Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A648:A659
Extra
PDB:
ATOM 1 O3' A A 647 -109.850 -69.443 76.252 1.00 77.51 O
ATOM 2 P G A 648 -109.843 -69.192 74.667 1.00 84.97 P
ATOM 3 OP1 G A 648 -109.600 -70.460 73.920 1.00 74.65 O
ATOM 4 OP2 G A 648 -108.964 -68.022 74.444 1.00 44.56 O
ATOM 5 O5' G A 648 -111.351 -68.692 74.463 1.00 88.30 O
ATOM 6 C5' G A 648 -112.153 -69.017 73.349 1.00 73.40 C
ATOM 7 C4' G A 648 -113.487 -68.324 73.552 1.00 77.67 C
ATOM 8 O4' G A 648 -113.809 -68.311 74.969 1.00 82.84 O
ATOM 9 C3' G A 648 -113.497 -66.865 73.121 1.00 77.53 C
ATOM 10 O3' G A 648 -113.977 -66.787 71.786 1.00 79.89 O
ATOM 11 C2' G A 648 -114.454 -66.189 74.104 1.00 76.42 C
ATOM 12 O2' G A 648 -115.802 -66.207 73.689 1.00 90.58 O
ATOM 13 C1' G A 648 -114.342 -67.054 75.347 1.00 75.74 C
ATOM 14 N9 G A 648 -113.510 -66.450 76.380 1.00 73.32 N
ATOM 15 C8 G A 648 -112.199 -66.727 76.667 1.00 77.83 C
ATOM 16 N7 G A 648 -111.728 -66.021 77.657 1.00 85.12 N
ATOM 17 C5 G A 648 -112.793 -65.226 78.054 1.00 77.56 C
ATOM 18 C6 G A 648 -112.883 -64.259 79.082 1.00 72.56 C
ATOM 19 O6 G A 648 -112.019 -63.897 79.879 1.00 74.96 O
ATOM 20 N1 G A 648 -114.140 -63.682 79.150 1.00 76.46 N
ATOM 21 C2 G A 648 -115.187 -64.004 78.317 1.00 85.65 C
ATOM 22 N2 G A 648 -116.336 -63.345 78.527 1.00 89.39 N
ATOM 23 N3 G A 648 -115.122 -64.906 77.346 1.00 89.57 N
ATOM 24 C4 G A 648 -113.896 -65.479 77.275 1.00 83.61 C
ATOM 25 P G A 649 -113.601 -65.526 70.873 1.00 67.61 P
ATOM 26 OP1 G A 649 -114.108 -65.800 69.505 1.00 76.84 O
ATOM 27 OP2 G A 649 -112.167 -65.236 71.088 1.00 66.35 O
ATOM 28 O5' G A 649 -114.468 -64.346 71.530 1.00 59.68 O
TER
ATOM 1 O3' G B 658 -120.691 -64.065 81.090 1.00 62.44 O
ATOM 2 P U B 659 -121.148 -62.525 81.198 1.00 77.82 P
ATOM 3 OP1 U B 659 -120.689 -62.050 82.524 1.00 73.66 O
ATOM 4 OP2 U B 659 -122.579 -62.414 80.832 1.00 90.84 O
ATOM 5 O5' U B 659 -120.356 -61.774 80.024 1.00 89.72 O
ATOM 6 C5' U B 659 -118.942 -61.811 79.887 1.00 73.75 C
ATOM 7 C4' U B 659 -118.611 -61.455 78.454 1.00 65.50 C
ATOM 8 O4' U B 659 -119.150 -62.477 77.581 1.00 72.97 O
ATOM 9 C3' U B 659 -119.283 -60.180 77.978 1.00 68.64 C
ATOM 10 O3' U B 659 -118.468 -59.067 78.267 1.00 72.19 O
ATOM 11 C2' U B 659 -119.398 -60.385 76.472 1.00 71.16 C
ATOM 12 O2' U B 659 -118.219 -59.979 75.796 1.00 67.60 O
ATOM 13 C1' U B 659 -119.580 -61.899 76.357 1.00 74.58 C
ATOM 14 N1 U B 659 -120.980 -62.372 76.005 1.00 73.41 N
ATOM 15 C2 U B 659 -121.367 -62.380 74.674 1.00 76.35 C
ATOM 16 O2 U B 659 -120.655 -62.018 73.754 1.00 69.80 O
ATOM 17 N3 U B 659 -122.639 -62.834 74.439 1.00 82.59 N
ATOM 18 C4 U B 659 -123.557 -63.277 75.369 1.00 85.79 C
ATOM 19 O4 U B 659 -124.666 -63.652 74.977 1.00 85.21 O
ATOM 20 C5 U B 659 -123.080 -63.242 76.735 1.00 72.08 C
ATOM 21 C6 U B 659 -121.841 -62.804 76.999 1.00 61.51 C
ATOM 22 P C B 660 -119.157 -57.628 78.370 1.00 83.11 P
ATOM 23 OP1 C B 660 -118.166 -56.707 78.979 1.00 77.96 O
ATOM 24 OP2 C B 660 -120.479 -57.831 79.001 1.00 70.39 O
ATOM 25 O5' C B 660 -119.423 -57.182 76.854 1.00 80.85 O
TER
ATOM 2 P G A 648 -109.843 -69.192 74.667 1.00 84.97 P
ATOM 3 OP1 G A 648 -109.600 -70.460 73.920 1.00 74.65 O
ATOM 4 OP2 G A 648 -108.964 -68.022 74.444 1.00 44.56 O
ATOM 5 O5' G A 648 -111.351 -68.692 74.463 1.00 88.30 O
ATOM 6 C5' G A 648 -112.153 -69.017 73.349 1.00 73.40 C
ATOM 7 C4' G A 648 -113.487 -68.324 73.552 1.00 77.67 C
ATOM 8 O4' G A 648 -113.809 -68.311 74.969 1.00 82.84 O
ATOM 9 C3' G A 648 -113.497 -66.865 73.121 1.00 77.53 C
ATOM 10 O3' G A 648 -113.977 -66.787 71.786 1.00 79.89 O
ATOM 11 C2' G A 648 -114.454 -66.189 74.104 1.00 76.42 C
ATOM 12 O2' G A 648 -115.802 -66.207 73.689 1.00 90.58 O
ATOM 13 C1' G A 648 -114.342 -67.054 75.347 1.00 75.74 C
ATOM 14 N9 G A 648 -113.510 -66.450 76.380 1.00 73.32 N
ATOM 15 C8 G A 648 -112.199 -66.727 76.667 1.00 77.83 C
ATOM 16 N7 G A 648 -111.728 -66.021 77.657 1.00 85.12 N
ATOM 17 C5 G A 648 -112.793 -65.226 78.054 1.00 77.56 C
ATOM 18 C6 G A 648 -112.883 -64.259 79.082 1.00 72.56 C
ATOM 19 O6 G A 648 -112.019 -63.897 79.879 1.00 74.96 O
ATOM 20 N1 G A 648 -114.140 -63.682 79.150 1.00 76.46 N
ATOM 21 C2 G A 648 -115.187 -64.004 78.317 1.00 85.65 C
ATOM 22 N2 G A 648 -116.336 -63.345 78.527 1.00 89.39 N
ATOM 23 N3 G A 648 -115.122 -64.906 77.346 1.00 89.57 N
ATOM 24 C4 G A 648 -113.896 -65.479 77.275 1.00 83.61 C
ATOM 25 P G A 649 -113.601 -65.526 70.873 1.00 67.61 P
ATOM 26 OP1 G A 649 -114.108 -65.800 69.505 1.00 76.84 O
ATOM 27 OP2 G A 649 -112.167 -65.236 71.088 1.00 66.35 O
ATOM 28 O5' G A 649 -114.468 -64.346 71.530 1.00 59.68 O
TER
ATOM 1 O3' G B 658 -120.691 -64.065 81.090 1.00 62.44 O
ATOM 2 P U B 659 -121.148 -62.525 81.198 1.00 77.82 P
ATOM 3 OP1 U B 659 -120.689 -62.050 82.524 1.00 73.66 O
ATOM 4 OP2 U B 659 -122.579 -62.414 80.832 1.00 90.84 O
ATOM 5 O5' U B 659 -120.356 -61.774 80.024 1.00 89.72 O
ATOM 6 C5' U B 659 -118.942 -61.811 79.887 1.00 73.75 C
ATOM 7 C4' U B 659 -118.611 -61.455 78.454 1.00 65.50 C
ATOM 8 O4' U B 659 -119.150 -62.477 77.581 1.00 72.97 O
ATOM 9 C3' U B 659 -119.283 -60.180 77.978 1.00 68.64 C
ATOM 10 O3' U B 659 -118.468 -59.067 78.267 1.00 72.19 O
ATOM 11 C2' U B 659 -119.398 -60.385 76.472 1.00 71.16 C
ATOM 12 O2' U B 659 -118.219 -59.979 75.796 1.00 67.60 O
ATOM 13 C1' U B 659 -119.580 -61.899 76.357 1.00 74.58 C
ATOM 14 N1 U B 659 -120.980 -62.372 76.005 1.00 73.41 N
ATOM 15 C2 U B 659 -121.367 -62.380 74.674 1.00 76.35 C
ATOM 16 O2 U B 659 -120.655 -62.018 73.754 1.00 69.80 O
ATOM 17 N3 U B 659 -122.639 -62.834 74.439 1.00 82.59 N
ATOM 18 C4 U B 659 -123.557 -63.277 75.369 1.00 85.79 C
ATOM 19 O4 U B 659 -124.666 -63.652 74.977 1.00 85.21 O
ATOM 20 C5 U B 659 -123.080 -63.242 76.735 1.00 72.08 C
ATOM 21 C6 U B 659 -121.841 -62.804 76.999 1.00 61.51 C
ATOM 22 P C B 660 -119.157 -57.628 78.370 1.00 83.11 P
ATOM 23 OP1 C B 660 -118.166 -56.707 78.979 1.00 77.96 O
ATOM 24 OP2 C B 660 -120.479 -57.831 79.001 1.00 70.39 O
ATOM 25 O5' C B 660 -119.423 -57.182 76.854 1.00 80.85 O
TER
Atoms:
OP1: (-109.600,-70.460,73.920)
OP2: (-108.964,-68.022,74.444)
C3': (-113.497,-66.865,73.121)
C1': (-114.342,-67.054,75.347)
C5': (-112.153,-69.017,73.349)
O6: (-112.019,-63.897,79.879)
O4': (-113.809,-68.311,74.969)
C8: (-112.199,-66.727,76.667)
C2: (-115.187,-64.004,78.317)
C6: (-112.883,-64.259,79.082)
C5: (-112.793,-65.226,78.054)
C4: (-113.896,-65.479,77.275)
P: (-109.843,-69.192,74.667)
C4': (-113.487,-68.324,73.552)
C2': (-114.454,-66.189,74.104)
O2': (-115.802,-66.207,73.689)
N1: (-114.140,-63.682,79.150)
N2: (-116.336,-63.345,78.527)
N3: (-115.122,-64.906,77.346)
N7: (-111.728,-66.021,77.657)
N9: (-113.510,-66.450,76.380)
O5': (-111.351,-68.692,74.463)
O3': (-113.977,-66.787,71.786)
OP2: (-108.964,-68.022,74.444)
C3': (-113.497,-66.865,73.121)
C1': (-114.342,-67.054,75.347)
C5': (-112.153,-69.017,73.349)
O6: (-112.019,-63.897,79.879)
O4': (-113.809,-68.311,74.969)
C8: (-112.199,-66.727,76.667)
C2: (-115.187,-64.004,78.317)
C6: (-112.883,-64.259,79.082)
C5: (-112.793,-65.226,78.054)
C4: (-113.896,-65.479,77.275)
P: (-109.843,-69.192,74.667)
C4': (-113.487,-68.324,73.552)
C2': (-114.454,-66.189,74.104)
O2': (-115.802,-66.207,73.689)
N1: (-114.140,-63.682,79.150)
N2: (-116.336,-63.345,78.527)
N3: (-115.122,-64.906,77.346)
N7: (-111.728,-66.021,77.657)
N9: (-113.510,-66.450,76.380)
O5': (-111.351,-68.692,74.463)
O3': (-113.977,-66.787,71.786)
C4: (-123.557,-63.277,75.369)
N3: (-122.639,-62.834,74.439)
OP1: (-120.689,-62.050,82.524)
OP2: (-122.579,-62.414,80.832)
C2: (-121.367,-62.380,74.674)
C1': (-119.580,-61.899,76.357)
C3': (-119.283,-60.180,77.978)
O5': (-120.356,-61.774,80.024)
O4': (-119.150,-62.477,77.581)
C5': (-118.942,-61.811,79.887)
P: (-121.148,-62.525,81.198)
C4': (-118.611,-61.455,78.454)
C2': (-119.398,-60.385,76.472)
O2': (-118.219,-59.979,75.796)
N1: (-120.980,-62.372,76.005)
O4: (-124.666,-63.652,74.977)
O2: (-120.655,-62.018,73.754)
C6: (-121.841,-62.804,76.999)
C5: (-123.080,-63.242,76.735)
O3': (-118.468,-59.067,78.267)
N3: (-122.639,-62.834,74.439)
OP1: (-120.689,-62.050,82.524)
OP2: (-122.579,-62.414,80.832)
C2: (-121.367,-62.380,74.674)
C1': (-119.580,-61.899,76.357)
C3': (-119.283,-60.180,77.978)
O5': (-120.356,-61.774,80.024)
O4': (-119.150,-62.477,77.581)
C5': (-118.942,-61.811,79.887)
P: (-121.148,-62.525,81.198)
C4': (-118.611,-61.455,78.454)
C2': (-119.398,-60.385,76.472)
O2': (-118.219,-59.979,75.796)
N1: (-120.980,-62.372,76.005)
O4: (-124.666,-63.652,74.977)
O2: (-120.655,-62.018,73.754)
C6: (-121.841,-62.804,76.999)
C5: (-123.080,-63.242,76.735)
O3': (-118.468,-59.067,78.267)
Image (generated by PyMOL):