Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02608:02644
Extra
PDB:
ATOM 1 O3' A A2607 54.914 140.972 149.384 1.00 95.48 O
ATOM 2 P C A2608 54.616 139.421 149.700 1.00101.11 P
ATOM 3 OP1 C A2608 55.917 138.788 150.059 1.00100.73 O
ATOM 4 OP2 C A2608 53.810 138.850 148.583 1.00100.97 O
ATOM 5 O5' C A2608 53.691 139.482 151.003 1.00101.21 O
ATOM 6 C5' C A2608 54.151 140.148 152.197 1.00100.55 C
ATOM 7 C4' C A2608 52.989 140.534 153.092 1.00100.45 C
ATOM 8 O4' C A2608 52.110 141.489 152.433 1.00 99.48 O
ATOM 9 C3' C A2608 52.016 139.446 153.504 1.00100.37 C
ATOM 10 O3' C A2608 52.533 138.566 154.492 1.00 99.86 O
ATOM 11 C2' C A2608 50.856 140.279 154.040 1.00100.29 C
ATOM 12 O2' C A2608 51.078 140.805 155.338 1.00100.49 O
ATOM 13 C1' C A2608 50.815 141.419 153.023 1.00 98.99 C
ATOM 14 N1 C A2608 49.796 141.151 151.986 1.00 97.07 N
ATOM 15 C2 C A2608 48.486 141.627 152.191 1.00 96.13 C
ATOM 16 O2 C A2608 48.238 142.306 153.202 1.00 96.03 O
ATOM 17 N3 C A2608 47.526 141.337 151.285 1.00 95.23 N
ATOM 18 C4 C A2608 47.825 140.615 150.205 1.00 95.30 C
ATOM 19 N4 C A2608 46.839 140.337 149.351 1.00 94.86 N
ATOM 20 C5 C A2608 49.149 140.141 149.954 1.00 95.87 C
ATOM 21 C6 C A2608 50.095 140.431 150.861 1.00 96.54 C
ATOM 22 P G A2609 51.947 137.074 154.603 1.00 99.03 P
ATOM 23 OP1 G A2609 52.553 136.446 155.807 1.00 99.48 O
ATOM 24 OP2 G A2609 52.097 136.415 153.277 1.00 98.69 O
ATOM 25 O5' G A2609 50.391 137.290 154.869 1.00 96.21 O
TER
ATOM 1 O3' C B2643 38.805 137.896 144.008 1.00 64.38 O
ATOM 2 P A B2644 39.237 139.302 143.355 1.00 65.85 P
ATOM 3 OP1 A B2644 38.002 140.126 143.294 1.00 66.08 O
ATOM 4 OP2 A B2644 40.012 139.044 142.116 1.00 66.75 O
ATOM 5 O5' A B2644 40.237 139.949 144.410 1.00 63.37 O
ATOM 6 C5' A B2644 39.786 140.327 145.721 1.00 61.33 C
ATOM 7 C4' A B2644 40.967 140.681 146.586 1.00 59.95 C
ATOM 8 O4' A B2644 41.836 139.528 146.688 1.00 60.09 O
ATOM 9 C3' A B2644 41.858 141.783 146.037 1.00 59.57 C
ATOM 10 O3' A B2644 41.351 143.063 146.406 1.00 55.74 O
ATOM 11 C2' A B2644 43.193 141.486 146.710 1.00 61.40 C
ATOM 12 O2' A B2644 43.269 141.970 148.034 1.00 62.85 O
ATOM 13 C1' A B2644 43.186 139.954 146.740 1.00 61.88 C
ATOM 14 N9 A B2644 43.909 139.343 145.626 1.00 63.99 N
ATOM 15 C8 A B2644 43.437 139.028 144.373 1.00 64.65 C
ATOM 16 N7 A B2644 44.343 138.501 143.585 1.00 65.40 N
ATOM 17 C5 A B2644 45.487 138.463 144.371 1.00 65.79 C
ATOM 18 C6 A B2644 46.793 138.022 144.113 1.00 66.42 C
ATOM 19 N6 A B2644 47.183 137.526 142.938 1.00 68.59 N
ATOM 20 N1 A B2644 47.699 138.114 145.114 1.00 65.66 N
ATOM 21 C2 A B2644 47.306 138.624 146.288 1.00 65.17 C
ATOM 22 N3 A B2644 46.108 139.080 146.649 1.00 64.78 N
ATOM 23 C4 A B2644 45.232 138.971 145.633 1.00 65.09 C
ATOM 24 P C B2645 40.807 144.069 145.279 1.00 52.96 P
ATOM 25 OP1 C B2645 40.176 145.208 145.993 1.00 53.17 O
ATOM 26 OP2 C B2645 40.017 143.311 144.273 1.00 54.09 O
ATOM 27 O5' C B2645 42.133 144.597 144.583 1.00 51.19 O
TER
ATOM 2 P C A2608 54.616 139.421 149.700 1.00101.11 P
ATOM 3 OP1 C A2608 55.917 138.788 150.059 1.00100.73 O
ATOM 4 OP2 C A2608 53.810 138.850 148.583 1.00100.97 O
ATOM 5 O5' C A2608 53.691 139.482 151.003 1.00101.21 O
ATOM 6 C5' C A2608 54.151 140.148 152.197 1.00100.55 C
ATOM 7 C4' C A2608 52.989 140.534 153.092 1.00100.45 C
ATOM 8 O4' C A2608 52.110 141.489 152.433 1.00 99.48 O
ATOM 9 C3' C A2608 52.016 139.446 153.504 1.00100.37 C
ATOM 10 O3' C A2608 52.533 138.566 154.492 1.00 99.86 O
ATOM 11 C2' C A2608 50.856 140.279 154.040 1.00100.29 C
ATOM 12 O2' C A2608 51.078 140.805 155.338 1.00100.49 O
ATOM 13 C1' C A2608 50.815 141.419 153.023 1.00 98.99 C
ATOM 14 N1 C A2608 49.796 141.151 151.986 1.00 97.07 N
ATOM 15 C2 C A2608 48.486 141.627 152.191 1.00 96.13 C
ATOM 16 O2 C A2608 48.238 142.306 153.202 1.00 96.03 O
ATOM 17 N3 C A2608 47.526 141.337 151.285 1.00 95.23 N
ATOM 18 C4 C A2608 47.825 140.615 150.205 1.00 95.30 C
ATOM 19 N4 C A2608 46.839 140.337 149.351 1.00 94.86 N
ATOM 20 C5 C A2608 49.149 140.141 149.954 1.00 95.87 C
ATOM 21 C6 C A2608 50.095 140.431 150.861 1.00 96.54 C
ATOM 22 P G A2609 51.947 137.074 154.603 1.00 99.03 P
ATOM 23 OP1 G A2609 52.553 136.446 155.807 1.00 99.48 O
ATOM 24 OP2 G A2609 52.097 136.415 153.277 1.00 98.69 O
ATOM 25 O5' G A2609 50.391 137.290 154.869 1.00 96.21 O
TER
ATOM 1 O3' C B2643 38.805 137.896 144.008 1.00 64.38 O
ATOM 2 P A B2644 39.237 139.302 143.355 1.00 65.85 P
ATOM 3 OP1 A B2644 38.002 140.126 143.294 1.00 66.08 O
ATOM 4 OP2 A B2644 40.012 139.044 142.116 1.00 66.75 O
ATOM 5 O5' A B2644 40.237 139.949 144.410 1.00 63.37 O
ATOM 6 C5' A B2644 39.786 140.327 145.721 1.00 61.33 C
ATOM 7 C4' A B2644 40.967 140.681 146.586 1.00 59.95 C
ATOM 8 O4' A B2644 41.836 139.528 146.688 1.00 60.09 O
ATOM 9 C3' A B2644 41.858 141.783 146.037 1.00 59.57 C
ATOM 10 O3' A B2644 41.351 143.063 146.406 1.00 55.74 O
ATOM 11 C2' A B2644 43.193 141.486 146.710 1.00 61.40 C
ATOM 12 O2' A B2644 43.269 141.970 148.034 1.00 62.85 O
ATOM 13 C1' A B2644 43.186 139.954 146.740 1.00 61.88 C
ATOM 14 N9 A B2644 43.909 139.343 145.626 1.00 63.99 N
ATOM 15 C8 A B2644 43.437 139.028 144.373 1.00 64.65 C
ATOM 16 N7 A B2644 44.343 138.501 143.585 1.00 65.40 N
ATOM 17 C5 A B2644 45.487 138.463 144.371 1.00 65.79 C
ATOM 18 C6 A B2644 46.793 138.022 144.113 1.00 66.42 C
ATOM 19 N6 A B2644 47.183 137.526 142.938 1.00 68.59 N
ATOM 20 N1 A B2644 47.699 138.114 145.114 1.00 65.66 N
ATOM 21 C2 A B2644 47.306 138.624 146.288 1.00 65.17 C
ATOM 22 N3 A B2644 46.108 139.080 146.649 1.00 64.78 N
ATOM 23 C4 A B2644 45.232 138.971 145.633 1.00 65.09 C
ATOM 24 P C B2645 40.807 144.069 145.279 1.00 52.96 P
ATOM 25 OP1 C B2645 40.176 145.208 145.993 1.00 53.17 O
ATOM 26 OP2 C B2645 40.017 143.311 144.273 1.00 54.09 O
ATOM 27 O5' C B2645 42.133 144.597 144.583 1.00 51.19 O
TER
Atoms:
C2: (48.486,141.627,152.191)
OP1: (55.917,138.788,150.059)
OP2: (53.810,138.850,148.583)
C4: (47.825,140.615,150.205)
O5': (53.691,139.482,151.003)
C3': (52.016,139.446,153.504)
C1': (50.815,141.419,153.023)
O4': (52.110,141.489,152.433)
C5': (54.151,140.148,152.197)
P: (54.616,139.421,149.700)
O2: (48.238,142.306,153.202)
C4': (52.989,140.534,153.092)
C2': (50.856,140.279,154.040)
O2': (51.078,140.805,155.338)
N1: (49.796,141.151,151.986)
N3: (47.526,141.337,151.285)
N4: (46.839,140.337,149.351)
C6: (50.095,140.431,150.861)
C5: (49.149,140.141,149.954)
O3': (52.533,138.566,154.492)
OP1: (55.917,138.788,150.059)
OP2: (53.810,138.850,148.583)
C4: (47.825,140.615,150.205)
O5': (53.691,139.482,151.003)
C3': (52.016,139.446,153.504)
C1': (50.815,141.419,153.023)
O4': (52.110,141.489,152.433)
C5': (54.151,140.148,152.197)
P: (54.616,139.421,149.700)
O2: (48.238,142.306,153.202)
C4': (52.989,140.534,153.092)
C2': (50.856,140.279,154.040)
O2': (51.078,140.805,155.338)
N1: (49.796,141.151,151.986)
N3: (47.526,141.337,151.285)
N4: (46.839,140.337,149.351)
C6: (50.095,140.431,150.861)
C5: (49.149,140.141,149.954)
O3': (52.533,138.566,154.492)
OP1: (38.002,140.126,143.294)
OP2: (40.012,139.044,142.116)
C3': (41.858,141.783,146.037)
C1': (43.186,139.954,146.740)
C5': (39.786,140.327,145.721)
O4': (41.836,139.528,146.688)
C8: (43.437,139.028,144.373)
O2': (43.269,141.970,148.034)
C6: (46.793,138.022,144.113)
C5: (45.487,138.463,144.371)
C4: (45.232,138.971,145.633)
P: (39.237,139.302,143.355)
C4': (40.967,140.681,146.586)
C2': (43.193,141.486,146.710)
C2: (47.306,138.624,146.288)
N1: (47.699,138.114,145.114)
N3: (46.108,139.080,146.649)
N6: (47.183,137.526,142.938)
N7: (44.343,138.501,143.585)
N9: (43.909,139.343,145.626)
O5': (40.237,139.949,144.410)
O3': (41.351,143.063,146.406)
OP2: (40.012,139.044,142.116)
C3': (41.858,141.783,146.037)
C1': (43.186,139.954,146.740)
C5': (39.786,140.327,145.721)
O4': (41.836,139.528,146.688)
C8: (43.437,139.028,144.373)
O2': (43.269,141.970,148.034)
C6: (46.793,138.022,144.113)
C5: (45.487,138.463,144.371)
C4: (45.232,138.971,145.633)
P: (39.237,139.302,143.355)
C4': (40.967,140.681,146.586)
C2': (43.193,141.486,146.710)
C2: (47.306,138.624,146.288)
N1: (47.699,138.114,145.114)
N3: (46.108,139.080,146.649)
N6: (47.183,137.526,142.938)
N7: (44.343,138.501,143.585)
N9: (43.909,139.343,145.626)
O5': (40.237,139.949,144.410)
O3': (41.351,143.063,146.406)
Image (generated by PyMOL):