ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01300:01272

Extra

PDB:
ATOM 1 O3' G A1299 17.988 141.264 54.946 1.00 48.42 O
ATOM 2 P A A1300 18.733 141.637 53.574 1.00 50.08 P
ATOM 3 OP1 A A1300 19.987 142.380 53.877 1.00 50.78 O
ATOM 4 OP2 A A1300 17.735 142.236 52.650 1.00 49.63 O
ATOM 5 O5' A A1300 19.142 140.205 53.023 1.00 46.88 O
ATOM 6 C5' A A1300 20.063 139.394 53.759 1.00 45.50 C
ATOM 7 C4' A A1300 19.758 137.935 53.554 1.00 47.12 C
ATOM 8 O4' A A1300 18.580 137.544 54.318 1.00 48.30 O
ATOM 9 C3' A A1300 19.492 137.514 52.117 1.00 45.94 C
ATOM 10 O3' A A1300 19.987 136.206 51.958 1.00 45.32 O
ATOM 11 C2' A A1300 17.968 137.473 52.059 1.00 46.34 C
ATOM 12 O2' A A1300 17.501 136.583 51.066 1.00 46.60 O
ATOM 13 C1' A A1300 17.638 136.942 53.453 1.00 45.74 C
ATOM 14 N9 A A1300 16.297 137.260 53.943 1.00 43.93 N
ATOM 15 C8 A A1300 15.848 138.429 54.510 1.00 43.91 C
ATOM 16 N7 A A1300 14.593 138.383 54.890 1.00 43.16 N
ATOM 17 C5 A A1300 14.187 137.103 54.543 1.00 41.10 C
ATOM 18 C6 A A1300 12.970 136.427 54.698 1.00 39.58 C
ATOM 19 N6 A A1300 11.893 136.962 55.278 1.00 39.95 N
ATOM 20 N1 A A1300 12.893 135.161 54.240 1.00 39.56 N
ATOM 21 C2 A A1300 13.975 134.617 53.674 1.00 41.47 C
ATOM 22 N3 A A1300 15.178 135.145 53.481 1.00 42.71 N
ATOM 23 C4 A A1300 15.219 136.406 53.944 1.00 42.67 C
ATOM 24 P C A1301 20.910 135.861 50.710 1.00 44.80 P
ATOM 25 OP1 C A1301 22.257 136.364 51.018 1.00 46.14 O
ATOM 26 OP2 C A1301 20.227 136.314 49.485 1.00 50.46 O
ATOM 27 O5' C A1301 20.898 134.275 50.687 1.00 43.97 O
TER

ATOM 1 O3' G B1271 6.056 128.049 54.126 1.00 46.61 O
ATOM 2 P A B1272 5.732 129.508 53.543 1.00 47.67 P
ATOM 3 OP1 A B1272 4.711 130.136 54.434 1.00 46.37 O
ATOM 4 OP2 A B1272 5.464 129.382 52.091 1.00 46.38 O
ATOM 5 O5' A B1272 7.097 130.304 53.723 1.00 48.05 O
ATOM 6 C5' A B1272 7.480 130.820 55.006 1.00 49.20 C
ATOM 7 C4' A B1272 8.548 131.873 54.851 1.00 47.91 C
ATOM 8 O4' A B1272 9.783 131.268 54.393 1.00 48.12 O
ATOM 9 C3' A B1272 8.260 132.937 53.814 1.00 48.13 C
ATOM 10 O3' A B1272 7.400 133.933 54.339 1.00 50.35 O
ATOM 11 C2' A B1272 9.652 133.465 53.513 1.00 47.32 C
ATOM 12 O2' A B1272 10.117 134.320 54.537 1.00 48.11 O
ATOM 13 C1' A B1272 10.468 132.173 53.546 1.00 47.11 C
ATOM 14 N9 A B1272 10.623 131.541 52.238 1.00 47.57 N
ATOM 15 C8 A B1272 9.905 130.491 51.715 1.00 47.32 C
ATOM 16 N7 A B1272 10.303 130.123 50.521 1.00 48.30 N
ATOM 17 C5 A B1272 11.350 130.988 50.236 1.00 47.23 C
ATOM 18 C6 A B1272 12.201 131.106 49.126 1.00 47.33 C
ATOM 19 N6 A B1272 12.144 130.306 48.060 1.00 46.37 N
ATOM 20 N1 A B1272 13.132 132.086 49.151 1.00 48.50 N
ATOM 21 C2 A B1272 13.201 132.879 50.230 1.00 47.47 C
ATOM 22 N3 A B1272 12.468 132.858 51.338 1.00 46.85 N
ATOM 23 C4 A B1272 11.549 131.876 51.278 1.00 47.79 C
ATOM 24 P U B1273 6.450 134.769 53.350 1.00 50.59 P
ATOM 25 OP1 U B1273 5.044 134.477 53.710 1.00 50.71 O
ATOM 26 OP2 U B1273 6.909 134.573 51.939 1.00 51.07 O
ATOM 27 O5' U B1273 6.746 136.277 53.753 1.00 50.44 O
TER

Atoms:
OP1: (19.987,142.380,53.877)
OP2: (17.735,142.236,52.650)
C3': (19.492,137.514,52.117)
C1': (17.638,136.942,53.453)
C5': (20.063,139.394,53.759)
O4': (18.580,137.544,54.318)
C8: (15.848,138.429,54.510)
O2': (17.501,136.583,51.066)
C6: (12.970,136.427,54.698)
C5: (14.187,137.103,54.543)
C4: (15.219,136.406,53.944)
P: (18.733,141.637,53.574)
C4': (19.758,137.935,53.554)
C2': (17.968,137.473,52.059)
C2: (13.975,134.617,53.674)
N1: (12.893,135.161,54.240)
N3: (15.178,135.145,53.481)
N6: (11.893,136.962,55.278)
N7: (14.593,138.383,54.890)
N9: (16.297,137.260,53.943)
O5': (19.142,140.205,53.023)
O3': (19.987,136.206,51.958)
OP1: (4.711,130.136,54.434)
OP2: (5.464,129.382,52.091)
C3': (8.260,132.937,53.814)
C1': (10.468,132.173,53.546)
C5': (7.480,130.820,55.006)
O4': (9.783,131.268,54.393)
C8: (9.905,130.491,51.715)
O2': (10.117,134.320,54.537)
C6: (12.201,131.106,49.126)
C5: (11.350,130.988,50.236)
C4: (11.549,131.876,51.278)
P: (5.732,129.508,53.543)
C4': (8.548,131.873,54.851)
C2': (9.652,133.465,53.513)
C2: (13.201,132.879,50.230)
N1: (13.132,132.086,49.151)
N3: (12.468,132.858,51.338)
N6: (12.144,130.306,48.060)
N7: (10.303,130.123,50.521)
N9: (10.623,131.541,52.238)
O5': (7.097,130.304,53.723)
O3': (7.400,133.933,54.339)
Image (generated by PyMOL):
PyMOL image
show in jmol