 4.902 24.849 1.00 36.28 C
ATOM 18 C6 G A1122 61.864 3.987 25.226 1.00 36.08 C
ATOM 19 O6 G A1122 60.687 4.145 25.483 1.00 35.97 O
ATOM 20 N1 G A1122 62.338 2.705 25.262 1.00 36.03 N
ATOM 21 C2 G A1122 63.617 2.340 24.993 1.00 36.15 C
ATOM 22 N2 G A1122 63.917 1.043 25.089 1.00 36.09 N
ATOM 23 N3 G A1122 64.541 3.178 24.679 1.00 36.32 N
ATOM 24 C4 G A1122 64.120 4.420 24.600 1.00 36.39 C
ATOM 25 P A A1123 67.737 7.991 20.097 1.00 38.71 P
ATOM 26 OP1 A A1123 68.996 8.495 19.478 1.00 39.01 O
ATOM 27 OP2 A A1123 66.723 8.949 20.415 1.00 38.63 O
ATOM 28 O5' A A1123 67.136 6.887 19.188 1.00 38.82 O
TER
ATOM 1 O3' C B1272 69.308 1.693 22.348 1.00 35.18 O
ATOM 2 P U B1273 70.073 0.849 23.458 1.00 39.18 P
ATOM 3 OP1 U B1273 70.925 1.762 24.156 1.00 39.13 O
ATOM 4 OP2 U B1273 70.673 -0.315 22.774 1.00 39.37 O
ATOM 5 O5' U B1273 68.901 0.373 24.399 1.00 38.84 O
ATOM 6 C5' U B1273 68.571 1.015 25.615 1.00 38.55 C
ATOM 7 C4' U B1273 67.855 0.030 26.482 1.00 38.26 C
ATOM 8 O4' U B1273 66.781 -0.496 25.648 1.00 38.35 O
ATOM 9 C3' U B1273 68.733 -1.184 26.851 1.00 38.22 C
ATOM 10 O3' U B1273 69.157 -1.300 28.260 1.00 37.94 O
ATOM 11 C2' U B1273 67.974 -2.406 26.382 1.00 38.23 C
ATOM 12 O2' U B1273 67.699 -3.350 27.368 1.00 37.97 O
ATOM 13 C1' U B1273 66.694 -1.897 25.749 1.00 38.28 C
ATOM 14 N1 U B1273 66.561 -2.527 24.438 1.00 38.57 N
ATOM 15 C2 U B1273 65.755 -3.667 24.328 1.00 38.52 C
ATOM 16 O2 U B1273 64.947 -3.969 25.175 1.00 38.26 O
ATOM 17 N3 U B1273 65.787 -4.426 23.185 1.00 38.80 N
ATOM 18 C4 U B1273 66.655 -4.202 22.158 1.00 39.12 C
ATOM 19 O4 U B1273 66.653 -4.925 21.154 1.00 39.38 O
ATOM 20 C5 U B1273 67.532 -3.082 22.391 1.00 39.14 C
ATOM 21 C6 U B1273 67.514 -2.347 23.511 1.00 38.87 C
ATOM 22 P A B1274 68.136 -1.198 29.477 1.00 38.75 P
ATOM 23 OP1 A B1274 66.786 -1.211 28.906 1.00 38.75 O
ATOM 24 OP2 A B1274 68.573 -0.051 30.318 1.00 38.65 O
ATOM 25 O5' A B1274 68.392 -2.543 30.267 1.00 38.58 O
TER
ATOM 2 P G A1122 65.264 10.644 23.699 1.00 37.17 P
ATOM 3 OP1 G A1122 65.875 11.192 24.927 1.00 36.98 O
ATOM 4 OP2 G A1122 65.217 11.483 22.520 1.00 37.54 O
ATOM 5 O5' G A1122 65.955 9.276 23.383 1.00 37.17 O
ATOM 6 C5' G A1122 67.169 8.917 24.037 1.00 37.06 C
ATOM 7 C4' G A1122 67.535 7.492 23.770 1.00 37.04 C
ATOM 8 O4' G A1122 66.859 6.642 24.733 1.00 36.69 O
ATOM 9 C3' G A1122 67.125 6.967 22.406 1.00 37.30 C
ATOM 10 O3' G A1122 68.095 7.197 21.435 1.00 37.63 O
ATOM 11 C2' G A1122 66.840 5.488 22.652 1.00 37.11 C
ATOM 12 O2' G A1122 68.026 4.728 22.596 1.00 37.17 O
ATOM 13 C1' G A1122 66.366 5.484 24.099 1.00 36.73 C
ATOM 14 N9 G A1122 64.899 5.475 24.262 1.00 36.58 N
ATOM 15 C8 G A1122 64.107 6.573 24.374 1.00 36.58 C
ATOM 16 N7 G A1122 62.882 6.277 24.692 1.00 36.41 N
ATOM 17 C5 G A1122 62.882 4.902 24.849 1.00 36.28 C
ATOM 18 C6 G A1122 61.864 3.987 25.226 1.00 36.08 C
ATOM 19 O6 G A1122 60.687 4.145 25.483 1.00 35.97 O
ATOM 20 N1 G A1122 62.338 2.705 25.262 1.00 36.03 N
ATOM 21 C2 G A1122 63.617 2.340 24.993 1.00 36.15 C
ATOM 22 N2 G A1122 63.917 1.043 25.089 1.00 36.09 N
ATOM 23 N3 G A1122 64.541 3.178 24.679 1.00 36.32 N
ATOM 24 C4 G A1122 64.120 4.420 24.600 1.00 36.39 C
ATOM 25 P A A1123 67.737 7.991 20.097 1.00 38.71 P
ATOM 26 OP1 A A1123 68.996 8.495 19.478 1.00 39.01 O
ATOM 27 OP2 A A1123 66.723 8.949 20.415 1.00 38.63 O
ATOM 28 O5' A A1123 67.136 6.887 19.188 1.00 38.82 O
TER
ATOM 1 O3' C B1272 69.308 1.693 22.348 1.00 35.18 O
ATOM 2 P U B1273 70.073 0.849 23.458 1.00 39.18 P
ATOM 3 OP1 U B1273 70.925 1.762 24.156 1.00 39.13 O
ATOM 4 OP2 U B1273 70.673 -0.315 22.774 1.00 39.37 O
ATOM 5 O5' U B1273 68.901 0.373 24.399 1.00 38.84 O
ATOM 6 C5' U B1273 68.571 1.015 25.615 1.00 38.55 C
ATOM 7 C4' U B1273 67.855 0.030 26.482 1.00 38.26 C
ATOM 8 O4' U B1273 66.781 -0.496 25.648 1.00 38.35 O
ATOM 9 C3' U B1273 68.733 -1.184 26.851 1.00 38.22 C
ATOM 10 O3' U B1273 69.157 -1.300 28.260 1.00 37.94 O
ATOM 11 C2' U B1273 67.974 -2.406 26.382 1.00 38.23 C
ATOM 12 O2' U B1273 67.699 -3.350 27.368 1.00 37.97 O
ATOM 13 C1' U B1273 66.694 -1.897 25.749 1.00 38.28 C
ATOM 14 N1 U B1273 66.561 -2.527 24.438 1.00 38.57 N
ATOM 15 C2 U B1273 65.755 -3.667 24.328 1.00 38.52 C
ATOM 16 O2 U B1273 64.947 -3.969 25.175 1.00 38.26 O
ATOM 17 N3 U B1273 65.787 -4.426 23.185 1.00 38.80 N
ATOM 18 C4 U B1273 66.655 -4.202 22.158 1.00 39.12 C
ATOM 19 O4 U B1273 66.653 -4.925 21.154 1.00 39.38 O
ATOM 20 C5 U B1273 67.532 -3.082 22.391 1.00 39.14 C
ATOM 21 C6 U B1273 67.514 -2.347 23.511 1.00 38.87 C
ATOM 22 P A B1274 68.136 -1.198 29.477 1.00 38.75 P
ATOM 23 OP1 A B1274 66.786 -1.211 28.906 1.00 38.75 O
ATOM 24 OP2 A B1274 68.573 -0.051 30.318 1.00 38.65 O
ATOM 25 O5' A B1274 68.392 -2.543 30.267 1.00 38.58 O
TER
Atoms:
OP1: (65.875,11.192,24.927)
OP2: (65.217,11.483,22.520)
C3': (67.125,6.967,22.406)
C1': (66.366,5.484,24.099)
C5': (67.169,8.917,24.037)
O6: (60.687,4.145,25.483)
O4': (66.859,6.642,24.733)
C8: (64.107,6.573,24.374)
C2: (63.617,2.340,24.993)
C6: (61.864,3.987,25.226)
C5: (62.882,4.902,24.849)
C4: (64.120,4.420,24.600)
P: (65.264,10.644,23.699)
C4': (67.535,7.492,23.770)
C2': (66.840,5.488,22.652)
O2': (68.026,4.728,22.596)
N1: (62.338,2.705,25.262)
N2: (63.917,1.043,25.089)
N3: (64.541,3.178,24.679)
N7: (62.882,6.277,24.692)
N9: (64.899,5.475,24.262)
O5': (65.955,9.276,23.383)
O3': (68.095,7.197,21.435)
OP2: (65.217,11.483,22.520)
C3': (67.125,6.967,22.406)
C1': (66.366,5.484,24.099)
C5': (67.169,8.917,24.037)
O6: (60.687,4.145,25.483)
O4': (66.859,6.642,24.733)
C8: (64.107,6.573,24.374)
C2: (63.617,2.340,24.993)
C6: (61.864,3.987,25.226)
C5: (62.882,4.902,24.849)
C4: (64.120,4.420,24.600)
P: (65.264,10.644,23.699)
C4': (67.535,7.492,23.770)
C2': (66.840,5.488,22.652)
O2': (68.026,4.728,22.596)
N1: (62.338,2.705,25.262)
N2: (63.917,1.043,25.089)
N3: (64.541,3.178,24.679)
N7: (62.882,6.277,24.692)
N9: (64.899,5.475,24.262)
O5': (65.955,9.276,23.383)
O3': (68.095,7.197,21.435)
C4: (66.655,-4.202,22.158)
N3: (65.787,-4.426,23.185)
OP1: (70.925,1.762,24.156)
OP2: (70.673,-0.315,22.774)
C2: (65.755,-3.667,24.328)
C1': (66.694,-1.897,25.749)
C3': (68.733,-1.184,26.851)
O5': (68.901,0.373,24.399)
O4': (66.781,-0.496,25.648)
C5': (68.571,1.015,25.615)
P: (70.073,0.849,23.458)
C4': (67.855,0.030,26.482)
C2': (67.974,-2.406,26.382)
O2': (67.699,-3.350,27.368)
N1: (66.561,-2.527,24.438)
O4: (66.653,-4.925,21.154)
O2: (64.947,-3.969,25.175)
C6: (67.514,-2.347,23.511)
C5: (67.532,-3.082,22.391)
O3': (69.157,-1.300,28.260)
N3: (65.787,-4.426,23.185)
OP1: (70.925,1.762,24.156)
OP2: (70.673,-0.315,22.774)
C2: (65.755,-3.667,24.328)
C1': (66.694,-1.897,25.749)
C3': (68.733,-1.184,26.851)
O5': (68.901,0.373,24.399)
O4': (66.781,-0.496,25.648)
C5': (68.571,1.015,25.615)
P: (70.073,0.849,23.458)
C4': (67.855,0.030,26.482)
C2': (67.974,-2.406,26.382)
O2': (67.699,-3.350,27.368)
N1: (66.561,-2.527,24.438)
O4: (66.653,-4.925,21.154)
O2: (64.947,-3.969,25.175)
C6: (67.514,-2.347,23.511)
C5: (67.532,-3.082,22.391)
O3': (69.157,-1.300,28.260)
Image (generated by PyMOL):