Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1113:A1011
Extra
PDB:
ATOM 1 O3' U A1112 -123.830 -84.303 -22.527 1.00 3.83 O
ATOM 2 P G A1113 -122.316 -83.887 -22.648 1.00 0.01 P
ATOM 3 OP1 G A1113 -121.803 -83.818 -21.273 1.00 0.01 O
ATOM 4 OP2 G A1113 -122.253 -82.687 -23.534 1.00 0.01 O
ATOM 5 O5' G A1113 -121.694 -85.124 -23.379 1.00 0.01 O
ATOM 6 C5' G A1113 -121.830 -86.391 -22.804 1.00 0.01 C
ATOM 7 C4' G A1113 -121.099 -87.402 -23.593 1.00 0.01 C
ATOM 8 O4' G A1113 -121.753 -87.579 -24.868 1.00 0.01 O
ATOM 9 C3' G A1113 -119.685 -87.046 -23.988 1.00 0.01 C
ATOM 10 O3' G A1113 -118.766 -87.134 -22.915 1.00 0.01 O
ATOM 11 C2' G A1113 -119.455 -88.059 -25.083 1.00 0.01 C
ATOM 12 O2' G A1113 -119.349 -89.358 -24.521 1.00 0.01 O
ATOM 13 C1' G A1113 -120.792 -87.977 -25.816 1.00 0.01 C
ATOM 14 N9 G A1113 -120.763 -86.988 -26.892 1.00 0.01 N
ATOM 15 C8 G A1113 -121.324 -85.746 -26.924 1.00 0.01 C
ATOM 16 N7 G A1113 -121.078 -85.130 -28.047 1.00 0.01 N
ATOM 17 C5 G A1113 -120.318 -86.031 -28.770 1.00 0.01 C
ATOM 18 C6 G A1113 -119.753 -85.948 -30.054 1.00 0.01 C
ATOM 19 O6 G A1113 -119.804 -85.015 -30.865 1.00 0.01 O
ATOM 20 N1 G A1113 -119.070 -87.101 -30.397 1.00 0.01 N
ATOM 21 C2 G A1113 -118.942 -88.192 -29.609 1.00 0.01 C
ATOM 22 N2 G A1113 -118.235 -89.200 -30.119 1.00 0.01 N
ATOM 23 N3 G A1113 -119.460 -88.281 -28.409 1.00 0.01 N
ATOM 24 C4 G A1113 -120.124 -87.172 -28.068 1.00 0.01 C
ATOM 25 P C A1114 -117.581 -86.053 -22.750 1.00 0.01 P
ATOM 26 OP1 C A1114 -117.014 -86.252 -21.413 1.00 0.01 O
ATOM 27 OP2 C A1114 -118.121 -84.719 -23.102 1.00 0.01 O
ATOM 28 O5' C A1114 -116.547 -86.509 -23.850 1.00 0.01 O
TER
ATOM 1 O3' G B1010 -119.810 -97.072 -30.516 1.00 8.73 O
ATOM 2 P U B1011 -118.686 -96.433 -31.458 1.00 0.01 P
ATOM 3 OP1 U B1011 -119.377 -95.794 -32.604 1.00 0.01 O
ATOM 4 OP2 U B1011 -117.657 -97.468 -31.736 1.00 0.01 O
ATOM 5 O5' U B1011 -118.095 -95.329 -30.525 1.00 0.01 O
ATOM 6 C5' U B1011 -118.872 -94.214 -30.207 1.00 0.01 C
ATOM 7 C4' U B1011 -118.102 -93.311 -29.353 1.00 0.01 C
ATOM 8 O4' U B1011 -117.544 -94.089 -28.289 1.00 0.01 O
ATOM 9 C3' U B1011 -116.906 -92.678 -30.016 1.00 0.01 C
ATOM 10 O3' U B1011 -117.249 -91.531 -30.751 1.00 0.01 O
ATOM 11 C2' U B1011 -115.979 -92.409 -28.841 1.00 0.01 C
ATOM 12 O2' U B1011 -116.378 -91.246 -28.128 1.00 0.01 O
ATOM 13 C1' U B1011 -116.264 -93.619 -27.964 1.00 0.01 C
ATOM 14 N1 U B1011 -115.306 -94.707 -28.161 1.00 0.01 N
ATOM 15 C2 U B1011 -114.081 -94.405 -27.685 1.00 0.01 C
ATOM 16 O2 U B1011 -113.872 -93.305 -27.200 1.00 0.01 O
ATOM 17 N3 U B1011 -113.182 -95.419 -27.844 1.00 0.01 N
ATOM 18 C4 U B1011 -113.416 -96.664 -28.378 1.00 0.01 C
ATOM 19 O4 U B1011 -112.490 -97.455 -28.426 1.00 0.01 O
ATOM 20 C5 U B1011 -114.748 -96.900 -28.831 1.00 0.01 C
ATOM 21 C6 U B1011 -115.640 -95.924 -28.701 1.00 0.01 C
ATOM 22 P U B1012 -116.534 -91.227 -32.134 1.00 0.01 P
ATOM 23 OP1 U B1012 -117.224 -90.097 -32.739 1.00 0.01 O
ATOM 24 OP2 U B1012 -116.464 -92.480 -32.870 1.00 0.01 O
ATOM 25 O5' U B1012 -115.092 -90.781 -31.690 1.00 0.01 O
TER
ATOM 2 P G A1113 -122.316 -83.887 -22.648 1.00 0.01 P
ATOM 3 OP1 G A1113 -121.803 -83.818 -21.273 1.00 0.01 O
ATOM 4 OP2 G A1113 -122.253 -82.687 -23.534 1.00 0.01 O
ATOM 5 O5' G A1113 -121.694 -85.124 -23.379 1.00 0.01 O
ATOM 6 C5' G A1113 -121.830 -86.391 -22.804 1.00 0.01 C
ATOM 7 C4' G A1113 -121.099 -87.402 -23.593 1.00 0.01 C
ATOM 8 O4' G A1113 -121.753 -87.579 -24.868 1.00 0.01 O
ATOM 9 C3' G A1113 -119.685 -87.046 -23.988 1.00 0.01 C
ATOM 10 O3' G A1113 -118.766 -87.134 -22.915 1.00 0.01 O
ATOM 11 C2' G A1113 -119.455 -88.059 -25.083 1.00 0.01 C
ATOM 12 O2' G A1113 -119.349 -89.358 -24.521 1.00 0.01 O
ATOM 13 C1' G A1113 -120.792 -87.977 -25.816 1.00 0.01 C
ATOM 14 N9 G A1113 -120.763 -86.988 -26.892 1.00 0.01 N
ATOM 15 C8 G A1113 -121.324 -85.746 -26.924 1.00 0.01 C
ATOM 16 N7 G A1113 -121.078 -85.130 -28.047 1.00 0.01 N
ATOM 17 C5 G A1113 -120.318 -86.031 -28.770 1.00 0.01 C
ATOM 18 C6 G A1113 -119.753 -85.948 -30.054 1.00 0.01 C
ATOM 19 O6 G A1113 -119.804 -85.015 -30.865 1.00 0.01 O
ATOM 20 N1 G A1113 -119.070 -87.101 -30.397 1.00 0.01 N
ATOM 21 C2 G A1113 -118.942 -88.192 -29.609 1.00 0.01 C
ATOM 22 N2 G A1113 -118.235 -89.200 -30.119 1.00 0.01 N
ATOM 23 N3 G A1113 -119.460 -88.281 -28.409 1.00 0.01 N
ATOM 24 C4 G A1113 -120.124 -87.172 -28.068 1.00 0.01 C
ATOM 25 P C A1114 -117.581 -86.053 -22.750 1.00 0.01 P
ATOM 26 OP1 C A1114 -117.014 -86.252 -21.413 1.00 0.01 O
ATOM 27 OP2 C A1114 -118.121 -84.719 -23.102 1.00 0.01 O
ATOM 28 O5' C A1114 -116.547 -86.509 -23.850 1.00 0.01 O
TER
ATOM 1 O3' G B1010 -119.810 -97.072 -30.516 1.00 8.73 O
ATOM 2 P U B1011 -118.686 -96.433 -31.458 1.00 0.01 P
ATOM 3 OP1 U B1011 -119.377 -95.794 -32.604 1.00 0.01 O
ATOM 4 OP2 U B1011 -117.657 -97.468 -31.736 1.00 0.01 O
ATOM 5 O5' U B1011 -118.095 -95.329 -30.525 1.00 0.01 O
ATOM 6 C5' U B1011 -118.872 -94.214 -30.207 1.00 0.01 C
ATOM 7 C4' U B1011 -118.102 -93.311 -29.353 1.00 0.01 C
ATOM 8 O4' U B1011 -117.544 -94.089 -28.289 1.00 0.01 O
ATOM 9 C3' U B1011 -116.906 -92.678 -30.016 1.00 0.01 C
ATOM 10 O3' U B1011 -117.249 -91.531 -30.751 1.00 0.01 O
ATOM 11 C2' U B1011 -115.979 -92.409 -28.841 1.00 0.01 C
ATOM 12 O2' U B1011 -116.378 -91.246 -28.128 1.00 0.01 O
ATOM 13 C1' U B1011 -116.264 -93.619 -27.964 1.00 0.01 C
ATOM 14 N1 U B1011 -115.306 -94.707 -28.161 1.00 0.01 N
ATOM 15 C2 U B1011 -114.081 -94.405 -27.685 1.00 0.01 C
ATOM 16 O2 U B1011 -113.872 -93.305 -27.200 1.00 0.01 O
ATOM 17 N3 U B1011 -113.182 -95.419 -27.844 1.00 0.01 N
ATOM 18 C4 U B1011 -113.416 -96.664 -28.378 1.00 0.01 C
ATOM 19 O4 U B1011 -112.490 -97.455 -28.426 1.00 0.01 O
ATOM 20 C5 U B1011 -114.748 -96.900 -28.831 1.00 0.01 C
ATOM 21 C6 U B1011 -115.640 -95.924 -28.701 1.00 0.01 C
ATOM 22 P U B1012 -116.534 -91.227 -32.134 1.00 0.01 P
ATOM 23 OP1 U B1012 -117.224 -90.097 -32.739 1.00 0.01 O
ATOM 24 OP2 U B1012 -116.464 -92.480 -32.870 1.00 0.01 O
ATOM 25 O5' U B1012 -115.092 -90.781 -31.690 1.00 0.01 O
TER
Atoms:
OP1: (-121.803,-83.818,-21.273)
OP2: (-122.253,-82.687,-23.534)
C3': (-119.685,-87.046,-23.988)
C1': (-120.792,-87.977,-25.816)
C5': (-121.830,-86.391,-22.804)
O6: (-119.804,-85.015,-30.865)
O4': (-121.753,-87.579,-24.868)
C8: (-121.324,-85.746,-26.924)
C2: (-118.942,-88.192,-29.609)
C6: (-119.753,-85.948,-30.054)
C5: (-120.318,-86.031,-28.770)
C4: (-120.124,-87.172,-28.068)
P: (-122.316,-83.887,-22.648)
C4': (-121.099,-87.402,-23.593)
C2': (-119.455,-88.059,-25.083)
O2': (-119.349,-89.358,-24.521)
N1: (-119.070,-87.101,-30.397)
N2: (-118.235,-89.200,-30.119)
N3: (-119.460,-88.281,-28.409)
N7: (-121.078,-85.130,-28.047)
N9: (-120.763,-86.988,-26.892)
O5': (-121.694,-85.124,-23.379)
O3': (-118.766,-87.134,-22.915)
OP2: (-122.253,-82.687,-23.534)
C3': (-119.685,-87.046,-23.988)
C1': (-120.792,-87.977,-25.816)
C5': (-121.830,-86.391,-22.804)
O6: (-119.804,-85.015,-30.865)
O4': (-121.753,-87.579,-24.868)
C8: (-121.324,-85.746,-26.924)
C2: (-118.942,-88.192,-29.609)
C6: (-119.753,-85.948,-30.054)
C5: (-120.318,-86.031,-28.770)
C4: (-120.124,-87.172,-28.068)
P: (-122.316,-83.887,-22.648)
C4': (-121.099,-87.402,-23.593)
C2': (-119.455,-88.059,-25.083)
O2': (-119.349,-89.358,-24.521)
N1: (-119.070,-87.101,-30.397)
N2: (-118.235,-89.200,-30.119)
N3: (-119.460,-88.281,-28.409)
N7: (-121.078,-85.130,-28.047)
N9: (-120.763,-86.988,-26.892)
O5': (-121.694,-85.124,-23.379)
O3': (-118.766,-87.134,-22.915)
C4: (-113.416,-96.664,-28.378)
N3: (-113.182,-95.419,-27.844)
OP1: (-119.377,-95.794,-32.604)
OP2: (-117.657,-97.468,-31.736)
C2: (-114.081,-94.405,-27.685)
C1': (-116.264,-93.619,-27.964)
C3': (-116.906,-92.678,-30.016)
O5': (-118.095,-95.329,-30.525)
O4': (-117.544,-94.089,-28.289)
C5': (-118.872,-94.214,-30.207)
P: (-118.686,-96.433,-31.458)
C4': (-118.102,-93.311,-29.353)
C2': (-115.979,-92.409,-28.841)
O2': (-116.378,-91.246,-28.128)
N1: (-115.306,-94.707,-28.161)
O4: (-112.490,-97.455,-28.426)
O2: (-113.872,-93.305,-27.200)
C6: (-115.640,-95.924,-28.701)
C5: (-114.748,-96.900,-28.831)
O3': (-117.249,-91.531,-30.751)
N3: (-113.182,-95.419,-27.844)
OP1: (-119.377,-95.794,-32.604)
OP2: (-117.657,-97.468,-31.736)
C2: (-114.081,-94.405,-27.685)
C1': (-116.264,-93.619,-27.964)
C3': (-116.906,-92.678,-30.016)
O5': (-118.095,-95.329,-30.525)
O4': (-117.544,-94.089,-28.289)
C5': (-118.872,-94.214,-30.207)
P: (-118.686,-96.433,-31.458)
C4': (-118.102,-93.311,-29.353)
C2': (-115.979,-92.409,-28.841)
O2': (-116.378,-91.246,-28.128)
N1: (-115.306,-94.707,-28.161)
O4: (-112.490,-97.455,-28.426)
O2: (-113.872,-93.305,-27.200)
C6: (-115.640,-95.924,-28.701)
C5: (-114.748,-96.900,-28.831)
O3': (-117.249,-91.531,-30.751)
Image (generated by PyMOL):