Doublet info:
Details
Nucleotide types:
CG
Description:
HS_cis: HS_cis
Program used:
JS
Has errors:
False
Source
PDB id:
SPEC:A1:B1
Extra
PDB:
ATOM 1 OP3 G A 2 19.111 21.666 69.129 1.00 47.94 O
ATOM 2 P G A 2 19.618 20.997 67.910 1.00 47.85 P
ATOM 3 OP1 G A 2 19.914 19.582 68.230 1.00 48.02 O
ATOM 4 OP2 G A 2 20.893 21.633 67.512 1.00 47.94 O
ATOM 5 O5' G A 2 18.581 21.064 66.686 1.00 46.65 O
ATOM 6 C5' G A 2 17.422 21.931 66.667 1.00 45.81 C
ATOM 7 C4' G A 2 17.851 23.393 66.491 1.00 45.33 C
ATOM 8 O4' G A 2 18.384 23.576 65.154 1.00 45.13 O
ATOM 9 C3' G A 2 16.599 24.277 66.612 1.00 44.82 C
ATOM 10 O3' G A 2 16.895 25.451 67.410 1.00 44.62 O
ATOM 11 C2' G A 2 16.335 24.683 65.166 1.00 45.01 C
ATOM 12 O2' G A 2 15.644 25.922 65.048 1.00 45.00 O
ATOM 13 C1' G A 2 17.739 24.726 64.570 1.00 45.25 C
ATOM 14 N9 G A 2 17.798 24.663 63.088 1.00 45.87 N
ATOM 15 C8 G A 2 16.761 24.737 62.180 1.00 46.31 C
ATOM 16 N7 G A 2 17.116 24.640 60.956 1.00 46.43 N
ATOM 17 C5 G A 2 18.474 24.506 61.001 1.00 46.59 C
ATOM 18 C6 G A 2 19.430 24.357 59.918 1.00 46.95 C
ATOM 19 O6 G A 2 19.233 24.313 58.706 1.00 47.75 O
ATOM 20 N1 G A 2 20.728 24.258 60.420 1.00 47.10 N
ATOM 21 C2 G A 2 21.070 24.295 61.744 1.00 47.22 C
ATOM 22 N2 G A 2 22.392 24.186 62.050 1.00 47.24 N
ATOM 23 N3 G A 2 20.205 24.428 62.715 1.00 47.21 N
ATOM 24 C4 G A 2 18.914 24.527 62.312 1.00 46.57 C
ATOM 25 H5'1 G A 2 16.903 21.799 67.601 1.00 0.00 H
ATOM 26 H5'2 G A 2 16.815 21.629 65.831 1.00 0.00 H
ATOM 27 H4' G A 2 18.596 23.678 67.211 1.00 0.00 H
ATOM 28 H3' G A 2 15.743 23.765 67.016 1.00 0.00 H
ATOM 29 H1' G A 2 18.224 25.638 64.858 1.00 0.00 H
ATOM 30 H2' G A 2 15.731 23.934 64.685 1.00 0.00 H
ATOM 31 HO'2 G A 2 14.838 25.887 65.567 1.00 0.00 H
ATOM 32 H8 G A 2 15.748 24.866 62.500 1.00 0.00 H
ATOM 33 H1 G A 2 21.447 24.151 59.738 1.00 0.00 H
ATOM 34 H21 G A 2 22.682 24.209 63.003 1.00 0.00 H
ATOM 35 H22 G A 2 23.066 24.084 61.325 1.00 0.00 H
TER
ATOM 36 P C B 3 16.389 25.631 68.924 1.00 44.43 P
ATOM 37 OP1 C B 3 15.116 24.918 69.175 1.00 45.57 O
ATOM 38 OP2 C B 3 16.196 27.073 69.200 1.00 45.70 O
ATOM 39 O5' C B 3 17.554 24.991 69.829 1.00 44.15 O
ATOM 40 C5' C B 3 18.694 25.748 70.303 1.00 44.67 C
ATOM 41 C4' C B 3 19.771 25.794 69.207 1.00 45.30 C
ATOM 42 O4' C B 3 20.376 24.479 69.140 1.00 45.24 O
ATOM 43 C3' C B 3 20.898 26.791 69.535 1.00 46.14 C
ATOM 44 O3' C B 3 20.526 27.817 70.494 1.00 48.23 O
ATOM 45 C2' C B 3 22.004 25.898 70.093 1.00 45.57 C
ATOM 46 O2' C B 3 21.865 25.677 71.493 1.00 46.29 O
ATOM 47 C1' C B 3 21.805 24.589 69.335 1.00 44.66 C
ATOM 48 N1 C B 3 22.565 24.499 68.053 1.00 43.66 N
ATOM 49 C2 C B 3 23.971 24.366 68.116 1.00 43.07 C
ATOM 50 O2 C B 3 24.574 24.363 69.190 1.00 42.63 O
ATOM 51 N3 C B 3 24.657 24.234 66.936 1.00 42.78 N
ATOM 52 C4 C B 3 24.057 24.243 65.783 1.00 43.16 C
ATOM 53 N4 C B 3 24.828 24.097 64.670 1.00 43.08 N
ATOM 54 C5 C B 3 22.626 24.404 65.656 1.00 43.04 C
ATOM 55 C6 C B 3 21.944 24.532 66.810 1.00 43.20 C
ATOM 56 H5'1 C B 3 19.079 25.234 71.166 1.00 0.00 H
ATOM 57 H5'2 C B 3 18.341 26.730 70.557 1.00 0.00 H
ATOM 58 H4' C B 3 19.341 26.034 68.252 1.00 0.00 H
ATOM 59 H3' C B 3 21.227 27.255 68.621 1.00 0.00 H
ATOM 60 H1' C B 3 22.164 23.770 69.925 1.00 0.00 H
ATOM 61 H2' C B 3 22.975 26.328 69.944 1.00 0.00 H
ATOM 62 HO'2 C B 3 21.867 26.523 71.946 1.00 0.00 H
ATOM 63 H6 C B 3 20.879 24.660 66.786 1.00 0.00 H
ATOM 64 H41 C B 3 24.406 24.098 63.769 1.00 0.00 H
ATOM 65 H42 C B 3 25.813 23.989 64.762 1.00 0.00 H
ATOM 66 H5 C B 3 22.092 24.424 64.732 1.00 0.00 H
ATOM 67 P G B 4 21.183 29.280 70.513 1.00 49.86 P
ATOM 68 OP1 G B 4 20.508 30.132 71.517 1.00 48.99 O
ATOM 69 OP2 G B 4 21.123 29.912 69.177 1.00 48.81 O
ATOM 70 O5' G B 4 22.707 28.995 70.908 1.00 50.30 O
TER
ATOM 2 P G A 2 19.618 20.997 67.910 1.00 47.85 P
ATOM 3 OP1 G A 2 19.914 19.582 68.230 1.00 48.02 O
ATOM 4 OP2 G A 2 20.893 21.633 67.512 1.00 47.94 O
ATOM 5 O5' G A 2 18.581 21.064 66.686 1.00 46.65 O
ATOM 6 C5' G A 2 17.422 21.931 66.667 1.00 45.81 C
ATOM 7 C4' G A 2 17.851 23.393 66.491 1.00 45.33 C
ATOM 8 O4' G A 2 18.384 23.576 65.154 1.00 45.13 O
ATOM 9 C3' G A 2 16.599 24.277 66.612 1.00 44.82 C
ATOM 10 O3' G A 2 16.895 25.451 67.410 1.00 44.62 O
ATOM 11 C2' G A 2 16.335 24.683 65.166 1.00 45.01 C
ATOM 12 O2' G A 2 15.644 25.922 65.048 1.00 45.00 O
ATOM 13 C1' G A 2 17.739 24.726 64.570 1.00 45.25 C
ATOM 14 N9 G A 2 17.798 24.663 63.088 1.00 45.87 N
ATOM 15 C8 G A 2 16.761 24.737 62.180 1.00 46.31 C
ATOM 16 N7 G A 2 17.116 24.640 60.956 1.00 46.43 N
ATOM 17 C5 G A 2 18.474 24.506 61.001 1.00 46.59 C
ATOM 18 C6 G A 2 19.430 24.357 59.918 1.00 46.95 C
ATOM 19 O6 G A 2 19.233 24.313 58.706 1.00 47.75 O
ATOM 20 N1 G A 2 20.728 24.258 60.420 1.00 47.10 N
ATOM 21 C2 G A 2 21.070 24.295 61.744 1.00 47.22 C
ATOM 22 N2 G A 2 22.392 24.186 62.050 1.00 47.24 N
ATOM 23 N3 G A 2 20.205 24.428 62.715 1.00 47.21 N
ATOM 24 C4 G A 2 18.914 24.527 62.312 1.00 46.57 C
ATOM 25 H5'1 G A 2 16.903 21.799 67.601 1.00 0.00 H
ATOM 26 H5'2 G A 2 16.815 21.629 65.831 1.00 0.00 H
ATOM 27 H4' G A 2 18.596 23.678 67.211 1.00 0.00 H
ATOM 28 H3' G A 2 15.743 23.765 67.016 1.00 0.00 H
ATOM 29 H1' G A 2 18.224 25.638 64.858 1.00 0.00 H
ATOM 30 H2' G A 2 15.731 23.934 64.685 1.00 0.00 H
ATOM 31 HO'2 G A 2 14.838 25.887 65.567 1.00 0.00 H
ATOM 32 H8 G A 2 15.748 24.866 62.500 1.00 0.00 H
ATOM 33 H1 G A 2 21.447 24.151 59.738 1.00 0.00 H
ATOM 34 H21 G A 2 22.682 24.209 63.003 1.00 0.00 H
ATOM 35 H22 G A 2 23.066 24.084 61.325 1.00 0.00 H
TER
ATOM 36 P C B 3 16.389 25.631 68.924 1.00 44.43 P
ATOM 37 OP1 C B 3 15.116 24.918 69.175 1.00 45.57 O
ATOM 38 OP2 C B 3 16.196 27.073 69.200 1.00 45.70 O
ATOM 39 O5' C B 3 17.554 24.991 69.829 1.00 44.15 O
ATOM 40 C5' C B 3 18.694 25.748 70.303 1.00 44.67 C
ATOM 41 C4' C B 3 19.771 25.794 69.207 1.00 45.30 C
ATOM 42 O4' C B 3 20.376 24.479 69.140 1.00 45.24 O
ATOM 43 C3' C B 3 20.898 26.791 69.535 1.00 46.14 C
ATOM 44 O3' C B 3 20.526 27.817 70.494 1.00 48.23 O
ATOM 45 C2' C B 3 22.004 25.898 70.093 1.00 45.57 C
ATOM 46 O2' C B 3 21.865 25.677 71.493 1.00 46.29 O
ATOM 47 C1' C B 3 21.805 24.589 69.335 1.00 44.66 C
ATOM 48 N1 C B 3 22.565 24.499 68.053 1.00 43.66 N
ATOM 49 C2 C B 3 23.971 24.366 68.116 1.00 43.07 C
ATOM 50 O2 C B 3 24.574 24.363 69.190 1.00 42.63 O
ATOM 51 N3 C B 3 24.657 24.234 66.936 1.00 42.78 N
ATOM 52 C4 C B 3 24.057 24.243 65.783 1.00 43.16 C
ATOM 53 N4 C B 3 24.828 24.097 64.670 1.00 43.08 N
ATOM 54 C5 C B 3 22.626 24.404 65.656 1.00 43.04 C
ATOM 55 C6 C B 3 21.944 24.532 66.810 1.00 43.20 C
ATOM 56 H5'1 C B 3 19.079 25.234 71.166 1.00 0.00 H
ATOM 57 H5'2 C B 3 18.341 26.730 70.557 1.00 0.00 H
ATOM 58 H4' C B 3 19.341 26.034 68.252 1.00 0.00 H
ATOM 59 H3' C B 3 21.227 27.255 68.621 1.00 0.00 H
ATOM 60 H1' C B 3 22.164 23.770 69.925 1.00 0.00 H
ATOM 61 H2' C B 3 22.975 26.328 69.944 1.00 0.00 H
ATOM 62 HO'2 C B 3 21.867 26.523 71.946 1.00 0.00 H
ATOM 63 H6 C B 3 20.879 24.660 66.786 1.00 0.00 H
ATOM 64 H41 C B 3 24.406 24.098 63.769 1.00 0.00 H
ATOM 65 H42 C B 3 25.813 23.989 64.762 1.00 0.00 H
ATOM 66 H5 C B 3 22.092 24.424 64.732 1.00 0.00 H
ATOM 67 P G B 4 21.183 29.280 70.513 1.00 49.86 P
ATOM 68 OP1 G B 4 20.508 30.132 71.517 1.00 48.99 O
ATOM 69 OP2 G B 4 21.123 29.912 69.177 1.00 48.81 O
ATOM 70 O5' G B 4 22.707 28.995 70.908 1.00 50.30 O
TER
Atoms:
OP1: (19.914,19.582,68.230)
OP2: (20.893,21.633,67.512)
OP3: (19.111,21.666,69.129)
C3': (16.599,24.277,66.612)
H21: (22.682,24.209,63.003)
H22: (23.066,24.084,61.325)
C5': (17.422,21.931,66.667)
O6: (19.233,24.313,58.706)
H2': (15.731,23.934,64.685)
H3': (15.743,23.765,67.016)
O4': (18.384,23.576,65.154)
C8: (16.761,24.737,62.180)
C2: (21.070,24.295,61.744)
N7: (17.116,24.640,60.956)
C6: (19.430,24.357,59.918)
C5: (18.474,24.506,61.001)
C4: (18.914,24.527,62.312)
C1': (17.739,24.726,64.570)
HO'2: (14.838,25.887,65.567)
P: (19.618,20.997,67.910)
C4': (17.851,23.393,66.491)
C2': (16.335,24.683,65.166)
H5'2: (16.815,21.629,65.831)
O2': (15.644,25.922,65.048)
N1: (20.728,24.258,60.420)
N2: (22.392,24.186,62.050)
N3: (20.205,24.428,62.715)
H1': (18.224,25.638,64.858)
H4': (18.596,23.678,67.211)
H8: (15.748,24.866,62.500)
N9: (17.798,24.663,63.088)
H1: (21.447,24.151,59.738)
O5': (18.581,21.064,66.686)
O3': (16.895,25.451,67.410)
H5'1: (16.903,21.799,67.601)
OP2: (20.893,21.633,67.512)
OP3: (19.111,21.666,69.129)
C3': (16.599,24.277,66.612)
H21: (22.682,24.209,63.003)
H22: (23.066,24.084,61.325)
C5': (17.422,21.931,66.667)
O6: (19.233,24.313,58.706)
H2': (15.731,23.934,64.685)
H3': (15.743,23.765,67.016)
O4': (18.384,23.576,65.154)
C8: (16.761,24.737,62.180)
C2: (21.070,24.295,61.744)
N7: (17.116,24.640,60.956)
C6: (19.430,24.357,59.918)
C5: (18.474,24.506,61.001)
C4: (18.914,24.527,62.312)
C1': (17.739,24.726,64.570)
HO'2: (14.838,25.887,65.567)
P: (19.618,20.997,67.910)
C4': (17.851,23.393,66.491)
C2': (16.335,24.683,65.166)
H5'2: (16.815,21.629,65.831)
O2': (15.644,25.922,65.048)
N1: (20.728,24.258,60.420)
N2: (22.392,24.186,62.050)
N3: (20.205,24.428,62.715)
H1': (18.224,25.638,64.858)
H4': (18.596,23.678,67.211)
H8: (15.748,24.866,62.500)
N9: (17.798,24.663,63.088)
H1: (21.447,24.151,59.738)
O5': (18.581,21.064,66.686)
O3': (16.895,25.451,67.410)
H5'1: (16.903,21.799,67.601)
OP1: (15.116,24.918,69.175)
OP2: (16.196,27.073,69.200)
O5': (17.554,24.991,69.829)
C3': (20.898,26.791,69.535)
C1': (21.805,24.589,69.335)
C5': (18.694,25.748,70.303)
H2': (22.975,26.328,69.944)
O2: (24.574,24.363,69.190)
H3': (21.227,27.255,68.621)
O4': (20.376,24.479,69.140)
C2: (23.971,24.366,68.116)
C6: (21.944,24.532,66.810)
C5: (22.626,24.404,65.656)
C4: (24.057,24.243,65.783)
HO'2: (21.867,26.523,71.946)
P: (16.389,25.631,68.924)
C4': (19.771,25.794,69.207)
H5'1: (19.079,25.234,71.166)
H5'2: (18.341,26.730,70.557)
O2': (21.865,25.677,71.493)
N1: (22.565,24.499,68.053)
N3: (24.657,24.234,66.936)
N4: (24.828,24.097,64.670)
H1': (22.164,23.770,69.925)
H4': (19.341,26.034,68.252)
H6: (20.879,24.660,66.786)
H5: (22.092,24.424,64.732)
H42: (25.813,23.989,64.762)
H41: (24.406,24.098,63.769)
O3': (20.526,27.817,70.494)
C2': (22.004,25.898,70.093)
OP2: (16.196,27.073,69.200)
O5': (17.554,24.991,69.829)
C3': (20.898,26.791,69.535)
C1': (21.805,24.589,69.335)
C5': (18.694,25.748,70.303)
H2': (22.975,26.328,69.944)
O2: (24.574,24.363,69.190)
H3': (21.227,27.255,68.621)
O4': (20.376,24.479,69.140)
C2: (23.971,24.366,68.116)
C6: (21.944,24.532,66.810)
C5: (22.626,24.404,65.656)
C4: (24.057,24.243,65.783)
HO'2: (21.867,26.523,71.946)
P: (16.389,25.631,68.924)
C4': (19.771,25.794,69.207)
H5'1: (19.079,25.234,71.166)
H5'2: (18.341,26.730,70.557)
O2': (21.865,25.677,71.493)
N1: (22.565,24.499,68.053)
N3: (24.657,24.234,66.936)
N4: (24.828,24.097,64.670)
H1': (22.164,23.770,69.925)
H4': (19.341,26.034,68.252)
H6: (20.879,24.660,66.786)
H5: (22.092,24.424,64.732)
H42: (25.813,23.989,64.762)
H41: (24.406,24.098,63.769)
O3': (20.526,27.817,70.494)
C2': (22.004,25.898,70.093)
Image (generated by PyMOL):