Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B59:B58
Extra
PDB:
ATOM 1 O3' U A 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 2 P G A 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 3 OP1 G A 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 4 OP2 G A 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 5 O5' G A 59 0.970 -35.935 4.596 1.00 64.46 O
ATOM 6 C5' G A 59 -0.411 -35.984 4.773 1.00 74.29 C
ATOM 7 C4' G A 59 -0.819 -37.393 5.143 1.00 82.39 C
ATOM 8 O4' G A 59 -0.998 -37.387 6.576 1.00 89.68 O
ATOM 9 C3' G A 59 -2.178 -37.775 4.589 1.00 84.39 C
ATOM 10 O3' G A 59 -2.044 -38.435 3.363 1.00 80.73 O
ATOM 11 C2' G A 59 -2.732 -38.683 5.671 1.00 90.96 C
ATOM 12 O2' G A 59 -2.152 -39.980 5.641 1.00 89.23 O
ATOM 13 C1' G A 59 -2.260 -37.939 6.918 1.00 94.75 C
ATOM 14 N9 G A 59 -3.193 -36.949 7.488 1.00101.39 N
ATOM 15 C8 G A 59 -4.127 -37.248 8.446 1.00104.75 C
ATOM 16 N7 G A 59 -4.848 -36.230 8.817 1.00106.86 N
ATOM 17 C5 G A 59 -4.371 -35.163 8.070 1.00106.84 C
ATOM 18 C6 G A 59 -4.779 -33.791 8.064 1.00108.86 C
ATOM 19 O6 G A 59 -5.672 -33.231 8.720 1.00107.64 O
ATOM 20 N1 G A 59 -4.033 -33.026 7.167 1.00109.39 N
ATOM 21 C2 G A 59 -3.019 -33.529 6.378 1.00106.94 C
ATOM 22 N2 G A 59 -2.418 -32.630 5.577 1.00106.23 N
ATOM 23 N3 G A 59 -2.630 -34.812 6.376 1.00103.50 N
ATOM 24 C4 G A 59 -3.343 -35.585 7.245 1.00103.90 C
ATOM 25 P C A 60 -2.894 -37.840 2.152 1.00 42.47 P
ATOM 26 OP1 C A 60 -2.734 -36.410 2.260 1.00 50.50 O
ATOM 27 OP2 C A 60 -4.239 -38.438 2.082 1.00 47.15 O
ATOM 28 O5' C A 60 -2.069 -38.220 0.834 1.00 53.35 O
TER
ATOM 1 O3' A B 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 2 P U B 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 3 OP1 U B 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 4 OP2 U B 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 5 O5' U B 58 3.252 -31.753 2.276 1.00 46.19 O
ATOM 6 C5' U B 58 2.142 -30.918 2.747 1.00 44.78 C
ATOM 7 C4' U B 58 0.844 -31.710 2.660 1.00 44.59 C
ATOM 8 O4' U B 58 0.342 -31.750 1.307 1.00 40.51 O
ATOM 9 C3' U B 58 0.983 -33.190 2.996 1.00 41.75 C
ATOM 10 O3' U B 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 11 C2' U B 58 -0.363 -33.654 2.496 1.00 43.15 C
ATOM 12 O2' U B 58 -1.368 -33.200 3.391 1.00 34.47 O
ATOM 13 C1' U B 58 -0.454 -32.922 1.170 1.00 39.36 C
ATOM 14 N1 U B 58 0.043 -33.739 0.030 1.00 38.07 N
ATOM 15 C2 U B 58 -0.916 -34.327 -0.682 1.00 38.92 C
ATOM 16 O2 U B 58 -2.063 -34.176 -0.355 1.00 43.42 O
ATOM 17 N3 U B 58 -0.525 -35.078 -1.763 1.00 40.62 N
ATOM 18 C4 U B 58 0.767 -35.270 -2.197 1.00 44.35 C
ATOM 19 O4 U B 58 0.968 -36.009 -3.180 1.00 45.68 O
ATOM 20 C5 U B 58 1.749 -34.573 -1.379 1.00 41.86 C
ATOM 21 C6 U B 58 1.360 -33.856 -0.313 1.00 39.74 C
ATOM 22 P G B 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 23 OP1 G B 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 24 OP2 G B 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 25 O5' G B 59 0.970 -35.935 4.596 1.00 64.46 O
TER
ATOM 2 P G A 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 3 OP1 G A 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 4 OP2 G A 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 5 O5' G A 59 0.970 -35.935 4.596 1.00 64.46 O
ATOM 6 C5' G A 59 -0.411 -35.984 4.773 1.00 74.29 C
ATOM 7 C4' G A 59 -0.819 -37.393 5.143 1.00 82.39 C
ATOM 8 O4' G A 59 -0.998 -37.387 6.576 1.00 89.68 O
ATOM 9 C3' G A 59 -2.178 -37.775 4.589 1.00 84.39 C
ATOM 10 O3' G A 59 -2.044 -38.435 3.363 1.00 80.73 O
ATOM 11 C2' G A 59 -2.732 -38.683 5.671 1.00 90.96 C
ATOM 12 O2' G A 59 -2.152 -39.980 5.641 1.00 89.23 O
ATOM 13 C1' G A 59 -2.260 -37.939 6.918 1.00 94.75 C
ATOM 14 N9 G A 59 -3.193 -36.949 7.488 1.00101.39 N
ATOM 15 C8 G A 59 -4.127 -37.248 8.446 1.00104.75 C
ATOM 16 N7 G A 59 -4.848 -36.230 8.817 1.00106.86 N
ATOM 17 C5 G A 59 -4.371 -35.163 8.070 1.00106.84 C
ATOM 18 C6 G A 59 -4.779 -33.791 8.064 1.00108.86 C
ATOM 19 O6 G A 59 -5.672 -33.231 8.720 1.00107.64 O
ATOM 20 N1 G A 59 -4.033 -33.026 7.167 1.00109.39 N
ATOM 21 C2 G A 59 -3.019 -33.529 6.378 1.00106.94 C
ATOM 22 N2 G A 59 -2.418 -32.630 5.577 1.00106.23 N
ATOM 23 N3 G A 59 -2.630 -34.812 6.376 1.00103.50 N
ATOM 24 C4 G A 59 -3.343 -35.585 7.245 1.00103.90 C
ATOM 25 P C A 60 -2.894 -37.840 2.152 1.00 42.47 P
ATOM 26 OP1 C A 60 -2.734 -36.410 2.260 1.00 50.50 O
ATOM 27 OP2 C A 60 -4.239 -38.438 2.082 1.00 47.15 O
ATOM 28 O5' C A 60 -2.069 -38.220 0.834 1.00 53.35 O
TER
ATOM 1 O3' A B 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 2 P U B 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 3 OP1 U B 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 4 OP2 U B 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 5 O5' U B 58 3.252 -31.753 2.276 1.00 46.19 O
ATOM 6 C5' U B 58 2.142 -30.918 2.747 1.00 44.78 C
ATOM 7 C4' U B 58 0.844 -31.710 2.660 1.00 44.59 C
ATOM 8 O4' U B 58 0.342 -31.750 1.307 1.00 40.51 O
ATOM 9 C3' U B 58 0.983 -33.190 2.996 1.00 41.75 C
ATOM 10 O3' U B 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 11 C2' U B 58 -0.363 -33.654 2.496 1.00 43.15 C
ATOM 12 O2' U B 58 -1.368 -33.200 3.391 1.00 34.47 O
ATOM 13 C1' U B 58 -0.454 -32.922 1.170 1.00 39.36 C
ATOM 14 N1 U B 58 0.043 -33.739 0.030 1.00 38.07 N
ATOM 15 C2 U B 58 -0.916 -34.327 -0.682 1.00 38.92 C
ATOM 16 O2 U B 58 -2.063 -34.176 -0.355 1.00 43.42 O
ATOM 17 N3 U B 58 -0.525 -35.078 -1.763 1.00 40.62 N
ATOM 18 C4 U B 58 0.767 -35.270 -2.197 1.00 44.35 C
ATOM 19 O4 U B 58 0.968 -36.009 -3.180 1.00 45.68 O
ATOM 20 C5 U B 58 1.749 -34.573 -1.379 1.00 41.86 C
ATOM 21 C6 U B 58 1.360 -33.856 -0.313 1.00 39.74 C
ATOM 22 P G B 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 23 OP1 G B 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 24 OP2 G B 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 25 O5' G B 59 0.970 -35.935 4.596 1.00 64.46 O
TER
Atoms:
OP1: (1.632,-34.654,6.540)
OP2: (3.170,-34.828,4.588)
C3': (-2.178,-37.775,4.589)
C1': (-2.260,-37.939,6.918)
C5': (-0.411,-35.984,4.773)
O6: (-5.672,-33.231,8.720)
O4': (-0.998,-37.387,6.576)
C8: (-4.127,-37.248,8.446)
C2: (-3.019,-33.529,6.378)
C6: (-4.779,-33.791,8.064)
C5: (-4.371,-35.163,8.070)
C4: (-3.343,-35.585,7.245)
P: (1.804,-34.705,5.097)
C4': (-0.819,-37.393,5.143)
C2': (-2.732,-38.683,5.671)
O2': (-2.152,-39.980,5.641)
N1: (-4.033,-33.026,7.167)
N2: (-2.418,-32.630,5.577)
N3: (-2.630,-34.812,6.376)
N7: (-4.848,-36.230,8.817)
N9: (-3.193,-36.949,7.488)
O5': (0.970,-35.935,4.596)
O3': (-2.044,-38.435,3.363)
OP2: (3.170,-34.828,4.588)
C3': (-2.178,-37.775,4.589)
C1': (-2.260,-37.939,6.918)
C5': (-0.411,-35.984,4.773)
O6: (-5.672,-33.231,8.720)
O4': (-0.998,-37.387,6.576)
C8: (-4.127,-37.248,8.446)
C2: (-3.019,-33.529,6.378)
C6: (-4.779,-33.791,8.064)
C5: (-4.371,-35.163,8.070)
C4: (-3.343,-35.585,7.245)
P: (1.804,-34.705,5.097)
C4': (-0.819,-37.393,5.143)
C2': (-2.732,-38.683,5.671)
O2': (-2.152,-39.980,5.641)
N1: (-4.033,-33.026,7.167)
N2: (-2.418,-32.630,5.577)
N3: (-2.630,-34.812,6.376)
N7: (-4.848,-36.230,8.817)
N9: (-3.193,-36.949,7.488)
O5': (0.970,-35.935,4.596)
O3': (-2.044,-38.435,3.363)
C4: (0.767,-35.270,-2.197)
N3: (-0.525,-35.078,-1.763)
OP1: (5.199,-30.327,2.918)
OP2: (5.393,-31.909,0.943)
C2: (-0.916,-34.327,-0.682)
C1': (-0.454,-32.922,1.170)
C3': (0.983,-33.190,2.996)
O5': (3.252,-31.753,2.276)
O4': (0.342,-31.750,1.307)
C5': (2.142,-30.918,2.747)
P: (4.586,-31.004,1.774)
C4': (0.844,-31.710,2.660)
C2': (-0.363,-33.654,2.496)
O2': (-1.368,-33.200,3.391)
N1: (0.043,-33.739,0.030)
O4: (0.968,-36.009,-3.180)
O2: (-2.063,-34.176,-0.355)
C6: (1.360,-33.856,-0.313)
C5: (1.749,-34.573,-1.379)
O3': (0.999,-33.446,4.405)
N3: (-0.525,-35.078,-1.763)
OP1: (5.199,-30.327,2.918)
OP2: (5.393,-31.909,0.943)
C2: (-0.916,-34.327,-0.682)
C1': (-0.454,-32.922,1.170)
C3': (0.983,-33.190,2.996)
O5': (3.252,-31.753,2.276)
O4': (0.342,-31.750,1.307)
C5': (2.142,-30.918,2.747)
P: (4.586,-31.004,1.774)
C4': (0.844,-31.710,2.660)
C2': (-0.363,-33.654,2.496)
O2': (-1.368,-33.200,3.391)
N1: (0.043,-33.739,0.030)
O4: (0.968,-36.009,-3.180)
O2: (-2.063,-34.176,-0.355)
C6: (1.360,-33.856,-0.313)
C5: (1.749,-34.573,-1.379)
O3': (0.999,-33.446,4.405)
Image (generated by PyMOL):