ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1247:1248

Extra

PDB:
ATOM 1 O3' U A 246 81.309 -40.847 159.556 1.00163.00 O
ATOM 2 P U A 247 80.131 -40.326 160.529 1.00211.42 P
ATOM 3 OP1 U A 247 80.773 -39.702 161.712 1.00212.21 O
ATOM 4 OP2 U A 247 79.210 -41.466 160.743 1.00211.53 O
ATOM 5 O5' U A 247 79.413 -39.210 159.643 1.00210.50 O
ATOM 6 C5' U A 247 77.999 -39.204 159.476 1.00210.05 C
ATOM 7 C4' U A 247 77.608 -39.165 158.015 1.00209.06 C
ATOM 8 O4' U A 247 78.804 -39.091 157.191 1.00208.85 O
ATOM 9 C3' U A 247 76.886 -40.395 157.481 1.00208.79 C
ATOM 10 O3' U A 247 75.507 -40.451 157.805 1.00208.67 O
ATOM 11 C2' U A 247 77.177 -40.335 155.989 1.00207.96 C
ATOM 12 O2' U A 247 76.370 -39.355 155.354 1.00207.23 O
ATOM 13 C1' U A 247 78.622 -39.840 156.000 1.00208.23 C
ATOM 14 N1 U A 247 79.583 -40.968 156.002 1.00208.67 N
ATOM 15 C2 U A 247 80.849 -40.756 155.510 1.00208.66 C
ATOM 16 O2 U A 247 81.235 -39.678 155.116 1.00208.33 O
ATOM 17 N3 U A 247 81.672 -41.856 155.538 1.00209.09 N
ATOM 18 C4 U A 247 81.378 -43.132 155.978 1.00209.52 C
ATOM 19 O4 U A 247 82.224 -44.030 155.945 1.00209.90 O
ATOM 20 C5 U A 247 80.054 -43.264 156.459 1.00209.50 C
ATOM 21 C6 U A 247 79.227 -42.225 156.436 1.00209.07 C
ATOM 22 P G A 248 74.755 -41.879 157.888 1.00173.49 P
ATOM 23 OP1 G A 248 74.154 -42.135 156.552 1.00172.62 O
ATOM 24 OP2 G A 248 73.859 -41.837 159.074 1.00174.00 O
ATOM 25 O5' G A 248 75.956 -42.908 158.149 1.00174.12 O
TER

ATOM 1 O3' U B 247 75.507 -40.451 157.805 1.00208.67 O
ATOM 2 P G B 248 74.755 -41.879 157.888 1.00173.49 P
ATOM 3 OP1 G B 248 74.154 -42.135 156.552 1.00172.62 O
ATOM 4 OP2 G B 248 73.859 -41.837 159.074 1.00174.00 O
ATOM 5 O5' G B 248 75.956 -42.908 158.149 1.00174.12 O
ATOM 6 C5' G B 248 76.560 -43.040 159.441 1.00175.07 C
ATOM 7 C4' G B 248 76.288 -44.391 160.059 1.00175.65 C
ATOM 8 O4' G B 248 76.244 -45.394 159.021 1.00175.22 O
ATOM 9 C3' G B 248 77.322 -44.858 161.068 1.00176.62 C
ATOM 10 O3' G B 248 76.679 -45.635 162.086 1.00177.26 O
ATOM 11 C2' G B 248 78.271 -45.730 160.231 1.00176.52 C
ATOM 12 O2' G B 248 78.873 -46.795 160.947 1.00177.34 O
ATOM 13 C1' G B 248 77.374 -46.245 159.088 1.00175.71 C
ATOM 14 N9 G B 248 78.006 -46.192 157.759 1.00175.05 N
ATOM 15 C8 G B 248 77.600 -45.236 156.856 1.00174.22 C
ATOM 16 N7 G B 248 78.190 -45.290 155.703 1.00173.69 N
ATOM 17 C5 G B 248 79.054 -46.359 155.835 1.00174.21 C
ATOM 18 C6 G B 248 79.953 -46.866 154.872 1.00173.98 C
ATOM 19 O6 G B 248 80.147 -46.444 153.724 1.00173.28 O
ATOM 20 N1 G B 248 80.647 -47.962 155.368 1.00174.69 N
ATOM 21 C2 G B 248 80.489 -48.494 156.624 1.00175.51 C
ATOM 22 N2 G B 248 81.259 -49.556 156.901 1.00176.13 N
ATOM 23 N3 G B 248 79.647 -48.025 157.538 1.00175.74 N
ATOM 24 C4 G B 248 78.951 -46.957 157.084 1.00175.05 C
ATOM 25 P U B 249 75.908 -44.896 163.300 1.00192.10 P
ATOM 26 OP1 U B 249 75.079 -43.815 162.712 1.00191.32 O
ATOM 27 OP2 U B 249 76.937 -44.534 164.306 1.00192.91 O
ATOM 28 O5' U B 249 74.960 -46.035 163.880 1.00192.48 O
TER

Atoms:
C4: (81.378,-43.132,155.978)
N3: (81.672,-41.856,155.538)
OP1: (80.773,-39.702,161.712)
OP2: (79.210,-41.466,160.743)
C2: (80.849,-40.756,155.510)
C1': (78.622,-39.840,156.000)
C3': (76.886,-40.395,157.481)
O5': (79.413,-39.210,159.643)
O4': (78.804,-39.091,157.191)
C5': (77.999,-39.204,159.476)
P: (80.131,-40.326,160.529)
C4': (77.608,-39.165,158.015)
C2': (77.177,-40.335,155.989)
O2': (76.370,-39.355,155.354)
N1: (79.583,-40.968,156.002)
O4: (82.224,-44.030,155.945)
O2: (81.235,-39.678,155.116)
C6: (79.227,-42.225,156.436)
C5: (80.054,-43.264,156.459)
O3': (75.507,-40.451,157.805)
OP1: (74.154,-42.135,156.552)
OP2: (73.859,-41.837,159.074)
C3': (77.322,-44.858,161.068)
C1': (77.374,-46.245,159.088)
C5': (76.560,-43.040,159.441)
O6: (80.147,-46.444,153.724)
O4': (76.244,-45.394,159.021)
C8: (77.600,-45.236,156.856)
C2: (80.489,-48.494,156.624)
C6: (79.953,-46.866,154.872)
C5: (79.054,-46.359,155.835)
C4: (78.951,-46.957,157.084)
P: (74.755,-41.879,157.888)
C4': (76.288,-44.391,160.059)
C2': (78.271,-45.730,160.231)
O2': (78.873,-46.795,160.947)
N1: (80.647,-47.962,155.368)
N2: (81.259,-49.556,156.901)
N3: (79.647,-48.025,157.538)
N7: (78.190,-45.290,155.703)
N9: (78.006,-46.192,157.759)
O5': (75.956,-42.908,158.149)
O3': (76.679,-45.635,162.086)
Image (generated by PyMOL):
PyMOL image
show in jmol