ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1818:12702

Extra

PDB:
ATOM 1 O3' C A 817 17.328 28.006 74.565 1.00 38.70 O
ATOM 2 P U A 818 16.579 27.579 73.216 1.00 42.66 P
ATOM 3 OP1 U A 818 17.566 27.828 72.133 1.00 42.56 O
ATOM 4 OP2 U A 818 15.271 28.275 73.147 1.00 43.00 O
ATOM 5 O5' U A 818 16.394 26.037 73.413 1.00 42.33 O
ATOM 6 C5' U A 818 17.527 25.207 73.503 1.00 42.01 C
ATOM 7 C4' U A 818 17.580 24.493 74.819 1.00 41.91 C
ATOM 8 O4' U A 818 17.023 23.177 74.659 1.00 41.68 O
ATOM 9 C3' U A 818 18.944 24.190 75.355 1.00 41.71 C
ATOM 10 O3' U A 818 19.624 25.329 75.881 1.00 41.92 O
ATOM 11 C2' U A 818 18.642 23.059 76.348 1.00 41.56 C
ATOM 12 O2' U A 818 18.003 23.554 77.519 1.00 41.82 O
ATOM 13 C1' U A 818 17.595 22.300 75.575 1.00 41.48 C
ATOM 14 N1 U A 818 18.093 21.173 74.847 1.00 41.15 N
ATOM 15 C2 U A 818 18.225 20.065 75.595 1.00 40.96 C
ATOM 16 O2 U A 818 18.084 20.047 76.790 1.00 41.04 O
ATOM 17 N3 U A 818 18.579 18.995 74.896 1.00 40.68 N
ATOM 18 C4 U A 818 18.754 18.943 73.551 1.00 40.58 C
ATOM 19 O4 U A 818 19.081 17.839 73.141 1.00 40.33 O
ATOM 20 C5 U A 818 18.542 20.124 72.780 1.00 40.80 C
ATOM 21 C6 U A 818 18.187 21.193 73.476 1.00 41.08 C
ATOM 22 P G A 819 20.841 25.939 75.039 1.00 39.02 P
ATOM 23 OP1 G A 819 20.373 26.073 73.684 1.00 39.03 O
ATOM 24 OP2 G A 819 21.978 25.092 75.298 1.00 38.72 O
ATOM 25 O5' G A 819 21.069 27.387 75.609 1.00 39.36 O
TER

ATOM 1 O3' U B2701 16.958 22.836 68.792 1.00 44.33 O
ATOM 2 P G B2702 17.107 22.285 70.276 1.00 43.22 P
ATOM 3 OP1 G B2702 16.276 23.124 71.111 1.00 43.52 O
ATOM 4 OP2 G B2702 18.557 22.188 70.597 1.00 43.04 O
ATOM 5 O5' G B2702 16.499 20.836 70.181 1.00 43.01 O
ATOM 6 C5' G B2702 15.341 20.588 69.424 1.00 43.09 C
ATOM 7 C4' G B2702 15.248 19.147 69.060 1.00 42.83 C
ATOM 8 O4' G B2702 16.198 18.866 67.999 1.00 42.64 O
ATOM 9 C3' G B2702 15.579 18.181 70.197 1.00 42.62 C
ATOM 10 O3' G B2702 14.672 17.083 70.179 1.00 42.55 O
ATOM 11 C2' G B2702 16.964 17.686 69.815 1.00 42.35 C
ATOM 12 O2' G B2702 17.290 16.409 70.315 1.00 42.10 O
ATOM 13 C1' G B2702 16.857 17.682 68.306 1.00 42.35 C
ATOM 14 N9 G B2702 18.144 17.632 67.634 1.00 42.18 N
ATOM 15 C8 G B2702 18.514 16.728 66.660 1.00 41.98 C
ATOM 16 N7 G B2702 19.779 16.796 66.295 1.00 41.84 N
ATOM 17 C5 G B2702 20.269 17.802 67.133 1.00 41.96 C
ATOM 18 C6 G B2702 21.550 18.358 67.232 1.00 41.92 C
ATOM 19 O6 G B2702 22.511 18.045 66.579 1.00 41.76 O
ATOM 20 N1 G B2702 21.662 19.364 68.173 1.00 42.10 N
ATOM 21 C2 G B2702 20.630 19.779 68.946 1.00 42.30 C
ATOM 22 N2 G B2702 20.872 20.748 69.814 1.00 42.47 N
ATOM 23 N3 G B2702 19.415 19.286 68.875 1.00 42.34 N
ATOM 24 C4 G B2702 19.288 18.309 67.965 1.00 42.16 C
ATOM 25 P G B2703 13.298 17.149 70.994 1.00 45.75 P
ATOM 26 OP1 G B2703 13.417 18.225 71.977 1.00 45.95 O
ATOM 27 OP2 G B2703 13.021 15.760 71.483 1.00 45.56 O
ATOM 28 O5' G B2703 12.278 17.573 69.854 1.00 45.95 O
TER

Atoms:
C4: (18.754,18.943,73.551)
N3: (18.579,18.995,74.896)
OP1: (17.566,27.828,72.133)
OP2: (15.271,28.275,73.147)
C2: (18.225,20.065,75.595)
C1': (17.595,22.300,75.575)
C3': (18.944,24.190,75.355)
O5': (16.394,26.037,73.413)
O4': (17.023,23.177,74.659)
C5': (17.527,25.207,73.503)
P: (16.579,27.579,73.216)
C4': (17.580,24.493,74.819)
C2': (18.642,23.059,76.348)
O2': (18.003,23.554,77.519)
N1: (18.093,21.173,74.847)
O4: (19.081,17.839,73.141)
O2: (18.084,20.047,76.790)
C6: (18.187,21.193,73.476)
C5: (18.542,20.124,72.780)
O3': (19.624,25.329,75.881)
OP1: (16.276,23.124,71.111)
OP2: (18.557,22.188,70.597)
C3': (15.579,18.181,70.197)
C1': (16.857,17.682,68.306)
C5': (15.341,20.588,69.424)
O6: (22.511,18.045,66.579)
O4': (16.198,18.866,67.999)
C8: (18.514,16.728,66.660)
C2: (20.630,19.779,68.946)
C6: (21.550,18.358,67.232)
C5: (20.269,17.802,67.133)
C4: (19.288,18.309,67.965)
P: (17.107,22.285,70.276)
C4': (15.248,19.147,69.060)
C2': (16.964,17.686,69.815)
O2': (17.290,16.409,70.315)
N1: (21.662,19.364,68.173)
N2: (20.872,20.748,69.814)
N3: (19.415,19.286,68.875)
N7: (19.779,16.796,66.295)
N9: (18.144,17.632,67.634)
O5': (16.499,20.836,70.181)
O3': (14.672,17.083,70.179)
Image (generated by PyMOL):
PyMOL image
show in jmol