ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:E35:E86

Extra

PDB:
ATOM 1 O3' G A 34 65.787 9.703 -20.196 1.00102.71 O
ATOM 2 P A A 35 66.171 8.201 -20.601 1.00108.71 P
ATOM 3 OP1 A A 35 67.642 8.150 -20.756 1.00105.87 O
ATOM 4 OP2 A A 35 65.303 7.812 -21.734 1.00 94.30 O
ATOM 5 O5' A A 35 65.751 7.326 -19.326 1.00 85.29 O
ATOM 6 C5' A A 35 66.638 6.319 -18.831 1.00 79.56 C
ATOM 7 C4' A A 35 66.197 4.903 -19.164 1.00 69.88 C
ATOM 8 O4' A A 35 64.937 4.613 -18.505 1.00 64.47 O
ATOM 9 C3' A A 35 65.959 4.601 -20.639 1.00 67.62 C
ATOM 10 O3' A A 35 67.173 4.213 -21.281 1.00 69.29 O
ATOM 11 C2' A A 35 64.986 3.434 -20.529 1.00 67.53 C
ATOM 12 O2' A A 35 65.622 2.232 -20.140 1.00 58.72 O
ATOM 13 C1' A A 35 64.086 3.937 -19.408 1.00 65.06 C
ATOM 14 N9 A A 35 63.073 4.877 -19.875 1.00 60.13 N
ATOM 15 C8 A A 35 63.092 6.238 -19.763 1.00 62.62 C
ATOM 16 N7 A A 35 62.040 6.826 -20.280 1.00 63.97 N
ATOM 17 C5 A A 35 61.278 5.777 -20.766 1.00 53.98 C
ATOM 18 C6 A A 35 60.039 5.731 -21.432 1.00 57.86 C
ATOM 19 N6 A A 35 59.323 6.820 -21.732 1.00 66.56 N
ATOM 20 N1 A A 35 59.561 4.519 -21.780 1.00 55.91 N
ATOM 21 C2 A A 35 60.278 3.431 -21.479 1.00 54.06 C
ATOM 22 N3 A A 35 61.452 3.350 -20.858 1.00 57.89 N
ATOM 23 C4 A A 35 61.901 4.569 -20.525 1.00 55.57 C
ATOM 24 P C A 36 67.279 4.191 -22.882 1.00 82.08 P
ATOM 25 OP1 C A 36 68.687 3.907 -23.234 1.00 71.59 O
ATOM 26 OP2 C A 36 66.621 5.407 -23.414 1.00 72.99 O
ATOM 27 O5' C A 36 66.417 2.903 -23.282 1.00 60.48 O
TER

ATOM 1 O3' C B 85 54.290 10.939 -23.618 1.00 92.88 O
ATOM 2 P A B 86 55.468 10.872 -22.540 1.00 87.99 P
ATOM 3 OP1 A B 86 55.091 11.784 -21.438 1.00 91.00 O
ATOM 4 OP2 A B 86 56.760 11.050 -23.239 1.00 79.99 O
ATOM 5 O5' A B 86 55.372 9.369 -21.995 1.00 79.99 O
ATOM 6 C5' A B 86 55.156 8.301 -22.910 1.00 67.61 C
ATOM 7 C4' A B 86 54.967 6.970 -22.201 1.00 73.58 C
ATOM 8 O4' A B 86 56.196 6.600 -21.524 1.00 73.49 O
ATOM 9 C3' A B 86 53.883 6.934 -21.129 1.00 69.81 C
ATOM 10 O3' A B 86 53.319 5.631 -21.050 1.00 69.24 O
ATOM 11 C2' A B 86 54.678 7.247 -19.866 1.00 70.49 C
ATOM 12 O2' A B 86 54.057 6.762 -18.692 1.00 71.43 O
ATOM 13 C1' A B 86 55.953 6.461 -20.139 1.00 65.72 C
ATOM 14 N9 A B 86 57.120 6.961 -19.420 1.00 64.54 N
ATOM 15 C8 A B 86 57.507 8.263 -19.268 1.00 66.54 C
ATOM 16 N7 A B 86 58.608 8.408 -18.570 1.00 63.07 N
ATOM 17 C5 A B 86 58.969 7.111 -18.244 1.00 54.08 C
ATOM 18 C6 A B 86 60.048 6.578 -17.512 1.00 55.42 C
ATOM 19 N6 A B 86 61.005 7.325 -16.951 1.00 55.81 N
ATOM 20 N1 A B 86 60.107 5.237 -17.376 1.00 62.18 N
ATOM 21 C2 A B 86 59.153 4.486 -17.937 1.00 57.39 C
ATOM 22 N3 A B 86 58.093 4.872 -18.646 1.00 57.57 N
ATOM 23 C4 A B 86 58.062 6.207 -18.762 1.00 57.67 C
ATOM 24 P G B 87 52.205 5.136 -22.089 1.00 67.99 P
ATOM 25 OP1 G B 87 52.726 5.308 -23.462 1.00 63.06 O
ATOM 26 OP2 G B 87 50.920 5.762 -21.715 1.00 73.15 O
ATOM 27 O5' G B 87 52.129 3.567 -21.779 1.00 69.51 O
TER

Atoms:
OP1: (67.642,8.150,-20.756)
OP2: (65.303,7.812,-21.734)
C3': (65.959,4.601,-20.639)
C1': (64.086,3.937,-19.408)
C5': (66.638,6.319,-18.831)
O4': (64.937,4.613,-18.505)
C8: (63.092,6.238,-19.763)
O2': (65.622,2.232,-20.140)
C6: (60.039,5.731,-21.432)
C5: (61.278,5.777,-20.766)
C4: (61.901,4.569,-20.525)
P: (66.171,8.201,-20.601)
C4': (66.197,4.903,-19.164)
C2': (64.986,3.434,-20.529)
C2: (60.278,3.431,-21.479)
N1: (59.561,4.519,-21.780)
N3: (61.452,3.350,-20.858)
N6: (59.323,6.820,-21.732)
N7: (62.040,6.826,-20.280)
N9: (63.073,4.877,-19.875)
O5': (65.751,7.326,-19.326)
O3': (67.173,4.213,-21.281)
OP1: (55.091,11.784,-21.438)
OP2: (56.760,11.050,-23.239)
C3': (53.883,6.934,-21.129)
C1': (55.953,6.461,-20.139)
C5': (55.156,8.301,-22.910)
O4': (56.196,6.600,-21.524)
C8: (57.507,8.263,-19.268)
O2': (54.057,6.762,-18.692)
C6: (60.048,6.578,-17.512)
C5: (58.969,7.111,-18.244)
C4: (58.062,6.207,-18.762)
P: (55.468,10.872,-22.540)
C4': (54.967,6.970,-22.201)
C2': (54.678,7.247,-19.866)
C2: (59.153,4.486,-17.937)
N1: (60.107,5.237,-17.376)
N3: (58.093,4.872,-18.646)
N6: (61.005,7.325,-16.951)
N7: (58.608,8.408,-18.570)
N9: (57.120,6.961,-19.420)
O5': (55.372,9.369,-21.995)
O3': (53.319,5.631,-21.050)
Image (generated by PyMOL):
PyMOL image
show in jmol