Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:133:144
Extra
PDB:
ATOM 1 O3' A A 32 37.120 -19.923 93.610 1.00 33.59 O
ATOM 2 P C A 33 37.698 -20.704 92.333 1.00 38.89 P
ATOM 3 OP1 C A 33 36.623 -20.762 91.349 1.00 38.74 O
ATOM 4 OP2 C A 33 38.264 -21.985 92.834 1.00 39.06 O
ATOM 5 O5' C A 33 38.867 -19.710 91.807 1.00 38.75 O
ATOM 6 C5' C A 33 38.560 -18.364 91.494 1.00 38.62 C
ATOM 7 C4' C A 33 39.778 -17.509 91.234 1.00 38.55 C
ATOM 8 O4' C A 33 40.613 -17.470 92.393 1.00 38.75 O
ATOM 9 C3' C A 33 40.697 -17.974 90.131 1.00 38.41 C
ATOM 10 O3' C A 33 40.249 -17.614 88.860 1.00 38.20 O
ATOM 11 C2' C A 33 42.028 -17.344 90.484 1.00 38.46 C
ATOM 12 O2' C A 33 42.067 -15.985 90.090 1.00 38.34 O
ATOM 13 C1' C A 33 41.986 -17.430 92.002 1.00 38.70 C
ATOM 14 N1 C A 33 42.657 -18.668 92.466 1.00 38.86 N
ATOM 15 C2 C A 33 44.010 -18.755 92.288 1.00 38.87 C
ATOM 16 O2 C A 33 44.645 -17.813 91.834 1.00 38.76 O
ATOM 17 N3 C A 33 44.639 -19.873 92.650 1.00 39.01 N
ATOM 18 C4 C A 33 43.972 -20.881 93.139 1.00 39.14 C
ATOM 19 N4 C A 33 44.689 -21.948 93.457 1.00 39.29 N
ATOM 20 C5 C A 33 42.581 -20.839 93.313 1.00 39.13 C
ATOM 21 C6 C A 33 41.967 -19.723 92.963 1.00 38.98 C
ATOM 22 P U A 34 40.175 -18.726 87.745 1.00 32.32 P
ATOM 23 OP1 U A 34 40.268 -18.041 86.462 1.00 32.11 O
ATOM 24 OP2 U A 34 38.998 -19.529 88.030 1.00 32.39 O
ATOM 25 O5' U A 34 41.464 -19.585 88.004 1.00 32.42 O
TER
ATOM 1 O3' U B 43 45.972 -30.596 93.930 1.00 35.25 O
ATOM 2 P C B 44 46.560 -30.312 95.401 1.00 36.68 P
ATOM 3 OP1 C B 44 47.830 -31.032 95.498 1.00 36.86 O
ATOM 4 OP2 C B 44 45.490 -30.629 96.381 1.00 36.86 O
ATOM 5 O5' C B 44 46.833 -28.760 95.346 1.00 36.49 O
ATOM 6 C5' C B 44 47.636 -28.228 94.307 1.00 36.28 C
ATOM 7 C4' C B 44 47.275 -26.806 94.018 1.00 36.06 C
ATOM 8 O4' C B 44 45.940 -26.747 93.508 1.00 35.90 O
ATOM 9 C3' C B 44 47.246 -25.891 95.214 1.00 36.18 C
ATOM 10 O3' C B 44 48.539 -25.438 95.570 1.00 36.27 O
ATOM 11 C2' C B 44 46.298 -24.784 94.763 1.00 35.95 C
ATOM 12 O2' C B 44 46.948 -23.887 93.906 1.00 35.74 O
ATOM 13 C1' C B 44 45.312 -25.561 93.928 1.00 35.83 C
ATOM 14 N1 C B 44 44.124 -25.911 94.690 1.00 35.95 N
ATOM 15 C2 C B 44 43.021 -25.080 94.573 1.00 35.82 C
ATOM 16 O2 C B 44 43.088 -24.098 93.837 1.00 35.60 O
ATOM 17 N3 C B 44 41.904 -25.367 95.248 1.00 35.94 N
ATOM 18 C4 C B 44 41.850 -26.431 96.005 1.00 36.18 C
ATOM 19 N4 C B 44 40.727 -26.675 96.675 1.00 36.30 N
ATOM 20 C5 C B 44 42.983 -27.272 96.113 1.00 36.32 C
ATOM 21 C6 C B 44 44.105 -27.014 95.453 1.00 36.21 C
ATOM 22 P A B 45 48.882 -25.146 97.092 1.00 32.89 P
ATOM 23 OP1 A B 45 47.772 -24.343 97.642 1.00 32.87 O
ATOM 24 OP2 A B 45 50.276 -24.564 97.148 1.00 32.94 O
ATOM 25 O5' A B 45 48.846 -26.578 97.735 1.00 33.16 O
TER
ATOM 2 P C A 33 37.698 -20.704 92.333 1.00 38.89 P
ATOM 3 OP1 C A 33 36.623 -20.762 91.349 1.00 38.74 O
ATOM 4 OP2 C A 33 38.264 -21.985 92.834 1.00 39.06 O
ATOM 5 O5' C A 33 38.867 -19.710 91.807 1.00 38.75 O
ATOM 6 C5' C A 33 38.560 -18.364 91.494 1.00 38.62 C
ATOM 7 C4' C A 33 39.778 -17.509 91.234 1.00 38.55 C
ATOM 8 O4' C A 33 40.613 -17.470 92.393 1.00 38.75 O
ATOM 9 C3' C A 33 40.697 -17.974 90.131 1.00 38.41 C
ATOM 10 O3' C A 33 40.249 -17.614 88.860 1.00 38.20 O
ATOM 11 C2' C A 33 42.028 -17.344 90.484 1.00 38.46 C
ATOM 12 O2' C A 33 42.067 -15.985 90.090 1.00 38.34 O
ATOM 13 C1' C A 33 41.986 -17.430 92.002 1.00 38.70 C
ATOM 14 N1 C A 33 42.657 -18.668 92.466 1.00 38.86 N
ATOM 15 C2 C A 33 44.010 -18.755 92.288 1.00 38.87 C
ATOM 16 O2 C A 33 44.645 -17.813 91.834 1.00 38.76 O
ATOM 17 N3 C A 33 44.639 -19.873 92.650 1.00 39.01 N
ATOM 18 C4 C A 33 43.972 -20.881 93.139 1.00 39.14 C
ATOM 19 N4 C A 33 44.689 -21.948 93.457 1.00 39.29 N
ATOM 20 C5 C A 33 42.581 -20.839 93.313 1.00 39.13 C
ATOM 21 C6 C A 33 41.967 -19.723 92.963 1.00 38.98 C
ATOM 22 P U A 34 40.175 -18.726 87.745 1.00 32.32 P
ATOM 23 OP1 U A 34 40.268 -18.041 86.462 1.00 32.11 O
ATOM 24 OP2 U A 34 38.998 -19.529 88.030 1.00 32.39 O
ATOM 25 O5' U A 34 41.464 -19.585 88.004 1.00 32.42 O
TER
ATOM 1 O3' U B 43 45.972 -30.596 93.930 1.00 35.25 O
ATOM 2 P C B 44 46.560 -30.312 95.401 1.00 36.68 P
ATOM 3 OP1 C B 44 47.830 -31.032 95.498 1.00 36.86 O
ATOM 4 OP2 C B 44 45.490 -30.629 96.381 1.00 36.86 O
ATOM 5 O5' C B 44 46.833 -28.760 95.346 1.00 36.49 O
ATOM 6 C5' C B 44 47.636 -28.228 94.307 1.00 36.28 C
ATOM 7 C4' C B 44 47.275 -26.806 94.018 1.00 36.06 C
ATOM 8 O4' C B 44 45.940 -26.747 93.508 1.00 35.90 O
ATOM 9 C3' C B 44 47.246 -25.891 95.214 1.00 36.18 C
ATOM 10 O3' C B 44 48.539 -25.438 95.570 1.00 36.27 O
ATOM 11 C2' C B 44 46.298 -24.784 94.763 1.00 35.95 C
ATOM 12 O2' C B 44 46.948 -23.887 93.906 1.00 35.74 O
ATOM 13 C1' C B 44 45.312 -25.561 93.928 1.00 35.83 C
ATOM 14 N1 C B 44 44.124 -25.911 94.690 1.00 35.95 N
ATOM 15 C2 C B 44 43.021 -25.080 94.573 1.00 35.82 C
ATOM 16 O2 C B 44 43.088 -24.098 93.837 1.00 35.60 O
ATOM 17 N3 C B 44 41.904 -25.367 95.248 1.00 35.94 N
ATOM 18 C4 C B 44 41.850 -26.431 96.005 1.00 36.18 C
ATOM 19 N4 C B 44 40.727 -26.675 96.675 1.00 36.30 N
ATOM 20 C5 C B 44 42.983 -27.272 96.113 1.00 36.32 C
ATOM 21 C6 C B 44 44.105 -27.014 95.453 1.00 36.21 C
ATOM 22 P A B 45 48.882 -25.146 97.092 1.00 32.89 P
ATOM 23 OP1 A B 45 47.772 -24.343 97.642 1.00 32.87 O
ATOM 24 OP2 A B 45 50.276 -24.564 97.148 1.00 32.94 O
ATOM 25 O5' A B 45 48.846 -26.578 97.735 1.00 33.16 O
TER
Atoms:
C2: (44.010,-18.755,92.288)
OP1: (36.623,-20.762,91.349)
OP2: (38.264,-21.985,92.834)
C4: (43.972,-20.881,93.139)
O5': (38.867,-19.710,91.807)
C3': (40.697,-17.974,90.131)
C1': (41.986,-17.430,92.002)
O4': (40.613,-17.470,92.393)
C5': (38.560,-18.364,91.494)
P: (37.698,-20.704,92.333)
O2: (44.645,-17.813,91.834)
C4': (39.778,-17.509,91.234)
C2': (42.028,-17.344,90.484)
O2': (42.067,-15.985,90.090)
N1: (42.657,-18.668,92.466)
N3: (44.639,-19.873,92.650)
N4: (44.689,-21.948,93.457)
C6: (41.967,-19.723,92.963)
C5: (42.581,-20.839,93.313)
O3': (40.249,-17.614,88.860)
OP1: (36.623,-20.762,91.349)
OP2: (38.264,-21.985,92.834)
C4: (43.972,-20.881,93.139)
O5': (38.867,-19.710,91.807)
C3': (40.697,-17.974,90.131)
C1': (41.986,-17.430,92.002)
O4': (40.613,-17.470,92.393)
C5': (38.560,-18.364,91.494)
P: (37.698,-20.704,92.333)
O2: (44.645,-17.813,91.834)
C4': (39.778,-17.509,91.234)
C2': (42.028,-17.344,90.484)
O2': (42.067,-15.985,90.090)
N1: (42.657,-18.668,92.466)
N3: (44.639,-19.873,92.650)
N4: (44.689,-21.948,93.457)
C6: (41.967,-19.723,92.963)
C5: (42.581,-20.839,93.313)
O3': (40.249,-17.614,88.860)
C2: (43.021,-25.080,94.573)
OP1: (47.830,-31.032,95.498)
OP2: (45.490,-30.629,96.381)
C4: (41.850,-26.431,96.005)
O5': (46.833,-28.760,95.346)
C3': (47.246,-25.891,95.214)
C1': (45.312,-25.561,93.928)
O4': (45.940,-26.747,93.508)
C5': (47.636,-28.228,94.307)
P: (46.560,-30.312,95.401)
O2: (43.088,-24.098,93.837)
C4': (47.275,-26.806,94.018)
C2': (46.298,-24.784,94.763)
O2': (46.948,-23.887,93.906)
N1: (44.124,-25.911,94.690)
N3: (41.904,-25.367,95.248)
N4: (40.727,-26.675,96.675)
C6: (44.105,-27.014,95.453)
C5: (42.983,-27.272,96.113)
O3': (48.539,-25.438,95.570)
OP1: (47.830,-31.032,95.498)
OP2: (45.490,-30.629,96.381)
C4: (41.850,-26.431,96.005)
O5': (46.833,-28.760,95.346)
C3': (47.246,-25.891,95.214)
C1': (45.312,-25.561,93.928)
O4': (45.940,-26.747,93.508)
C5': (47.636,-28.228,94.307)
P: (46.560,-30.312,95.401)
O2: (43.088,-24.098,93.837)
C4': (47.275,-26.806,94.018)
C2': (46.298,-24.784,94.763)
O2': (46.948,-23.887,93.906)
N1: (44.124,-25.911,94.690)
N3: (41.904,-25.367,95.248)
N4: (40.727,-26.675,96.675)
C6: (44.105,-27.014,95.453)
C5: (42.983,-27.272,96.113)
O3': (48.539,-25.438,95.570)
Image (generated by PyMOL):