Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2860:A2842
Extra
PDB:
ATOM 1 O3' U A2859 -12.460 -49.223 -51.429 1.00 7.41 O
ATOM 2 P G A2860 -13.130 -48.839 -52.855 1.00 0.02 P
ATOM 3 OP1 G A2860 -12.032 -48.660 -53.800 1.00 0.02 O
ATOM 4 OP2 G A2860 -14.058 -47.705 -52.631 1.00 0.02 O
ATOM 5 O5' G A2860 -13.944 -50.157 -53.229 1.00 0.02 O
ATOM 6 C5' G A2860 -15.310 -50.339 -52.844 1.00 0.02 C
ATOM 7 C4' G A2860 -15.464 -50.821 -51.418 1.00 0.02 C
ATOM 8 O4' G A2860 -16.484 -50.003 -50.801 1.00 0.02 O
ATOM 9 C3' G A2860 -15.930 -52.293 -51.225 1.00 0.02 C
ATOM 10 O3' G A2860 -15.302 -52.870 -50.041 1.00 0.02 O
ATOM 11 C2' G A2860 -17.430 -52.102 -50.988 1.00 0.02 C
ATOM 12 O2' G A2860 -18.075 -53.142 -50.295 1.00 0.02 O
ATOM 13 C1' G A2860 -17.424 -50.828 -50.182 1.00 0.02 C
ATOM 14 N9 G A2860 -18.698 -50.147 -50.143 1.00 0.01 N
ATOM 15 C8 G A2860 -19.707 -50.330 -51.037 1.00 0.01 C
ATOM 16 N7 G A2860 -20.758 -49.623 -50.735 1.00 0.01 N
ATOM 17 C5 G A2860 -20.401 -48.973 -49.563 1.00 0.01 C
ATOM 18 C6 G A2860 -21.150 -48.082 -48.774 1.00 0.01 C
ATOM 19 O6 G A2860 -22.294 -47.700 -48.995 1.00 0.01 O
ATOM 20 N1 G A2860 -20.489 -47.621 -47.654 1.00 0.01 N
ATOM 21 C2 G A2860 -19.221 -47.988 -47.339 1.00 0.01 C
ATOM 22 N2 G A2860 -18.764 -47.420 -46.201 1.00 0.01 N
ATOM 23 N3 G A2860 -18.489 -48.823 -48.080 1.00 0.01 N
ATOM 24 C4 G A2860 -19.138 -49.281 -49.168 1.00 0.01 C
ATOM 25 P A A2861 -15.412 -54.466 -49.663 1.00 0.01 P
ATOM 26 OP1 A A2861 -15.075 -55.247 -50.867 1.00 0.01 O
ATOM 27 OP2 A A2861 -16.702 -54.683 -49.031 1.00 0.01 O
ATOM 28 O5' A A2861 -14.275 -54.645 -48.570 1.00 0.01 O
TER
ATOM 1 O3' G B2841 -19.214 -46.902 -43.137 1.00 0.01 O
ATOM 2 P U B2842 -18.203 -45.732 -42.811 1.00 0.01 P
ATOM 3 OP1 U B2842 -18.484 -45.311 -41.443 1.00 0.01 O
ATOM 4 OP2 U B2842 -18.292 -44.745 -43.897 1.00 0.01 O
ATOM 5 O5' U B2842 -16.804 -46.455 -42.889 1.00 0.01 O
ATOM 6 C5' U B2842 -16.730 -47.837 -43.106 1.00 0.01 C
ATOM 7 C4' U B2842 -15.526 -48.221 -43.906 1.00 0.01 C
ATOM 8 O4' U B2842 -15.917 -48.429 -45.270 1.00 0.01 O
ATOM 9 C3' U B2842 -14.375 -47.217 -43.944 1.00 0.01 C
ATOM 10 O3' U B2842 -13.155 -47.907 -43.826 1.00 0.01 O
ATOM 11 C2' U B2842 -14.437 -46.665 -45.348 1.00 0.01 C
ATOM 12 O2' U B2842 -13.194 -46.272 -45.851 1.00 0.01 O
ATOM 13 C1' U B2842 -14.950 -47.855 -46.108 1.00 0.01 C
ATOM 14 N1 U B2842 -15.568 -47.515 -47.402 1.00 0.27 N
ATOM 15 C2 U B2842 -15.217 -48.269 -48.490 1.00 0.27 C
ATOM 16 O2 U B2842 -14.448 -49.218 -48.432 1.00 0.27 O
ATOM 17 N3 U B2842 -15.834 -47.873 -49.643 1.00 0.27 N
ATOM 18 C4 U B2842 -16.729 -46.840 -49.818 1.00 0.27 C
ATOM 19 O4 U B2842 -17.196 -46.603 -50.937 1.00 0.27 O
ATOM 20 C5 U B2842 -17.025 -46.111 -48.639 1.00 0.27 C
ATOM 21 C6 U B2842 -16.440 -46.469 -47.504 1.00 0.27 C
ATOM 22 P A B2843 -12.085 -47.456 -42.743 1.00 0.01 P
ATOM 23 OP1 A B2843 -12.531 -46.163 -42.226 1.00 0.01 O
ATOM 24 OP2 A B2843 -10.740 -47.566 -43.365 1.00 0.01 O
ATOM 25 O5' A B2843 -12.241 -48.557 -41.630 1.00 0.01 O
TER
ATOM 2 P G A2860 -13.130 -48.839 -52.855 1.00 0.02 P
ATOM 3 OP1 G A2860 -12.032 -48.660 -53.800 1.00 0.02 O
ATOM 4 OP2 G A2860 -14.058 -47.705 -52.631 1.00 0.02 O
ATOM 5 O5' G A2860 -13.944 -50.157 -53.229 1.00 0.02 O
ATOM 6 C5' G A2860 -15.310 -50.339 -52.844 1.00 0.02 C
ATOM 7 C4' G A2860 -15.464 -50.821 -51.418 1.00 0.02 C
ATOM 8 O4' G A2860 -16.484 -50.003 -50.801 1.00 0.02 O
ATOM 9 C3' G A2860 -15.930 -52.293 -51.225 1.00 0.02 C
ATOM 10 O3' G A2860 -15.302 -52.870 -50.041 1.00 0.02 O
ATOM 11 C2' G A2860 -17.430 -52.102 -50.988 1.00 0.02 C
ATOM 12 O2' G A2860 -18.075 -53.142 -50.295 1.00 0.02 O
ATOM 13 C1' G A2860 -17.424 -50.828 -50.182 1.00 0.02 C
ATOM 14 N9 G A2860 -18.698 -50.147 -50.143 1.00 0.01 N
ATOM 15 C8 G A2860 -19.707 -50.330 -51.037 1.00 0.01 C
ATOM 16 N7 G A2860 -20.758 -49.623 -50.735 1.00 0.01 N
ATOM 17 C5 G A2860 -20.401 -48.973 -49.563 1.00 0.01 C
ATOM 18 C6 G A2860 -21.150 -48.082 -48.774 1.00 0.01 C
ATOM 19 O6 G A2860 -22.294 -47.700 -48.995 1.00 0.01 O
ATOM 20 N1 G A2860 -20.489 -47.621 -47.654 1.00 0.01 N
ATOM 21 C2 G A2860 -19.221 -47.988 -47.339 1.00 0.01 C
ATOM 22 N2 G A2860 -18.764 -47.420 -46.201 1.00 0.01 N
ATOM 23 N3 G A2860 -18.489 -48.823 -48.080 1.00 0.01 N
ATOM 24 C4 G A2860 -19.138 -49.281 -49.168 1.00 0.01 C
ATOM 25 P A A2861 -15.412 -54.466 -49.663 1.00 0.01 P
ATOM 26 OP1 A A2861 -15.075 -55.247 -50.867 1.00 0.01 O
ATOM 27 OP2 A A2861 -16.702 -54.683 -49.031 1.00 0.01 O
ATOM 28 O5' A A2861 -14.275 -54.645 -48.570 1.00 0.01 O
TER
ATOM 1 O3' G B2841 -19.214 -46.902 -43.137 1.00 0.01 O
ATOM 2 P U B2842 -18.203 -45.732 -42.811 1.00 0.01 P
ATOM 3 OP1 U B2842 -18.484 -45.311 -41.443 1.00 0.01 O
ATOM 4 OP2 U B2842 -18.292 -44.745 -43.897 1.00 0.01 O
ATOM 5 O5' U B2842 -16.804 -46.455 -42.889 1.00 0.01 O
ATOM 6 C5' U B2842 -16.730 -47.837 -43.106 1.00 0.01 C
ATOM 7 C4' U B2842 -15.526 -48.221 -43.906 1.00 0.01 C
ATOM 8 O4' U B2842 -15.917 -48.429 -45.270 1.00 0.01 O
ATOM 9 C3' U B2842 -14.375 -47.217 -43.944 1.00 0.01 C
ATOM 10 O3' U B2842 -13.155 -47.907 -43.826 1.00 0.01 O
ATOM 11 C2' U B2842 -14.437 -46.665 -45.348 1.00 0.01 C
ATOM 12 O2' U B2842 -13.194 -46.272 -45.851 1.00 0.01 O
ATOM 13 C1' U B2842 -14.950 -47.855 -46.108 1.00 0.01 C
ATOM 14 N1 U B2842 -15.568 -47.515 -47.402 1.00 0.27 N
ATOM 15 C2 U B2842 -15.217 -48.269 -48.490 1.00 0.27 C
ATOM 16 O2 U B2842 -14.448 -49.218 -48.432 1.00 0.27 O
ATOM 17 N3 U B2842 -15.834 -47.873 -49.643 1.00 0.27 N
ATOM 18 C4 U B2842 -16.729 -46.840 -49.818 1.00 0.27 C
ATOM 19 O4 U B2842 -17.196 -46.603 -50.937 1.00 0.27 O
ATOM 20 C5 U B2842 -17.025 -46.111 -48.639 1.00 0.27 C
ATOM 21 C6 U B2842 -16.440 -46.469 -47.504 1.00 0.27 C
ATOM 22 P A B2843 -12.085 -47.456 -42.743 1.00 0.01 P
ATOM 23 OP1 A B2843 -12.531 -46.163 -42.226 1.00 0.01 O
ATOM 24 OP2 A B2843 -10.740 -47.566 -43.365 1.00 0.01 O
ATOM 25 O5' A B2843 -12.241 -48.557 -41.630 1.00 0.01 O
TER
Atoms:
OP1: (-12.032,-48.660,-53.800)
OP2: (-14.058,-47.705,-52.631)
C3': (-15.930,-52.293,-51.225)
C1': (-17.424,-50.828,-50.182)
C5': (-15.310,-50.339,-52.844)
O6: (-22.294,-47.700,-48.995)
O4': (-16.484,-50.003,-50.801)
C8: (-19.707,-50.330,-51.037)
C2: (-19.221,-47.988,-47.339)
C6: (-21.150,-48.082,-48.774)
C5: (-20.401,-48.973,-49.563)
C4: (-19.138,-49.281,-49.168)
P: (-13.130,-48.839,-52.855)
C4': (-15.464,-50.821,-51.418)
C2': (-17.430,-52.102,-50.988)
O2': (-18.075,-53.142,-50.295)
N1: (-20.489,-47.621,-47.654)
N2: (-18.764,-47.420,-46.201)
N3: (-18.489,-48.823,-48.080)
N7: (-20.758,-49.623,-50.735)
N9: (-18.698,-50.147,-50.143)
O5': (-13.944,-50.157,-53.229)
O3': (-15.302,-52.870,-50.041)
OP2: (-14.058,-47.705,-52.631)
C3': (-15.930,-52.293,-51.225)
C1': (-17.424,-50.828,-50.182)
C5': (-15.310,-50.339,-52.844)
O6: (-22.294,-47.700,-48.995)
O4': (-16.484,-50.003,-50.801)
C8: (-19.707,-50.330,-51.037)
C2: (-19.221,-47.988,-47.339)
C6: (-21.150,-48.082,-48.774)
C5: (-20.401,-48.973,-49.563)
C4: (-19.138,-49.281,-49.168)
P: (-13.130,-48.839,-52.855)
C4': (-15.464,-50.821,-51.418)
C2': (-17.430,-52.102,-50.988)
O2': (-18.075,-53.142,-50.295)
N1: (-20.489,-47.621,-47.654)
N2: (-18.764,-47.420,-46.201)
N3: (-18.489,-48.823,-48.080)
N7: (-20.758,-49.623,-50.735)
N9: (-18.698,-50.147,-50.143)
O5': (-13.944,-50.157,-53.229)
O3': (-15.302,-52.870,-50.041)
C4: (-16.729,-46.840,-49.818)
N3: (-15.834,-47.873,-49.643)
OP1: (-18.484,-45.311,-41.443)
OP2: (-18.292,-44.745,-43.897)
C2: (-15.217,-48.269,-48.490)
C1': (-14.950,-47.855,-46.108)
C3': (-14.375,-47.217,-43.944)
O5': (-16.804,-46.455,-42.889)
O4': (-15.917,-48.429,-45.270)
C5': (-16.730,-47.837,-43.106)
P: (-18.203,-45.732,-42.811)
C4': (-15.526,-48.221,-43.906)
C2': (-14.437,-46.665,-45.348)
O2': (-13.194,-46.272,-45.851)
N1: (-15.568,-47.515,-47.402)
O4: (-17.196,-46.603,-50.937)
O2: (-14.448,-49.218,-48.432)
C6: (-16.440,-46.469,-47.504)
C5: (-17.025,-46.111,-48.639)
O3': (-13.155,-47.907,-43.826)
N3: (-15.834,-47.873,-49.643)
OP1: (-18.484,-45.311,-41.443)
OP2: (-18.292,-44.745,-43.897)
C2: (-15.217,-48.269,-48.490)
C1': (-14.950,-47.855,-46.108)
C3': (-14.375,-47.217,-43.944)
O5': (-16.804,-46.455,-42.889)
O4': (-15.917,-48.429,-45.270)
C5': (-16.730,-47.837,-43.106)
P: (-18.203,-45.732,-42.811)
C4': (-15.526,-48.221,-43.906)
C2': (-14.437,-46.665,-45.348)
O2': (-13.194,-46.272,-45.851)
N1: (-15.568,-47.515,-47.402)
O4: (-17.196,-46.603,-50.937)
O2: (-14.448,-49.218,-48.432)
C6: (-16.440,-46.469,-47.504)
C5: (-17.025,-46.111,-48.639)
O3': (-13.155,-47.907,-43.826)
Image (generated by PyMOL):