Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1084:A1082
Extra
PDB:
ATOM 1 O3' U A1083 -103.876 57.683 -10.150 1.00 15.82 O
ATOM 2 P U A1084 -102.842 57.593 -8.923 1.00 58.87 P
ATOM 3 OP1 U A1084 -102.764 56.173 -8.506 1.00 58.87 O
ATOM 4 OP2 U A1084 -103.267 58.600 -7.927 1.00 58.87 O
ATOM 5 O5' U A1084 -101.477 58.037 -9.624 1.00 58.87 O
ATOM 6 C5' U A1084 -100.356 58.470 -8.872 1.00 58.87 C
ATOM 7 C4' U A1084 -99.593 57.306 -8.328 1.00 58.87 C
ATOM 8 O4' U A1084 -98.549 56.923 -9.263 1.00 58.87 O
ATOM 9 C3' U A1084 -98.909 57.559 -6.993 1.00 58.87 C
ATOM 10 O3' U A1084 -99.155 56.469 -6.119 1.00 58.87 O
ATOM 11 C2' U A1084 -97.425 57.627 -7.342 1.00 58.87 C
ATOM 12 O2' U A1084 -96.569 57.206 -6.301 1.00 58.87 O
ATOM 13 C1' U A1084 -97.354 56.696 -8.545 1.00 58.87 C
ATOM 14 N1 U A1084 -96.178 56.916 -9.454 1.00 60.02 N
ATOM 15 C2 U A1084 -95.040 56.097 -9.286 1.00 60.02 C
ATOM 16 O2 U A1084 -94.925 55.224 -8.430 1.00 60.02 O
ATOM 17 N3 U A1084 -93.998 56.335 -10.163 1.00 60.02 N
ATOM 18 C4 U A1084 -93.955 57.271 -11.183 1.00 60.02 C
ATOM 19 O4 U A1084 -92.941 57.350 -11.882 1.00 60.02 O
ATOM 20 C5 U A1084 -95.143 58.071 -11.304 1.00 60.02 C
ATOM 21 C6 U A1084 -96.182 57.868 -10.462 1.00 60.02 C
ATOM 22 P G A1085 -99.992 56.726 -4.780 1.00 43.41 P
ATOM 23 OP1 G A1085 -99.801 55.545 -3.898 1.00 43.41 O
ATOM 24 OP2 G A1085 -101.366 57.078 -5.200 1.00 43.41 O
ATOM 25 O5' G A1085 -99.246 58.004 -4.154 1.00 43.41 O
TER
ATOM 1 O3' U B1081 -97.808 59.826 -14.463 1.00 27.55 O
ATOM 2 P G B1082 -98.841 59.362 -13.339 1.00 21.15 P
ATOM 3 OP1 G B1082 -98.304 59.808 -12.037 1.00 21.15 O
ATOM 4 OP2 G B1082 -99.102 57.919 -13.549 1.00 21.15 O
ATOM 5 O5' G B1082 -100.136 60.199 -13.710 1.00 21.15 O
ATOM 6 C5' G B1082 -100.046 61.598 -13.920 1.00 21.15 C
ATOM 7 C4' G B1082 -101.003 62.057 -14.976 1.00 21.15 C
ATOM 8 O4' G B1082 -100.728 61.374 -16.227 1.00 21.15 O
ATOM 9 C3' G B1082 -102.467 61.760 -14.710 1.00 21.15 C
ATOM 10 O3' G B1082 -103.052 62.665 -13.806 1.00 21.15 O
ATOM 11 C2' G B1082 -103.069 61.829 -16.100 1.00 21.15 C
ATOM 12 O2' G B1082 -103.310 63.185 -16.484 1.00 21.15 O
ATOM 13 C1' G B1082 -101.930 61.234 -16.959 1.00 21.15 C
ATOM 14 N9 G B1082 -102.164 59.798 -17.245 1.00 21.34 N
ATOM 15 C8 G B1082 -102.179 58.774 -16.323 1.00 21.34 C
ATOM 16 N7 G B1082 -102.468 57.612 -16.844 1.00 21.34 N
ATOM 17 C5 G B1082 -102.683 57.885 -18.177 1.00 21.34 C
ATOM 18 C6 G B1082 -103.024 57.015 -19.232 1.00 21.34 C
ATOM 19 O6 G B1082 -103.220 55.793 -19.204 1.00 21.34 O
ATOM 20 N1 G B1082 -103.134 57.690 -20.434 1.00 21.34 N
ATOM 21 C2 G B1082 -102.944 59.032 -20.582 1.00 21.34 C
ATOM 22 N2 G B1082 -103.113 59.512 -21.825 1.00 21.34 N
ATOM 23 N3 G B1082 -102.614 59.842 -19.600 1.00 21.34 N
ATOM 24 C4 G B1082 -102.503 59.213 -18.438 1.00 21.34 C
ATOM 25 P U B1083 -104.546 62.422 -13.281 1.00 15.82 P
ATOM 26 OP1 U B1083 -105.310 61.822 -14.408 1.00 15.82 O
ATOM 27 OP2 U B1083 -105.026 63.715 -12.693 1.00 15.82 O
ATOM 28 O5' U B1083 -104.330 61.347 -12.125 1.00 15.82 O
TER
ATOM 2 P U A1084 -102.842 57.593 -8.923 1.00 58.87 P
ATOM 3 OP1 U A1084 -102.764 56.173 -8.506 1.00 58.87 O
ATOM 4 OP2 U A1084 -103.267 58.600 -7.927 1.00 58.87 O
ATOM 5 O5' U A1084 -101.477 58.037 -9.624 1.00 58.87 O
ATOM 6 C5' U A1084 -100.356 58.470 -8.872 1.00 58.87 C
ATOM 7 C4' U A1084 -99.593 57.306 -8.328 1.00 58.87 C
ATOM 8 O4' U A1084 -98.549 56.923 -9.263 1.00 58.87 O
ATOM 9 C3' U A1084 -98.909 57.559 -6.993 1.00 58.87 C
ATOM 10 O3' U A1084 -99.155 56.469 -6.119 1.00 58.87 O
ATOM 11 C2' U A1084 -97.425 57.627 -7.342 1.00 58.87 C
ATOM 12 O2' U A1084 -96.569 57.206 -6.301 1.00 58.87 O
ATOM 13 C1' U A1084 -97.354 56.696 -8.545 1.00 58.87 C
ATOM 14 N1 U A1084 -96.178 56.916 -9.454 1.00 60.02 N
ATOM 15 C2 U A1084 -95.040 56.097 -9.286 1.00 60.02 C
ATOM 16 O2 U A1084 -94.925 55.224 -8.430 1.00 60.02 O
ATOM 17 N3 U A1084 -93.998 56.335 -10.163 1.00 60.02 N
ATOM 18 C4 U A1084 -93.955 57.271 -11.183 1.00 60.02 C
ATOM 19 O4 U A1084 -92.941 57.350 -11.882 1.00 60.02 O
ATOM 20 C5 U A1084 -95.143 58.071 -11.304 1.00 60.02 C
ATOM 21 C6 U A1084 -96.182 57.868 -10.462 1.00 60.02 C
ATOM 22 P G A1085 -99.992 56.726 -4.780 1.00 43.41 P
ATOM 23 OP1 G A1085 -99.801 55.545 -3.898 1.00 43.41 O
ATOM 24 OP2 G A1085 -101.366 57.078 -5.200 1.00 43.41 O
ATOM 25 O5' G A1085 -99.246 58.004 -4.154 1.00 43.41 O
TER
ATOM 1 O3' U B1081 -97.808 59.826 -14.463 1.00 27.55 O
ATOM 2 P G B1082 -98.841 59.362 -13.339 1.00 21.15 P
ATOM 3 OP1 G B1082 -98.304 59.808 -12.037 1.00 21.15 O
ATOM 4 OP2 G B1082 -99.102 57.919 -13.549 1.00 21.15 O
ATOM 5 O5' G B1082 -100.136 60.199 -13.710 1.00 21.15 O
ATOM 6 C5' G B1082 -100.046 61.598 -13.920 1.00 21.15 C
ATOM 7 C4' G B1082 -101.003 62.057 -14.976 1.00 21.15 C
ATOM 8 O4' G B1082 -100.728 61.374 -16.227 1.00 21.15 O
ATOM 9 C3' G B1082 -102.467 61.760 -14.710 1.00 21.15 C
ATOM 10 O3' G B1082 -103.052 62.665 -13.806 1.00 21.15 O
ATOM 11 C2' G B1082 -103.069 61.829 -16.100 1.00 21.15 C
ATOM 12 O2' G B1082 -103.310 63.185 -16.484 1.00 21.15 O
ATOM 13 C1' G B1082 -101.930 61.234 -16.959 1.00 21.15 C
ATOM 14 N9 G B1082 -102.164 59.798 -17.245 1.00 21.34 N
ATOM 15 C8 G B1082 -102.179 58.774 -16.323 1.00 21.34 C
ATOM 16 N7 G B1082 -102.468 57.612 -16.844 1.00 21.34 N
ATOM 17 C5 G B1082 -102.683 57.885 -18.177 1.00 21.34 C
ATOM 18 C6 G B1082 -103.024 57.015 -19.232 1.00 21.34 C
ATOM 19 O6 G B1082 -103.220 55.793 -19.204 1.00 21.34 O
ATOM 20 N1 G B1082 -103.134 57.690 -20.434 1.00 21.34 N
ATOM 21 C2 G B1082 -102.944 59.032 -20.582 1.00 21.34 C
ATOM 22 N2 G B1082 -103.113 59.512 -21.825 1.00 21.34 N
ATOM 23 N3 G B1082 -102.614 59.842 -19.600 1.00 21.34 N
ATOM 24 C4 G B1082 -102.503 59.213 -18.438 1.00 21.34 C
ATOM 25 P U B1083 -104.546 62.422 -13.281 1.00 15.82 P
ATOM 26 OP1 U B1083 -105.310 61.822 -14.408 1.00 15.82 O
ATOM 27 OP2 U B1083 -105.026 63.715 -12.693 1.00 15.82 O
ATOM 28 O5' U B1083 -104.330 61.347 -12.125 1.00 15.82 O
TER
Atoms:
C4: (-93.955,57.271,-11.183)
N3: (-93.998,56.335,-10.163)
OP1: (-102.764,56.173,-8.506)
OP2: (-103.267,58.600,-7.927)
C2: (-95.040,56.097,-9.286)
C1': (-97.354,56.696,-8.545)
C3': (-98.909,57.559,-6.993)
O5': (-101.477,58.037,-9.624)
O4': (-98.549,56.923,-9.263)
C5': (-100.356,58.470,-8.872)
P: (-102.842,57.593,-8.923)
C4': (-99.593,57.306,-8.328)
C2': (-97.425,57.627,-7.342)
O2': (-96.569,57.206,-6.301)
N1: (-96.178,56.916,-9.454)
O4: (-92.941,57.350,-11.882)
O2: (-94.925,55.224,-8.430)
C6: (-96.182,57.868,-10.462)
C5: (-95.143,58.071,-11.304)
O3': (-99.155,56.469,-6.119)
N3: (-93.998,56.335,-10.163)
OP1: (-102.764,56.173,-8.506)
OP2: (-103.267,58.600,-7.927)
C2: (-95.040,56.097,-9.286)
C1': (-97.354,56.696,-8.545)
C3': (-98.909,57.559,-6.993)
O5': (-101.477,58.037,-9.624)
O4': (-98.549,56.923,-9.263)
C5': (-100.356,58.470,-8.872)
P: (-102.842,57.593,-8.923)
C4': (-99.593,57.306,-8.328)
C2': (-97.425,57.627,-7.342)
O2': (-96.569,57.206,-6.301)
N1: (-96.178,56.916,-9.454)
O4: (-92.941,57.350,-11.882)
O2: (-94.925,55.224,-8.430)
C6: (-96.182,57.868,-10.462)
C5: (-95.143,58.071,-11.304)
O3': (-99.155,56.469,-6.119)
OP1: (-98.304,59.808,-12.037)
OP2: (-99.102,57.919,-13.549)
C3': (-102.467,61.760,-14.710)
C1': (-101.930,61.234,-16.959)
C5': (-100.046,61.598,-13.920)
O6: (-103.220,55.793,-19.204)
O4': (-100.728,61.374,-16.227)
C8: (-102.179,58.774,-16.323)
C2: (-102.944,59.032,-20.582)
C6: (-103.024,57.015,-19.232)
C5: (-102.683,57.885,-18.177)
C4: (-102.503,59.213,-18.438)
P: (-98.841,59.362,-13.339)
C4': (-101.003,62.057,-14.976)
C2': (-103.069,61.829,-16.100)
O2': (-103.310,63.185,-16.484)
N1: (-103.134,57.690,-20.434)
N2: (-103.113,59.512,-21.825)
N3: (-102.614,59.842,-19.600)
N7: (-102.468,57.612,-16.844)
N9: (-102.164,59.798,-17.245)
O5': (-100.136,60.199,-13.710)
O3': (-103.052,62.665,-13.806)
OP2: (-99.102,57.919,-13.549)
C3': (-102.467,61.760,-14.710)
C1': (-101.930,61.234,-16.959)
C5': (-100.046,61.598,-13.920)
O6: (-103.220,55.793,-19.204)
O4': (-100.728,61.374,-16.227)
C8: (-102.179,58.774,-16.323)
C2: (-102.944,59.032,-20.582)
C6: (-103.024,57.015,-19.232)
C5: (-102.683,57.885,-18.177)
C4: (-102.503,59.213,-18.438)
P: (-98.841,59.362,-13.339)
C4': (-101.003,62.057,-14.976)
C2': (-103.069,61.829,-16.100)
O2': (-103.310,63.185,-16.484)
N1: (-103.134,57.690,-20.434)
N2: (-103.113,59.512,-21.825)
N3: (-102.614,59.842,-19.600)
N7: (-102.468,57.612,-16.844)
N9: (-102.164,59.798,-17.245)
O5': (-100.136,60.199,-13.710)
O3': (-103.052,62.665,-13.806)
Image (generated by PyMOL):