ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A348:A338

Extra

PDB:
ATOM 1 O3' C A 347 81.681 1.167 74.250 1.00 71.37 O
ATOM 2 P U A 348 82.467 1.974 75.405 1.00 77.14 P
ATOM 3 OP1 U A 348 82.058 3.396 75.394 1.00 76.46 O
ATOM 4 OP2 U A 348 83.915 1.632 75.260 1.00 77.02 O
ATOM 5 O5' U A 348 82.003 1.343 76.798 1.00 73.27 O
ATOM 6 C5' U A 348 80.888 0.451 76.923 1.00 74.57 C
ATOM 7 C4' U A 348 80.577 0.237 78.396 1.00 79.77 C
ATOM 8 O4' U A 348 80.020 1.468 78.933 1.00 78.58 O
ATOM 9 C3' U A 348 79.616 -0.894 78.784 1.00 83.00 C
ATOM 10 O3' U A 348 80.087 -1.550 79.975 1.00 88.33 O
ATOM 11 C2' U A 348 78.301 -0.160 79.053 1.00 73.26 C
ATOM 12 O2' U A 348 77.515 -0.772 80.050 1.00 70.93 O
ATOM 13 C1' U A 348 78.783 1.203 79.547 1.00 75.07 C
ATOM 14 N1 U A 348 77.869 2.302 79.211 1.00 82.51 N
ATOM 15 C2 U A 348 77.572 3.225 80.205 1.00 84.86 C
ATOM 16 O2 U A 348 78.062 3.180 81.329 1.00 85.97 O
ATOM 17 N3 U A 348 76.687 4.209 79.833 1.00 73.84 N
ATOM 18 C4 U A 348 76.081 4.366 78.602 1.00 77.65 C
ATOM 19 O4 U A 348 75.261 5.271 78.444 1.00 84.98 O
ATOM 20 C5 U A 348 76.450 3.392 77.625 1.00 77.13 C
ATOM 21 C6 U A 348 77.307 2.418 77.952 1.00 79.32 C
ATOM 22 P U A 349 80.796 -3.014 79.886 1.00 83.10 P
ATOM 23 OP1 U A 349 81.328 -3.344 81.225 1.00 84.24 O
ATOM 24 OP2 U A 349 81.716 -3.024 78.718 1.00 78.23 O
ATOM 25 O5' U A 349 79.598 -4.025 79.607 1.00 82.82 O
TER

ATOM 1 O3' A B 337 76.074 -0.890 76.378 1.00 69.46 O
ATOM 2 P G B 338 76.971 -0.839 75.046 1.00 70.45 P
ATOM 3 OP1 G B 338 78.233 -0.103 75.319 1.00 62.63 O
ATOM 4 OP2 G B 338 76.067 -0.371 73.963 1.00 75.04 O
ATOM 5 O5' G B 338 77.321 -2.368 74.768 1.00 75.20 O
ATOM 6 C5' G B 338 77.892 -3.187 75.787 1.00 76.73 C
ATOM 7 C4' G B 338 77.710 -4.652 75.457 1.00 75.34 C
ATOM 8 O4' G B 338 76.299 -5.017 75.546 1.00 75.13 O
ATOM 9 C3' G B 338 78.102 -5.066 74.049 1.00 76.50 C
ATOM 10 O3' G B 338 79.496 -5.220 73.837 1.00 72.57 O
ATOM 11 C2' G B 338 77.296 -6.344 73.854 1.00 79.51 C
ATOM 12 O2' G B 338 77.884 -7.471 74.476 1.00 77.43 O
ATOM 13 C1' G B 338 75.983 -5.976 74.543 1.00 74.84 C
ATOM 14 N9 G B 338 75.084 -5.353 73.568 1.00 74.65 N
ATOM 15 C8 G B 338 74.739 -4.023 73.484 1.00 76.04 C
ATOM 16 N7 G B 338 73.944 -3.762 72.480 1.00 81.74 N
ATOM 17 C5 G B 338 73.742 -4.994 71.866 1.00 80.06 C
ATOM 18 C6 G B 338 72.959 -5.348 70.721 1.00 78.43 C
ATOM 19 O6 G B 338 72.262 -4.621 70.002 1.00 75.35 O
ATOM 20 N1 G B 338 73.045 -6.709 70.446 1.00 77.33 N
ATOM 21 C2 G B 338 73.780 -7.614 71.166 1.00 81.30 C
ATOM 22 N2 G B 338 73.747 -8.877 70.735 1.00 80.46 N
ATOM 23 N3 G B 338 74.501 -7.305 72.231 1.00 83.82 N
ATOM 24 C4 G B 338 74.437 -5.987 72.525 1.00 78.70 C
ATOM 25 P U B 339 80.125 -4.792 72.413 1.00 77.88 P
ATOM 26 OP1 U B 339 81.462 -4.171 72.648 1.00 72.73 O
ATOM 27 OP2 U B 339 79.088 -4.037 71.649 1.00 79.64 O
ATOM 28 O5' U B 339 80.296 -6.162 71.614 1.00 78.73 O
TER

Atoms:
C4: (76.081,4.366,78.602)
N3: (76.687,4.209,79.833)
OP1: (82.058,3.396,75.394)
OP2: (83.915,1.632,75.260)
C2: (77.572,3.225,80.205)
C1': (78.783,1.203,79.547)
C3': (79.616,-0.894,78.784)
O5': (82.003,1.343,76.798)
O4': (80.020,1.468,78.933)
C5': (80.888,0.451,76.923)
P: (82.467,1.974,75.405)
C4': (80.577,0.237,78.396)
C2': (78.301,-0.160,79.053)
O2': (77.515,-0.772,80.050)
N1: (77.869,2.302,79.211)
O4: (75.261,5.271,78.444)
O2: (78.062,3.180,81.329)
C6: (77.307,2.418,77.952)
C5: (76.450,3.392,77.625)
O3': (80.087,-1.550,79.975)
OP1: (78.233,-0.103,75.319)
OP2: (76.067,-0.371,73.963)
C3': (78.102,-5.066,74.049)
C1': (75.983,-5.976,74.543)
C5': (77.892,-3.187,75.787)
O6: (72.262,-4.621,70.002)
O4': (76.299,-5.017,75.546)
C8: (74.739,-4.023,73.484)
C2: (73.780,-7.614,71.166)
C6: (72.959,-5.348,70.721)
C5: (73.742,-4.994,71.866)
C4: (74.437,-5.987,72.525)
P: (76.971,-0.839,75.046)
C4': (77.710,-4.652,75.457)
C2': (77.296,-6.344,73.854)
O2': (77.884,-7.471,74.476)
N1: (73.045,-6.709,70.446)
N2: (73.747,-8.877,70.735)
N3: (74.501,-7.305,72.231)
N7: (73.944,-3.762,72.480)
N9: (75.084,-5.353,73.568)
O5': (77.321,-2.368,74.768)
O3': (79.496,-5.220,73.837)
Image (generated by PyMOL):
PyMOL image
show in jmol